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Sequence
The following sequences are available for this feature:
mRNA from alignment at xfSc0000336:218..6101+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00004.0 ID=Blg00004.0|Name=Blg00004.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5884bp|location=Sequence derived from alignment at xfSc0000336:218..6101+ (Branchiostoma lanceolatum)
GCAACAGTCAGGGACCGTCCGGACCAACTGCCTGGACTGTCTGGACAGAA
CCAACTCTGTACAAGCCTTCCTAGGCCTGGAGGTAAGGAAGTACCCAGCC
ACTCACCACTGTTACCTTATTTGTCATGTTGTTCCCTGTGGTCTCTCACC
AGTGTACATTTTGATGAAGTCTCCACCAGAGTGCATTTTTCTATGATTAT
GGTCTCTCATCAAAGTGTGTACAATTTTTTCCATGTGGTCTTTTTTTCTC
ACACACTTATGGTTCCTCACCTTTGTGTTTTCCCCTGTTGTTTCTTGTCA
GTGTGTTTACCTACATGTGGAATCTTAGGTTAATTTTTAGAATCAGAAAT
AGCCTTGATAATTGAACATGTTCCTGCCAGAAATCTAAGATACAGTGATA
CAGAGTGAAAATACGCTCTTTCAAATAAAAGGTGTGTTTTTACAGACCTT
ACCTAAGCAGCTGGAGTGCCTGGGACTGAACAGTAAGCCCCAGTTAGTGT
CGCGGGTCATCGAGCTGTACAAGAACATGTGGCAGCAAAACGGCGACCAC
GTCAGTAAGATTTATGCTGGTACTGGAGCGTTAGGCCAGTCCAAGGTGAC
GGGTTTCTCCTTTCTGCTCTAGTGGTGAAAACAGCAACTGCAAGCTCCTA
CTTCCTCTTAAGGCCCCCATTCCACTAGACAGCAATCGCGCTGCACTCTC
GCTGCGTACTTAAACAGATTTGTTTAATACTTGATTGGAATATCATGCAA
AATGTAAGAGTATGTCTGTAAAGACAACAAAACACACAAAGTGTAAAACG
ATTCATTTTTTATCTAAGAAATTCGTTGAGCACTCTGTTAAAGTTAAGGT
CGCAGAGAGCGCGCAGAGAGAGTGCCGTTCTACTTCTAGTGGAATGGGGG
TATCAGCCATACCTATCTGGCCCCTGTTGGTCAATATTGACTATGGTAAA
ACTCTAATTCACATCAACCTTGTATACAGCGTAGTCTATGGCTAAACAGT
CCTATATTATTAGAATTTACTGTCTCTGCTAGGTAAATCACATCTTTGAA
CTGACTCTTAGCCATACATAATTGATACAATGGATAAGACGTGCCTGTGA
AATGGTTTGGCTGCAATAAAGAAGAACTGTTATCGTAGCACTTTGGTGCA
AAAAATGTTGGAAGTTTGTGAGGCATTTCAGTAGTACTTGTCAGAGGGCT
GTATTGTTACTTGCTCTTTGTACTCAATTAAAGTACATGTGTAGAAATGG
TGTTTTTTATTCTGTTGAAGATCTAACATCTGTGTTTGGTCCATCAAGAT
TTAGCATCATTGCCTTTTCCGAAAGAATGTTTTGTTCAAACTGAACTTAA
TACAAAGATGGCTCCGTTGTTGTTCCACCCACCAGGTTGGTAAGCTGGCA
GACGGCGCTCGCTCAGTATCGCGTACCATTCAGAACAATTTCTTTGACGG
CACCAAACAGGAAGCGATCGACATCCTCCTGCTGGGGAACACGTTAAACA
GCGAACTGGCCGACCGCGCTCGAGTTCTCCTGGCAACCAACAACCTCCAC
TGTGAGTCCTGCAGATGTTGAATTTCACTCTTTTGTCTTGAAGGATTTGT
GCGCCCCTTTTCCCAGTTTGCATCTGCTTCTTTTATATTCTTATATTGCA
CCCTGCATTGGTCACCTGGTTTTTGGAAATTTAGAAAATTCAGTTAATAT
TCCTAAACCTTATGACAAAAATGAAGTAAAGACAGGATATGTCTATGAAC
TTCTTAGTTTTGGTTAGATGCCTGTTGGATTTCAGATTCTGTTAAGTCAC
TGACAAAAGACTGCGGATGCTGTTTGAACTGTCTGAACACATCCAGTATC
TTGAGTAACTTGTATTTTGTGTTGAATGATCTTGATTAGTTAAGACAGCA
