Blg00008.0 (mRNA) - B. lanceolatum

Overview
Name
Unique NameBlg00008.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000648:35..1871+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00008.0 ID=Blg00008.0|Name=Blg00008.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1837bp|location=Sequence derived from alignment at Sc0000648:35..1871+ (Branchiostoma lanceolatum)
CCTGGTTAAACTACCCAAGAAAGGAGACCTGACCCAGTGTAAGAACTGGC GTGGCATAATGCTTCTCTCAGTCGCCAGCAAGCTACTATGCAGGATTATT CTTAACCGGACAGCAAAGGCCATGGAATGCAAACTCAGGGACAACCAAGC AGGCTTTCGTCCAAACAGATCCTGTAGTGACCAGATAGCAACTTTAAGAA TCATAGTAGAACAATCTGCAGAATTTAATTCACAGCTGTACGCCGTCTTT GTGGATTACGAGAAGGCCTTTGATTCGCTTGACAGGTCCACTCTCTGGAA CATCCTGGATCACTATGGAATCCCCACAAAAATCATCAGCATGGTCAAAG TCTTTTACAACAACTTTCAAGCACAAGTATCTCACGGAGGTGATCTCACA GAACCCTTCAACATGACCACCGGAGTGCGACAGGGATGTTTATTAAGCCC GCTACTGTTCATCACTGCACTCGACTGGGTAATGAGGGAAACCACGAAGG AAGGAAGAACAGGAATACAGTGGACACTGACAACTATGTTAGATGACTTA GACTTCGCGGATGATCTCGCCTTGTTGAGCCACAGCATCAGCCAGATGAG GACGAAAACCCAGAAGCTAGAAACAAACTCAAGCCGAGTGGGACTGAAAA TAAGCGCGTCCAAAACAAAGGAGATGAGGGTCAAAACAGTAGGGAATGCC AGACCCGTATGCTGCCAAGGAACGGAGCTAGAGTTGGTGAAGGAGTTCAC GTACCTGGGAAGTGTAATCAGCAATGATGGAGGGACCACCAAGGACGTAG AGGCACGCATAGGGAAGGCAAAGGCTTCCTTCGCTCAGCTTAAACCCATC TGGAGGGCTAGGAACATCTCGGTACGAACCAAACTGCGGATCCTTGAAGC CAATGTAAAGTCTGTCTTACTGTACGGTTGTGAAACCTGGGGATTGACTC AACTTAACATCAAGAAACTCCAAACCTTCATCAATTCAAGACTGCGTTTC ATCCTCGGCATCTGGTGGCCCAAGAAGATAAGCAACGTAGAGCTCCTTGA TAGAACAGGTCAGGAACCGGTCGAAGTAACCATAAGAAGAAGGAAGTGGA GGTGGGTTGGCCACACCTTGAGAAAGCCCCCAGCAGCCATTACAAGAACA GCATTAGAATGGAACCCTCAGGGGAAGAGAAAGAGGGGTAGACCAAGGCT CTCCTGGAGGAGAGGTGTCAGGAAAGACCTTGACAGCGCCAACACCTCAT GGCAAGAGGCAAAGAAGACCGCCGGAGACCGGAAGAGGTGGAGACTAACC ACTGAGGCCCTATGCTCCCGAAGGGGCGAAGAGGATTAAGTCAAGTTAAG TCAAGCATTTAATATCATATTTGGAAATTTATCTCGGGGGGTCCCTGTTA TATGTAATGTTATAATCCTGTTAGCCAAAACCTATATATACAAAAGGAGA AAGGCTGGTCATTTAAGTTTAAATTCCTTTACCAAATATGTTAACTTTTT TCAACAAGCAGAATATTTGATTGCAGCAAGAAGGGGAAAACTGGAAAAGC ACAGGGGGAAATGGGGGACTTTATGTTTATGTTTACAATAAGTTATTTTC AGTTGTGTTTCAGTTTTTCAAATGACACTATTATCTATGTTTTGATTGAA ATTATGTTATTGAATGGATAAAGTTTTCTTTTGTATATGACACTTGTTAC TGGACGGAGAAAGTTTTTGTTTTATATGACACTGTTTTTGTATGACAAGT TATTACTGACGTCAATTTGTATATGACACTTATTTATGTTACTGAACTAC TGACTGTGTTGTTTATGTTGTTGGATGGAAAATGAAT

