|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000236:346502..353595+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00114528 ID=BlTCONS00114528|Name=BlTCONS00114528|organism=Branchiostoma lanceolatum|type=mRNA|length=7094bp|location=Sequence derived from alignment at Sc0000236:346502..353595+ (Branchiostoma lanceolatum)
GCCAAACAGATTCTACTGAAGGCGGCAAAGGTCAACAAAGTCACCATACC
TGATGACGTGTTGAACGAGAAGGCACACAAGAAGGTGTTCGTATGCACAG
GCTTTGTTGACTGATGTGGCTAGAGAAAACATGGTTAATGTTGAAGCAAA
CACGAAGAAAGACTTAACGTATTGTTGGTATCCTTGAGGGGAATACATTT
CAAAACACCCTTCAAAAAGAATTTTTTTCAATTACAACAGGGTAGTCAGA
GATCCATACTGATCTTAGACCCTCCCAGTCCCAAAGACAAAACTATCTGA
ACAAGATTGGCAACATGAAAAGACGTTACCATGGCGACGGTGGTCTCTGT
TAATATTTCAATTTTGTAGCCCACATGCAAATAAGGACCTCACTTGCATA
GATTGTATCAGTTGATCACCTTCTCTACCCAAATAGCAGTCTTGTCAGTA
TAGAAGTTTTGTCTTCACAAAAAAGGATATTGTACCATTTCCTCATAAAT
GATGTAAATGAGGCCCTCATATGCAAAATTTATGTCTAATAGTGGCCACA
TTTACTTAACTTCCAAATGTTGCAAGAATGAAATCCCCATCATTTACCAC
TATGTATTTATAGTATTTGGTCAATAATTGTGCAAATTAGGTATCAATTT
TCATAATTGATATCTAACAATATCTATTTCTTTCTCCGTTACATATACCA
TGTGTTTGAGAGTTCTATAATGGAATGTAGCTGATTTATAAACTTTTCTC
ATTAATTATGCAAATTAGATATTGATTTGCAGGATTGGCATATGATTATG
TAAATCATCATTTAAGCTATCTACATACCAAAAATCAGGACGATCCGTCA
TCCCCTTCTAGCGTTATTCTCTTTCAAAGTTTGAGACAAAATCAGTTCCT
GCAGTTCAAAAAAGCCGCTAGGGGGGTCCAAGTCTACAGGACCTATTTTC
CCAACAAAGCGCTATCCACCACTGAAAAATCATGACCATAGCATGTTCAG
AACACGAGATTTGAAAAGCGAAAGTTCCCCTTCAGTACCATAGAAAGTTG
CTAGGGGGCCCAAAATCGAATCATTTTAAGGTCGCACAAAGACATACTAA
CCTACCAGATATGAAGACAATCCATCCAGGCATTCTTGAGTTATTGTCTC
GTGGACTTTCACATTCCTTTGCAATTCCTAGAATTCTTGCAAACTGCACA
CAATATATATACTTTTAGGCTCGCCCCTAAGGCGTCGCCAAAATGTATTG
AAATGACGCACAAACATGTACACACGGGTTTGAAACGTGCAAATCGTTCA
ACCAAATACTCAAAAACAAATATGCATTATGTACATTGTCGTCTAGTAGA
TCCTCACAAATGATCAAAGCAAAGACAAGCATCCTCGCAAAACTTGTTGG
TATTGACTGAAAATGTTGCAAAATGGCAAGAGATAATACCGCATTATATA
GAGGTAAAGAAATGTAACTTTGTTTCCCAAAAGGACGACAATCTATACAC