TAATGTAGAGCACAGCATTCACTTTCAGTTGGCTGTCCAATTAAGATAAC
ACTTCATCTGTTTTTCAAAATCACTCCCAGACCAGCACCTTTCCAAATTT
GAAGTGAACGAAATTCATCAATTATGAGGCTATCCGGTGCTTTTAATGTC
CGTGCAATTTTGTTTTCTTTCTTTATGATTTCTGTCTTATTTTGTATTTT
TTGCTTCCTGACTGGATTTTCTGCTAACCTTACAGAGGTGTCATTCCCAT
GATGCCTCTGTGTTTTCCCAACCATTACTTTGTTTTGCCCATATAAGGGA
GAAGAGCTCAAGGTCAAACTTTTTCCCGCTTGGAGGTGTTGGTTCAAGGT
AGCCTCTTGCACTGCATGCTGGGATTTCTGTTACGAGGTCAAACAAAATT
GATTTTACGGATGACATCCTCTAAATTCCTCAAATCTGATGCAAGAGTGA
AAGGAGTTAGTTTTCATTCTTTTGTGACGATTTCATGATTTTCATTCACA
CTTTTATACCTACAACTTCCATCTTCGTGAATGTCAGTCTTAGAATCAAG
CTTGTGTGGCCTCACTGATGCATGCTGGGCCTGGATTTTACCCATGATGC
AGTTCTCAGTCTTCTTAGTTGCTCTTTATTTGGGGCAACGTTACAGTTTA
CTGATTTATCCAATTTTTCTTTCACCAAGGCATGGTTTGCAGTTAGGATC
TTAGGAAGTTGACTTAATTGTTTTTGAAATTATGCACGGTTTTGCAGGTT
CACACATTTGACGGAAACCTTTTTTTTCTTCCAGCCTCCCCTAGCGTCCT
GATGTCAATGGTGGAGCGTCACGAGGACTACACGGTACCGGAGTCCGTGC
GCGTCTGCGTGGGCACCTGGAACGTGAACGGCGGTAAACACTTCCGTAGC
ATCGCGTACAAACACCAGTCCATGACAGACTGGCTCCTGGACAACCCCAA
ACTCAAGCCAGAGTGCAGCTTTGCAGGTATGTCATAGACTTGGATGAGGT
AACCGGGTACCCCATTGAATAAGAGTTTTAAATGAAGTATAGTAATGAGT
TATTTCTCTTGCTCACAAAATGAAAAAGGTCAACAGCAAGAACAACAGCA
TACTGTAAATGCAGAAATGTTCGCAGTGGTTTTATGTTCACGGTTTTCGC
GGCGACCGTTTCACCACAAACTTAAAACCAGTGCAAAAATTTTTGTCCAA
TACTATATATAATAGCAGTATGTGACTATAGCGCTGCCGCAAACTTAAAA
ACACCACTCCATTTTATATAATACTGGTTTATTGCATAATACAAGTCAAG
AAATGGCAGCCGCGGCTTTCCCCTTAGCGTAAGATAAAAACCATGCGAAC
TTAAATGCATTTACAGTATGCAGTGACAACCAATCTGTGTTTTATATTCC
TTTGAACATTGTATATCGGAAAAAAGCTTAACTCTGTCATGGTAGTGAGC
ATATTTCTCCCTTGTTTCCATGTACCCATAGTGACTAACCGTGAGATTAT
TCTGTACGTGCTTGAGAAAGCCCTTCAGACAACCTTCAGACACCATCCCA
AACGCTTGTTTATTTATTTGTTTTTATACAGACAGTAGCGGGCGGCTGGA
CTGGAGCGTGGCAGACGAACATCCCGTGGACATCTACGCCATCGGCTTCG
AGGAGATGGTAGAGCTGAATGCTGGGAACATCGTCATGACTGCCAGGTAC
AAACAATCGGTTGTTTCCAGGCACATAACAATGATAATACACAAGGCAAA
AGCTACTTAGAGCAACTAGATAGATTTTGTAAGCGGCCTTTTGATAGCAT
AAACTGTTTTTCGTCAGTGACTTAGCAAGATCTGAACAAAGATAACAGTG
TCCATCATATTGTTGGTGGGTTAGAAGAGATCCATGCAGATCTTTATATA
AGAAATGCAGTACACAATGTACTTCAAATAGTTGATTTCCCTTCTCTTAA
CATGCATGTTTCTTGCTTTTGCATTTTCAGTGAGTACTGGGCTATGAGTG
ATTTCTTTATTAGAGCAGTTAACGTTGTTGTTGTTTTTACCAAATGACTA
GTCACCATTTTTGTTTATCATGAAAGACCCTGAATGTAGACCGAGCACCT
TACCTCAGACCGTAGCTCCTCCTACAACTTATGTTGTGTTGGTTGACCCT
ATCAGACACTTCTCCCATAATCCCCCACCACTTTCCCCATTTCATTGCAG
TTTGTTTTCATATTTCCCTGCAGTACTGACAACCAGCGTGCATGGGCATT
GGAGCTGCAGAAAACGATTTCCCGCGACCACAAGTACATCCTGGTGGCGT