Coding sequence (CDS) from alignment at Sc0000648:35..1871+

>Blg00008.0 ID=Blg00008.0|Name=|organism=Branchiostoma lanceolatum|type=CDS|length=1338bp|location=Sequence derived from alignment at Sc0000648:35..1871+ (Branchiostoma lanceolatum)
CTGGTTAAACTACCCAAGAAAGGAGACCTGACCCAGTGTAAGAACTGGCG
TGGCATAATGCTTCTCTCAGTCGCCAGCAAGCTACTATGCAGGATTATTC
TTAACCGGACAGCAAAGGCCATGGAATGCAAACTCAGGGACAACCAAGCA
GGCTTTCGTCCAAACAGATCCTGTAGTGACCAGATAGCAACTTTAAGAAT
CATAGTAGAACAATCTGCAGAATTTAATTCACAGCTGTACGCCGTCTTTG
TGGATTACGAGAAGGCCTTTGATTCGCTTGACAGGTCCACTCTCTGGAAC
ATCCTGGATCACTATGGAATCCCCACAAAAATCATCAGCATGGTCAAAGT
CTTTTACAACAACTTTCAAGCACAAGTATCTCACGGAGGTGATCTCACAG
AACCCTTCAACATGACCACCGGAGTGCGACAGGGATGTTTATTAAGCCCG
CTACTGTTCATCACTGCACTCGACTGGGTAATGAGGGAAACCACGAAGGA
AGGAAGAACAGGAATACAGTGGACACTGACAACTATGTTAGATGACTTAG
ACTTCGCGGATGATCTCGCCTTGTTGAGCCACAGCATCAGCCAGATGAGG
ACGAAAACCCAGAAGCTAGAAACAAACTCAAGCCGAGTGGGACTGAAAAT
AAGCGCGTCCAAAACAAAGGAGATGAGGGTCAAAACAGTAGGGAATGCCA
GACCCGTATGCTGCCAAGGAACGGAGCTAGAGTTGGTGAAGGAGTTCACG
TACCTGGGAAGTGTAATCAGCAATGATGGAGGGACCACCAAGGACGTAGA
GGCACGCATAGGGAAGGCAAAGGCTTCCTTCGCTCAGCTTAAACCCATCT
GGAGGGCTAGGAACATCTCGGTACGAACCAAACTGCGGATCCTTGAAGCC
AATGTAAAGTCTGTCTTACTGTACGGTTGTGAAACCTGGGGATTGACTCA
ACTTAACATCAAGAAACTCCAAACCTTCATCAATTCAAGACTGCGTTTCA
TCCTCGGCATCTGGTGGCCCAAGAAGATAAGCAACGTAGAGCTCCTTGAT
AGAACAGGTCAGGAACCGGTCGAAGTAACCATAAGAAGAAGGAAGTGGAG
GTGGGTTGGCCACACCTTGAGAAAGCCCCCAGCAGCCATTACAAGAACAG
CATTAGAATGGAACCCTCAGGGGAAGAGAAAGAGGGGTAGACCAAGGCTC
TCCTGGAGGAGAGGTGTCAGGAAAGACCTTGACAGCGCCAACACCTCATG
GCAAGAGGCAAAGAAGACCGCCGGAGACCGGAAGAGGTGGAGACTAACCA
CTGAGGCCCTATGCTCCCGAAGGGGCGAAGAGGATTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00008.0-exon-Sc0000648-1570713199:35..1871Blg00008.0-exon-Sc0000648-1570713199:35..1871Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00008.0Blg00008.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000648genomeSc0000648:35..1871 +
Spatial Expression
in the tripal_feature_cv_term.tpl.php
Properties
Property NameValue
GeneIDBlg00008