CGCCATCGACCTGATTCGCACCCCCCACCTGCGACTCATGAACATCGTCT
GTTGCTACAACTGGTAAGTGTTGCCACGTACTCAACATGTTAGAAGAGCT
TGAAAGAGTTCATATCATACGGTGCTATGTGAGGGTATATAATGATATTT
GAACTTCCTTGAATAAACAGGAGTTTAGAATATTTGATAAACAGTTTTTA
AGATCATGTGTAGCCGAAGCACCCTACATATATGAGAATGCAGTCTTTGC
TTTGAAAGTTGGAGTCTAGCTCATTTCAAACTAGAGTTCCACGACCTCAT
ACCTTCGCCAAATGATTTTAACCTTTATGACTGACGTATTATGAGTGTTT
CTCATCAATAATAAATCATACCAGTTGATTGTCGTAAAATATAACATGTC
CAAAGTATCAGCTTAACAAATTATGAGCCTACGGTTATGCTAATATTTAT
CATCAATTATGCAAAAGAGGCCCTTATTAACATAATTTGATTCAACGATG
TTAACATTCACATAACTTCCCGATGCCACAAAAAAGTATTAAATGTATGA
AATTGCCGTCATTTGCCAGTGTGGAATAATACAAGTTACTCATTAAGTAT
GCAAATGAGGCCCACATTTGCATATTTTCTATCTACCAACAGTCCTCTCT
TCCTCAGTTACAATTTGAATAGTCATATCATGGAACAAAGCGGATTTTTA
CAGTTGCCTTATTAATTATGCAAATTAGAATCTGATTTGCATAATTATTG
TCCAATCATACTAAGCATCACACAAGCTATCCACATACCAAAAATGATGA
CCATCCATCAAGGCCATCTTGTTATAGTATTTTCTCATTAATTATGCAAA
TGAGGTCTTCATTTGCATAGTTCATATCAATTAATATTTCTCTCTTCCTC
AGTTACATATGTCACATGTTTCAGAGTCCTATCATGGAATTTGGCGGATG
TATAAACTTTCCTCATTAATTATGCAAATTAGATACTGATTTGCATAAGA
AGTATCTAATCATGTACATCATCACTCAAGCTATCTACCTACCAAAAATC
ATTACCATCCATCAAGCCCTTCTTGAGTTATTCCCTTTCAAAGTCAGACG
CAAAACCTGCTCCTGCAGTTCCAAAAAAGCCGCTAGGGGGCCCAAACCCA
CACCACTTACTCTTTGTCCTAAGATCTATCTACCACTCAAAAATAAGTTC
CATAGCATGTCCGGAACACGAGTTATCAAAACAGGAAGTTCCGCTGCAGT
ACCGTAAGAAGCCGCTAGGGGGCCCAAANAATCGTTTTTAGATCTCATTA
AAACCTACCAACATACCAAATATCAAAACAATCCATCAAGGCATTCTCGA
GTTATGCTGTGCCACTACAGACAAACAAACAGACAGACAAACAAACGCTA
CCCTCTGCATAACCTTCTCGGCGAAGGTAACAATGGTGAAATTCTCTAGG
ATGGTTGTTTCCATGGTGTACTACGGTCTATCCCTGAACACGGGTTCCCT
TGCTGGGAACATCTACCTGAACTTCTTCATCAGCGGAGCTGTGGAGATCC
CCGCCTACTATCTGTCATGGTGGCTCCTGGACATCATAGGAAGGTGCGCA
TGTGTACATGTATTTTGATTATATCTTTTGCTTATTAGCGTTGCATGGAA
AGTGGCCGATGCTACTACATTCTGTTCATTCGCCTTTGTAACATAAAACT
ACTCTGACGCTTATAACCATATTCTACATCCGGTATGAACTTTATAAAAG
CAACATAAGTAACTCTATGATTTGGTAATTTCTTTCCAGAATCAAATGCC
ACACGGGTTTCATGATTCTGTCTGGAGTAGCTTGCATTGTGGCACCGTAT