CAGACCAGCTGGTCGGTGTGTGTCTGTACGTCTTCATCCGGCCGCAGCTC
GCTCCCTTCGTCAGGTCAGAGGTCGTGGGTTCATACTATTAAATCAAAGG
TCACTGGGGTTATATAAAGTCAGAGGTCATGCATGTTACAAAATTGCTGA
ATAAGTTTGTTTCTGCAAATATATAGCAGTATACATGGCTAAGAATGGCA
CTGGTGGTGCAGTATCAATAGAGTTACCCAGAGATGATTGTTTGTTACCT
CCATGAAAAATGAAGGTATTGTTTTTGGCGTGTCTGTCTGTGGCATGGCG
CTCCTGTAACCCTCTTTAGAAAAAGCCCTGATAATTAAAGAACCTCTGGA
TGGACGATGTTATTTTGTATGTGGGTAGGCCTTGGAAAGACAAAGGTCAA
GGTTGATTTTAGGCCCCCTGGTGTATGACCTTGTTTAACTTGTTTTGGAA
AGGGACGTTGTTTGGAACATCTATATAATGTGTGTTTGTTGGCTGATTTA
TTAATAAATGTTTGCTTGCTTATTTCCTCAGAGATGTGGCAGTAGACATA
GTGAAGACCGGCCTAGGTGGAGCAGCAGGGAACAAAGGTGCTGTGGCCAT
CCGCATGCTACTCTTTGGGACATCCATGTGTTTTGTGTGTTCCCACTTCG
CCGCTGGGCAGTCCCAAGTCAAGGAGCGCAATGCAGACTTCACGGAAATT
GCTAGGGGGCTCTCTTTTCCCATGGTAGGTGGAAGAAGGTTGTAGATTTA
AGTTAGTTGCAAACTTACTGTGCTTGCTTATCATTTTTCCAGGGTATTTG
TTTATTTAACCCTTGACTGGCCTGGTATTTCAGTTGCAATTTGTTATCAG
GCATATCAAGGAGTTATTGTCTTGTGGTTACACTAGAATTCATCAAGGTT
TCTGTTGCATGTTTGGTCATTGTTGCTTCAGAATTTTGTCTTTTGCATAC
AATTTCTTCTCCAACGCAACTTTTTGGAAACTATAGAAGGGATAACGATA
TTATTATCATCCTTATTTATGTGAACACAAACTGACATGATTGTGTCGTT
AGGGTCGGACTCTCGGATCACATGACTACATTTTCTGGTGCGGGGACTTT
AACTACCGTATCGACCTGACCAACGAGGAGTGCAAGGCTCTGATCGCGGA
GGAAAACTGGGGGAAACTACAGACGTTTGACCAACTCAACATCACGAAAC
AGCAAGGGGATGTGAGTACAAATCCGAAACTCTGAACCTTCTCCCTGCTG
CCTAACTCTGTTACCACTGGTTAATTTGGTGATCAACAGCTACTTAAGAG
TGTTAAAGGTTAAAATGAATCAGCAGTTACAAAACTTTCTTGCAAATCTA
TGATTTCTAAACTTTCAAACAAATCAACAATCCTGATGCTTCTGTTTCAA
ACAAAATCAACACTTCCAACAATTTTAAACAAATCTAGATGCAGTGAATT
GTTATTTGGTATTGGTATCGACTTGATTTGATTTGATTTTCAACTGCCAT
TCGCACAAAGTTATTTTGGTTCTTGTGTATGAAAAGGTCAGCAAGTCACA
TCTATCTGTTAAAAGTATAAATTATTATTATAGACGAAGTAGGACTGTTT
CCAGCTTTAAATTTTTTCTGTCCAACCACTTTTTTAGGAGCCCATGTTGT
TAATTTTTGTTGTTGAATATGTCATCAGACTTGA Coding sequence (CDS) from alignment at xfSc0000336:218..6101+ >Blg00004.0 ID=Blg00004.0|Name=Blg00004.0|organism=Branchiostoma lanceolatum|type=CDS|length=1204bp|location=Sequence derived from alignment at xfSc0000336:218..6101+ (Branchiostoma lanceolatum)
GCAACAGTCAGGGACCGTCCGGACCAACTGCCTGGACTGTCTGGACAGAA
CCAACTCTGTACAAGCCTTCCTAGGCCTGGAGACCTTACCTAAGCAGCTG
GAGTGCCTGGGACTGAACAGTAAGCCCCAGTTAGTGTCGCGGGTCATCGA
GCTGTACAAGAACATGTGGCAGCAAAACGGCGACCACGTCAGTAAGATTT
ATGCTGGTACTGGAGCGTTAGGCCAGTCCAAGGTTGGTAAGCTGGCAGAC
GGCGCTCGCTCAGTATCGCGTACCATTCAGAACAATTTCTTTGACGGCAC
CAAACAGGAAGCGATCGACATCCTCCTGCTGGGGAACACGTTAAACAGCG
