Blg00007.0 (mRNA) - B. lanceolatum

Overview
Name
Unique NameBlg00007.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000648:30342..31698+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00007.0 ID=Blg00007.0|Name=Blg00007.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1357bp|location=Sequence derived from alignment at Sc0000648:30342..31698+ (Branchiostoma lanceolatum)
ATGAAGGCCACCTCTAAGAGAGCGTCCGAAAAAGACCGCAGAGGTCGGCA CAAGGGTTCCGATCGCAAGGAACATGCCCACAACGACACATTCGTGAGGA GAGAAACAGCTGATGGCAACAACACCGGTCAGGAACCTGTGTGTGTGCAT GTTTGTTTCGCTGTGTGCTTGCAGCACTGCCATACACCAGTTACAATTTT TTCATCAGATTTCTGAAAGGTTTGCAAAGGGGTGACATCTGCCACCTCTG ATTGCCCTGTATCTTTGCTTCTTTCTCTCCTGCATCACTGTCCAACCAGA AAGCTTGGATATAACTGTTGGAGGCCTTACACAGACAATCTACTTTCATT ATTTGAAAAAGCAAAGTGAAGTCAGTGTACACAGCATATTATACTAGTAA CATTAACATGCTTTACTACATGTGCCCCTCTAGGACGAGGCTCTGTGGGC GTGTCTGGCTGCCATGGCTGCCTACGCAAAGGACCTGAACACTGCAGAGG TGGCCTACGCTGTAATAGATGAGGTGAGAATACAGTTTATTTCATGTTTT CTAGTTTAATTTACAAATTTACTGCTATTATCTATTCTAATGCCCCGATT TCTTAAATGATACAAAATATATCTATTATTATTGCATTAAGCAAAAAGTA AGCGAGCAAAAAAAATGTTAAGGTATTCCTATAGCCTTTTTGACACTGTA GAGGCAATGGGTTGTTATCCACTGTGTCTAGGGCACTGTATTCAAAGGTG GAGCTCAACTATCTCCTTCCTCTGCCTTTTACATGTACCTCCCCAACTGA AGTCAGGTACCCATTTTTACACCTGGGTGGAGTGAGGAAAGTCGTGTTAA GTGCCTTTCCCAGGGACACAACGTCTAGCCAGGAATGCCAGGAAACAAAC TGATAACCTCCTAATTTTGTGTCGATAGTAATCGACACCACACAACCAGT TGCAAAAAAGGTTTCTTTAACTAAGGCCACACCAATTTAATTTCTTGGTT AACAGATTTTTTTTTAATTTTAGCCCAAAAAATCATGATAACAGAAGGCT GGGGTGAAAACTTGCACCTGACCATGTTCACTCCCTGAACTTGTGTGCAC CAAAGTACTAGACTTTCCTCTGAGATTCTGTTTTCAAGTTGATTTTCCAA TCTAGCATTGTTTTTTAAAATACCGTTAACCAAGAAATTAAAATGGTGTG GCCTTAAAGTTAAAAGTCAAAATATTTTTCCCCTTCACAGGTGGACAAGG TGCAGTACATCCTCCACATTAAGGAGATCCCGTCCAAGGAGGCGAGAAAC GCTGAGATGGCGCTATTCTGTGGCAGTCCTCAAGACGCGGAGGGCATCCT CCTTTAG

Coding sequence (CDS) from alignment at Sc0000648:30342..31698+

>Blg00007.0 ID=Blg00007.0|Name=|organism=Branchiostoma lanceolatum|type=CDS|length=345bp|location=Sequence derived from alignment at Sc0000648:30342..31698+ (Branchiostoma lanceolatum)
ATGAAGGCCACCTCTAAGAGAGCGTCCGAAAAAGACCGCAGAGGTCGGCA
CAAGGGTTCCGATCGCAAGGAACATGCCCACAACGACACATTCGTGAGGA
GAGAAACAGCTGATGGCAACAACACCGGTCAGGAACCTGACGAGGCTCTG
TGGGCGTGTCTGGCTGCCATGGCTGCCTACGCAAAGGACCTGAACACTGC
AGAGGTGGCCTACGCTGTAATAGATGAGGTGGACAAGGTGCAGTACATCC
TCCACATTAAGGAGATCCCGTCCAAGGAGGCGAGAAACGCTGAGATGGCG
CTATTCTGTGGCAGTCCTCAAGACGCGGAGGGCATCCTCCTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00007.0Blg00007.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00007.0-exon-Sc0000648-1570713199:30342..30479Blg00007.0-exon-Sc0000648-1570713199:30342..30479Branchiostoma lanceolatumexon
Blg00007.0-exon-Sc0000648-1570713199:30775..30864Blg00007.0-exon-Sc0000648-1570713199:30775..30864Branchiostoma lanceolatumexon
Blg00007.0-exon-Sc0000648-1570713199:31582..31698Blg00007.0-exon-Sc0000648-1570713199:31582..31698Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000648genomeSc0000648:30342..31698 +
Spatial Expression
in the tripal_feature_cv_term.tpl.php
Properties
Property NameValue
GeneIDBlg00007