Blg00009.0 (mRNA) - B. lanceolatum

Overview
Name
Unique NameBlg00009.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000648:6039..7038-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00009.0 ID=Blg00009.0|Name=Blg00009.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1000bp|location=Sequence derived from alignment at Sc0000648:6039..7038- (Branchiostoma lanceolatum)
ATGTCATTCAGCCCCAGGGACAGGGGCACCAGTGTTGTTGGTGTGTCATA CAGGGACAGGGGCACCAGTGTTGTTGGTGTGTCATTCAGCACCAGGGACA GGGGCACCAGTCTTGTTGGTGTGTCATTCAGCACCAGGGACAGGGGCACC AGTCTTGTTGGTGTGTCATTCAGCACCAGGGACAGGGGCACCAGTCTTGT TGGTGTCTTTCAGTACCAGGGATGCGGAACCAGCGTTCTTGCCGTGTCAT TTAGAGGCAAGGTCACTGGCCTTGTTGCTGTAATGCTGTGATAGGGGCTC GGAGATGCTTCATATGCATGAGGAGATATTATATATAGCGTGTAGTAAAT GAGAAAATTCCTATGTGTTTACAGCAGGTGTTACTCGTGAAATGCCTTGT CCAATATCCAGACAATTAAGTGCTGTCGGCGTTAGCGTGTTGAGCTTAGC AGCGATCACAACCGGTTTTGGTGCGGCTCGAGATGGCGGATACTCCGTTA GAAGGTGCGGCAAAAGTACCCACAAGTGTGGCCTGGTATAACCCGCTGAA CTCTACGGCTACGTACACCCCACTGCGGTCTGCACCACCCCCTACCAACT ACCTGCTCCCAAGTGCTGCAGGAATGGCAACATCGTCTGCCAGAGAAGAT TTTGACGATGTGACTCTGATTTTAGGGCGTTCTCCCTCCGCAAAGTTCAC AAGGGCACCACCCCATTGCTCCGTAAAGTCTCCGAGGGCACCGCCTCAAT GCTCCGGAGACACTCCGAGGGCACCGCCATATCACTCCGAGCAAACTCCG AAGGCGCCGCTACATCACTCTGGGGGCACTCTGAGGGCACCGCTACATCA CTCCGGAGACACTCCGAGGGCACCTCCACATCACTCCGAAGACATTCCGA GGGCACTGCCACATCACTCCGGAGACACTCCGAGGGCACTGCCACATCAC TCCGAAGACATTCCGAGGGCACCATGTCATCGCTCCGGACAGACCGATGA

Coding sequence (CDS) from alignment at Sc0000648:6039..7038-

>Blg00009.0 ID=Blg00009.0|Name=|organism=Branchiostoma lanceolatum|type=CDS|length=705bp|location=Sequence derived from alignment at Sc0000648:6039..7038- (Branchiostoma lanceolatum)
ATGTCATTCAGCCCCAGGGACAGGGGCACCAGTGTTGTTGGTGTGTCATA
CAGGGACAGGGGCACCAGTGTTGTTGGTGTGTCATTCAGCACCAGGGACA
GGGGCACCAGTCTTGTTGGTGTGTCATTCAGCACCAGGGACAGGGGCACC
AGTCTTGTTGGTGTGTCATTCAGCACCAGGGACAGGGGCACCAGTCTTGT
TGGTGTCTTTCAGTACCAGGGATGCGGAACCAGCGTTCTTGCCGTGTCAT
TTAGAGGCAAGGTCACTGGCCTTGTTGCTGTAATGCTACAATTAAGTGCT
GTCGGCGTTAGCGTGTTGAGCTTAGCAGCGATCACAACCGGTTTTGGTGC
GGCTCGAGATGGCGGATACTCCGTTAGAAGGGCGTTCTCCCTCCGCAAAG
TTCACAAGGGCACCACCCCATTGCTCCGTAAAGTCTCCGAGGGCACCGCC
TCAATGCTCCGGAGACACTCCGAGGGCACCGCCATATCACTCCGAGCAAA
CTCCGAAGGCGCCGCTACATCACTCTGGGGGCACTCTGAGGGCACCGCTA
CATCACTCCGGAGACACTCCGAGGGCACCTCCACATCACTCCGAAGACAT
TCCGAGGGCACTGCCACATCACTCCGGAGACACTCCGAGGGCACTGCCAC
ATCACTCCGAAGACATTCCGAGGGCACCATGTCATCGCTCCGGACAGACC
GATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00009.0Blg00009.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00009.0-exon-Sc0000648-1570713199:6752..7038Blg00009.0-exon-Sc0000648-1570713199:6752..7038Branchiostoma lanceolatumexon
Blg00009.0-exon-Sc0000648-1570713199:6535..6627Blg00009.0-exon-Sc0000648-1570713199:6535..6627Branchiostoma lanceolatumexon
Blg00009.0-exon-Sc0000648-1570713199:6039..6363Blg00009.0-exon-Sc0000648-1570713199:6039..6363Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000648genomeSc0000648:6039..7038 -
Spatial Expression
in the tripal_feature_cv_term.tpl.php
Properties
Property NameValue
GeneIDBlg00009