Blg00012.0 (mRNA) - B. lanceolatum

Overview
Name
Unique NameBlg00012.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000648:32581..33513+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00012.0 ID=Blg00012.0|Name=Blg00012.0|organism=Branchiostoma lanceolatum|type=mRNA|length=933bp|location=Sequence derived from alignment at Sc0000648:32581..33513+ (Branchiostoma lanceolatum)
ATGTTTTTATCCATAAATAGTTTCATCAGGTTCGTAAGTCACTGAATAAA AAGACTCCTTTTACACAACCAAAAGACTCTTTGTGCACAACCAAGCTTTT GGGAATGCATCTATAAGCTGTGACACCGGTGCTGCAGTGCAAAACGAACC TGTCATAATTGCCCTGAGGAAGGTGACAGACACGGAAACGCTGGTTGGTT TTGTACAAAAGAGACTTTTATTCATATCTTTTGATCTGTAAACTAATGGT CTTGTCCTTCAGGGCCCTGGAGCTGGCAGTGAAGCACAAGACACATGTGG ACACTGTGCTGGCCTTCAGTACCTGGAGAAGTTCAGCAGGAGTGAGAAGA ACAAACGCTTCCTGCAGTACGCAGAGGGGGTGAAACAATCATGATCACTG TCTTCTTTCTTTAAATGTTTCTTTCTTTTAAGTTTGTAGAGGGGGTGAGA CAGTCTTCTTTCTTTCTTTAGATGTTTCTTTCTTTATTACGCAGAGGGGG CGAGACAGTCATTGTCTTCTTTGTCTCTTTCCTTTTCTTTCTTGCCTTTT TCGACTTTTCTTTTTCCTTTTTCTTTACCTTTCTTCCTCCTTCCTGAGAC TGCCACCGTCTTCTTGTTTCTTTAAAGTTTCTTCTTCACTTCACTTTATT GTTTAACTAGTTGTTTAAGAAGGGCCACACGATGTTAACAGAGCATGCTC AAAGCACCGGATTTATCTATAGTAATTTTGGTAGGGGTCCTTCCCAACGG AATCGATCAAAACTCATATGTTATAAAGCATTGAGACAGTTTATGTGATA CAAATAGAAAAAAACAAATAAATAAGCTGTCTCCCTTTGTTCCCAGGTGG AGGTCGACTGGCAGAAGATCGAGGCGAAGATCGAGATGGAGCAGCAGAAA GAGCGGGAAATGGCCGCCACGGCCAGGCGGTAA

Coding sequence (CDS) from alignment at Sc0000648:32581..33513+

>Blg00012.0 ID=Blg00012.0|Name=|organism=Branchiostoma lanceolatum|type=CDS|length=237bp|location=Sequence derived from alignment at Sc0000648:32581..33513+ (Branchiostoma lanceolatum)
ATGTTTTTATCCATAAATAGTTTCATCAGGTTCGGCCCTGGAGCTGGCAG
TGAAGCACAAGACACATGTGGACACTGTGCTGGCCTTCAGTACCTGGAGA
AGTTCAGCAGGAGTGAGAAGAACAAACGCTTCCTGCAGTACGCAGAGGGG
GTGGAGGTCGACTGGCAGAAGATCGAGGCGAAGATCGAGATGGAGCAGCA
GAAAGAGCGGGAAATGGCCGCCACGGCCAGGCGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00012.0Blg00012.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00012.0-exon-Sc0000648-1570713199:32581..32613Blg00012.0-exon-Sc0000648-1570713199:32581..32613Branchiostoma lanceolatumexon
Blg00012.0-exon-Sc0000648-1570713199:32843..32959Blg00012.0-exon-Sc0000648-1570713199:32843..32959Branchiostoma lanceolatumexon
Blg00012.0-exon-Sc0000648-1570713199:33427..33513Blg00012.0-exon-Sc0000648-1570713199:33427..33513Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000648genomeSc0000648:32581..33513 +
Spatial Expression
in the tripal_feature_cv_term.tpl.php
Properties
Property NameValue
GeneIDBlg00012