Blg00001.0 (mRNA) - B. lanceolatum

Overview
Name
Unique NameBlg00001.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at xfSc0011207:1..928-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00001.0 ID=Blg00001.0|Name=Blg00001.0|organism=Branchiostoma lanceolatum|type=mRNA|length=928bp|location=Sequence derived from alignment at xfSc0011207:1..928- (Branchiostoma lanceolatum)
CAGCTTTTCAAGGGGAAGTTCTTCCACTGTGAAGGACCTGATCTGTATGG AGTGAAAAACAAGACAGATTGCTTGAAGGACACCAAGAGGAAATGGGTCA ACCAGAAGTACAACTTTGACAACCTCGGACAGGTTAGTACATTTATGTGT CATATCTTAGTTCTGAGGCAGGTTTGACTGTGTTTACTATTTGGTAAAGA AACTAATCAAGATGTAATAAAGACTTTTGCAACTTCAACAAATACCATGA AATACCGTGCATTACCACATCTAGATGCAAGTGTATGCTCATAATAATAG CCATGACTATTGAAATTGGCCTGGTCAAACCTTTAAGACTTACCAGAATC TTGCAGATTATAACTTTGCAACCTGTACAATGTACTTAAATGTAAGTTGA TGTTGATAGTGTGTATGTTGTTGTCTTCTCCATACCAGGCATTGATGGCC CTGTTTGTGCTGGCATCCAAAGACGGCTGGGTGGACATCATGTACAACGG CCTGGATGCTGTGGATATAGATGTACAGGTCAGGACTGTTCCATTTGTAG CAAACATTCATGTTAATAATAGCGCTTCAGCACATGACATGTTTTTGATT GGCAAACAGACTGCATGTTAAGCTAAATGTATATCCTTGTTTACTAAAAT TGATTGTGATAATTGAATAATTCCACATCACCTCAGTTTGAAATAAAATG CAAATTTATAGCCTATATTTAGACTGGATAGCCTTAGTTTTAGGTTTACC CATTTTAACAATTTACTACCGATGTATAAGCCTATTTGAAAAGATGAGAG CTGCTATTATTTATTGAATGAAAAGACATACATAAAGCCATTTGACGTGC AAACAATCTAACCTTTAATCATTATCCATGTATTATTGCAGCCCATAGAG AACTACAACGAGTGGATGATCATCTTCT

Coding sequence (CDS) from alignment at xfSc0011207:1..928-

>Blg00001.0 ID=Blg00001.0|Name=|organism=Branchiostoma lanceolatum|type=CDS|length=259bp|location=Sequence derived from alignment at xfSc0011207:1..928- (Branchiostoma lanceolatum)
CAGCTTTTCAAGGGGAAGTTCTTCCACTGTGAAGGACCTGATCTGTATGG
AGTGAAAAACAAGACAGATTGCTTGAAGGACACCAAGAGGAAATGGGTCA
ACCAGAAGTACAACTTTGACAACCTCGGACAGGCATTGATGGCCCTGTTT
GTGCTGGCATCCAAAGACGGCTGGGTGGACATCATGTACAACGGCCTGGA
TGCTGTGGATATAGATGTACAGCCCATAGAGAACTACAACGAGTGGATGA
TCATCTTCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00001.0Blg00001.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00001.0-exon-xfSc0011207-1570713199:797..928Blg00001.0-exon-xfSc0011207-1570713199:797..928Branchiostoma lanceolatumexon
Blg00001.0-exon-xfSc0011207-1570713199:401..490Blg00001.0-exon-xfSc0011207-1570713199:401..490Branchiostoma lanceolatumexon
Blg00001.0-exon-xfSc0011207-1570713199:1..37Blg00001.0-exon-xfSc0011207-1570713199:1..37Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0011207genomexfSc0011207:1..928 -
Spatial Expression
in the tripal_feature_cv_term.tpl.php
Properties
Property NameValue
GeneIDBlg00001