CTAGCGCCCCCTTACGTCGCTGACCGTGAGTACATTTTCACACCATGCAC
AATTGTTCGTTTCCCGAACTTTTTGGAAATTTCTTCTGCAGGATTGCTAT
GATTCAAGTTGCCCGCACAATATCATAGATATTTTGGCTAATTTGTTTCC
GTCCAGACCTCGCTCCCTTGTCTGTCACGCTGGCGATGATAGGGAAGGCA
GCGATCAGCGCGGGGTTTAACATCGTCTTTCTGTTGTCTGCAGAACTAAA
CCCAACAGCTATCAGGTGAACAGCGCTGCCTAGCGTTTTTTTGCATATTT
TCACTCAGATACCTGTCCGCCTTTTCTTCTCGACATCGTGAATGGCTAGC
TTTCCTAATTATACAAATACTTGGAGGTCACTGTTTACCTACATGTACTT
CTCTGTGTATATTTGAGTAGATTAATGTCGACAGTCAATAGTTAGATACC
ATATTTCAAGACAATTCAGTATCAATATTGTTTCCCTCAGAAATGTCGGA
GTGGGGGCCGGCTCCATGTTTGCTCGACTCGGAGGTGTCATCTCGCCGTT
CGTTGTCCTTACCAACAAACTCTGGCAACCCCTGCCTTTCCTAATCTTCG
GCGGACTCTCCATTCTTGGAGGCTTGTGCGTGATGATCCTGCCTGAAACG
CTAGGGGCCGCTCTTCCCGAGACACTTGAAGAGGGGGAGAACTTTGGAAA
GTAAGGATTAGTTTTTAAAGGTCTTGTAGCGGGGGGTACTTAGAACAAAC
TCGCCAGAAATGATTATGATGGTGAAGAATGACTGGATCGAAAATTCCGG
CGAGTCTAATTTCTTGAGTTGGAGATCGCTTTAACCTTATTCGTAACGTA
ATTTACTAACTGTCATGCTGATCCTGAACATGCTTTACTTGNCAACAACC
TCTGGCAGCCCCTGCCTTTCCTAATCTTCGGCGGACTCTCCATTCTTGGG
GGCTTGTGCGTGATGATCCTGCCTGAAACGCTAGGGGCCGCTCTTCCCGA
GACACTTGAAGAGGGGGAGAACTTTGGAAAGTAAGGATTAGTTTTTAAAG
GTCTTGTAGCGGGGGGTACTTAGTACAAACTCGCCAGAAATGATTATGAT
GGTGAAGAATGACTCGATCGAAAATGCCGGCGAGTCTAATTTCTTGAGTT
GGAGATCGCTTTAACCTTATTCGTAACGTAATTTACTAACTGTCATGCTG
ATCCTGAACATGCTTTACTTGAATATGATTGTGTCTGAGGCAGTGAGCTA
ACTCCGGCTTTTCTAACACAGGCATGATGGGTACACGGTACTTGTATCAG
AAGATAGCTTTGAAATGGATCAGTTGGTACGTTCGGCCATGTCATCCTTC
AAAAGATACCTTATCTAATGAACCGTTTTAAAATACATTTCGACACTTAA
AAGCTAGTTATCTTTGTGTCCGTCCCACTGCAAGACAACCAGCGGGTATA
GAGCTCTTATTTTACTTATTCAAATGTGACAGTGGTTTGGTAAAGCCCAG
ATTACACATAACCGAACATGGCTCCCGAACGCTAGCCGACCCAGTTCGGC
TGTAGTTCTGGAGCAGTCTGACCATTTTTTAGGCCATGCCTATCTTTGGC
GCCGAACATGTCCCGACCATCTTCTAATCACTAAATGACTTACTCCCGAC
TTAGCCCCGAATGCTTTCTAACCTACTCCCAACCATCCCGACCTCTAGCC
GGAGACTACCGAATCTCTCCTGACTAATACCCGACCGATTGCTGACACTC
TCACGACTTTATTGTGTTATTGTTAATGTTTATCAAAATTATTCATTGTT
CTATGTTAACATCACAGAGAGATCGAATTCGGATCACGGTTAGCTTCATT