AACTGGCCGACCGCGCTCGAGTTCTCCTGGCAACCAACAACCTCCACTCC
TCCCCTAGCGTCCTGATGTCAATGGTGGAGCGTCACGAGGACTACACGGT
ACCGGAGTCCGTGCGCGTCTGCGTGGGCACCTGGAACGTGAACGGCGGTA
AACACTTCCGTAGCATCGCGTACAAACACCAGTCCATGACAGACTGGCTC
CTGGACAACCCCAAACTCAAGCCAGAGTGCAGCTTTGCAGACAGTAGCGG
GCGGCTGGACTGGAGCGTGGCAGACGAACATCCCGTGGACATCTACGCCA
TCGGCTTCGAGGAGATGGTAGAGCTGAATGCTGGGAACATCGTCATGACT
GCCAGTACTGACAACCAGCGTGCATGGGCATTGGAGCTGCAGAAAACGAT
TTCCCGCGACCACAAGTACATCCTGGTGGCGTCAGACCAGCTGGTCGGTG
TGTGTCTGTACGTCTTCATCCGGCCGCAGCTCGCTCCCTTCGTCAGAGAT
GTGGCAGTAGACATAGTGAAGACCGGCCTAGGTGGAGCAGCAGGGAACAA
AGGTGCTGTGGCCATCCGCATGCTACTCTTTGGGACATCCATGTGTTTTG
TGTGTTCCCACTTCGCCGCTGGGCAGTCCCAAGTCAAGGAGCGCAATGCA
GACTTCACGGAAATTGCTAGGGGGCTCTCTTTTCCCATGGGTCGGACTCT
CGGATCACATGACTACATTTTCTGGTGCGGGGACTTTAACTACCGTATCG
ACCTGACCAACGAGGAGTGCAAGGCTCTGATCGCGGAGGAAAACTGGGGG
AAACTACAGACGTTTGACCAACTCAACATCACGAAACAGCAAGGGGATAC
TTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00004.0-exon-xfSc0000336-1570713199:218..299 | Blg00004.0-exon-xfSc0000336-1570713199:218..299 | Branchiostoma lanceolatum | exon |
| Blg00004.0-exon-xfSc0000336-1570713199:663..812 | Blg00004.0-exon-xfSc0000336-1570713199:663..812 | Branchiostoma lanceolatum | exon |
| Blg00004.0-exon-xfSc0000336-1570713199:1603..1768 | Blg00004.0-exon-xfSc0000336-1570713199:1603..1768 | Branchiostoma lanceolatum | exon |
| Blg00004.0-exon-xfSc0000336-1570713199:2902..3093 | Blg00004.0-exon-xfSc0000336-1570713199:2902..3093 | Branchiostoma lanceolatum | exon |
| Blg00004.0-exon-xfSc0000336-1570713199:3699..3813 | Blg00004.0-exon-xfSc0000336-1570713199:3699..3813 | Branchiostoma lanceolatum | exon |
| Blg00004.0-exon-xfSc0000336-1570713199:4341..4481 | Blg00004.0-exon-xfSc0000336-1570713199:4341..4481 | Branchiostoma lanceolatum | exon |
| Blg00004.0-exon-xfSc0000336-1570713199:4949..5141 | Blg00004.0-exon-xfSc0000336-1570713199:4949..5141 | Branchiostoma lanceolatum | exon |
| Blg00004.0-exon-xfSc0000336-1570713199:5470..5628 | Blg00004.0-exon-xfSc0000336-1570713199:5470..5628 | Branchiostoma lanceolatum | exon |
| Blg00004.0-exon-xfSc0000336-1570713199:6096..6101 | Blg00004.0-exon-xfSc0000336-1570713199:6096..6101 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000336 | genome | xfSc0000336:218..6101 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00004 |
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