Blg00003.0 (mRNA) - B. lanceolatum

Overview
Name
Unique NameBlg00003.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0001340:636..1207-

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00003.0 ID=Blg00003.0|Name=Blg00003.0|organism=Branchiostoma lanceolatum|type=mRNA|length=572bp|location=Sequence derived from alignment at Sc0001340:636..1207- (Branchiostoma lanceolatum)
ATGGAACTGTTGACGCGTAGTATGGCGTCTCCGCGGTCAAGCTCCGCCCT TGACATACGGGTCCTGAGCGGGTCAGCACATGTTCCCCCCCGTCGGCATC TCCGCTCAGACCACTTCCACCCGACAGTCTCGGCGACCACAGGGCGCGTG CCGGCCACAGCGGTCCGTTCCCCCCAAAAATTTCAAGTTTTTCCAGCTCG TGTTCGTCTTCGTTTTAAGGTCTCCGCTTCCGGCATCGCGCTAGGATCAC GGCAGGTTCCAAGTACTGTCGTGCTTGTTCTCTACCCGTGAAGGGACACA AGGGACCTCATGGCGTTGGCAAGTGTCGGGTCGGACGTGCACGCTCCGAG GTCCACTACGATTCTCTGCGCCGGGACGAGAAAGTTCGTCGTTCCCTGGA GGATTTACATTTCAAGAGCCGCTCGAAGGATTTCGCAAATGGCTTGTGGT CAGGTCTGAGCGAAGACGAGGCAGAGGATAGGAAGACTGTAAGCGACCTT CGGACAGATGACGGTTTGATGCGGACAGTCGCCGATCTGTTGGGTCCACT CAATGAACGGGTTGACGCGTAG

Coding sequence (CDS) from alignment at Sc0001340:636..1207-

>Blg00003.0 ID=Blg00003.0|Name=|organism=Branchiostoma lanceolatum|type=CDS|length=441bp|location=Sequence derived from alignment at Sc0001340:636..1207- (Branchiostoma lanceolatum)
ATGGAACTGTTGACGCGTAGTATGGCGTCTCCGCGGTCAAGCTCCGCCCT
TGACATACGGGTCCTGAGCGGGTCAGCACATGTTCCCCCCCGTCGGCATC
TCCGCTCAGACCACTTCCACCCGACAGTCTCGGCGACCACAGGGCGCGTG
CCGGCCACAGCGGGACACAAGGGACCTCATGGCGTTGGCAAGTGTCGGGT
CGGACGTGCACGCTCCGAGGTCCACTACGATTCTCTGCGCCGGGACGAGA
AAGTTCGTCGTTCCCTGGAGGATTTACATTTCAAGAGCCGCTCGAAGGAT
TTCGCAAATGGCTTGTGGTCAGGTCTGAGCGAAGACGAGGCAGAGGATAG
GAAGACTGTAAGCGACCTTCGGACAGATGACGGTTTGATGCGGACAGTCG
CCGATCTGTTGGGTCCACTCAATGAACGGGTTGACGCGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00003.0-exon-Sc0001340-1570713199:1046..1207Blg00003.0-exon-Sc0001340-1570713199:1046..1207Branchiostoma lanceolatumexon
Blg00003.0-exon-Sc0001340-1570713199:636..914Blg00003.0-exon-Sc0001340-1570713199:636..914Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00003.0Blg00003.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0001340genomeSc0001340:636..1207 -
Spatial Expression
in the tripal_feature_cv_term.tpl.php
Properties
Property NameValue
GeneIDBlg00003