ACGGCTTTTTGTGTTCTTCTTTGTTTTTAGTCGTGTCAAGGTCGGGGTGA
TTCGCCCACGTTCTGGTAACGTTAGCAGTCACTTGGTTCAAAATGAGTTA
GCAGTGATTTGTCTACGGCCTTGGAATGAGTCATGGGTACGTTAGAAGCT
ACTTTTGAGTAAGTCATCAATGGTTCTGGCAAGGTTAAGGTTCTAATTTT
ACTGCTGACTTACTCCCGAACACCAGCCGAACACTAGCCGACCGCGCCGA
ACACTAGCCGACCCATTCCAGACCTCCCGTTCAGAGCCGAATGTTTTAAC
ATTTTCAAAACATTCGGCTGGCGCAGCCGAAGACCAGCCGACTCAGCCGA
CCTAGCTCCCGAATCACTCCTAACCATGGTCGGGGGAGAGTCGGCAGGCC
ATGTTCGGCTATGTGTAACCGGGGCTTAATTGATCTTTGAATAGAAGATA
CAGATGCCTCCATATTTGAAGACAAATACTCTTTTTGTTTTTCAGGAAGA
AGAAGAAGAAAGTGTATCTGTCAGACATCGAGAAGAACGGGGAAGCGAAC
CAGGGCTTCGCGACTGGAAAGATGGCTAAGGTCAAGATTAACTCTGACGA
GATGACTAATGGCGAAACCACGCGTTTGTAATTAACACACGTACTGTATG
TATGTGGCTGTAAAATCTTCCTGTATGGTATTAGACTAGAACCACACTAC
TTCAGGTGATCACATTGAAGAGCTCGCATGAAAGCTCATCTGTGTTGGTA
GAGTACATATTGGGATAATTTGAAGCTTTAATCCAACGCAATCCAACATT
GAAGAGCTGTTCACCTGGGCCAGTTTGTGCATCAGCTAGTCGTCAATGTA
AACAGCTTTCGGTAGCTCATGTGGTTGCTGCCGGTAGCTTACGAGTTTAC
TGTCAGTAGCTCACGTCATCACCTGCCAGTAGCTCACATGATCACCTGTC
ATTAGATAATATGATCACCTGTCAGTAGCGCACATGATCACCTGTCATTA
GCTAATATGATCACCTGTCAGTAGCGCACATGATCACCTGTCAGTAGCTC
ACATAATCACCTGTCAGTAGCTCACGTGGTTACCGCCAGTAGCTCACGTG
AACACCTATAAGTAGTAGCGCACATGATCACCTGTCAGTAGCTCTCATAA
TCACCTGTCACTATAGCTCACGTGATCATCTGTCAGTAGCGCACATGATC
ACCTGTCAGTAGCTACATAATCACCTGTCAGTAGCTCAAATGATCACCTG
TCAGTAGCTCACATAATCACCTGTCAGTAGCTCACATGATCACCTGTTAG
TAGCTCACATGATCACCTGTCAATAGCTCACATGATCACCTGTCAGTAGC
TCAAATGATCACCTGTCAGTAGCTCACATGATCACCTGTCAGTAGCTCAC
ATGATCACCTGTCAGTAGCTCACATGATCACCTGTCAGTAGCTCACATGA
TCACCTGTCAGTAGCTCACATGATCACCTGTCAGTAGCTCACATGATCAC
CTGTCAGTAGCTCACATGATCACCTGTCAGTAGCTCACATGATCACCTGT
CAGTAGCTCACATGATCACCTGTCAATAGCTCAAATGATCACCTGTCAGT
AGCTCACATAATCACCTGTCAGTAGCTCACATGATCACCTGTCAGTAGCT
CACATGATCACCTGTCAATAGCTCACATGATCACCTGTCAGTAGCTCAAA
TGATCACCTGTCAGTAGCTCACATAATCACCTGTCAGTAGCTCACATGAT
CACCTGTCAGTAGCTCACATGATCACCTGTCAATAGCTCACATGATCACC
TGTCAGTAGCTCAAATGATCACCTGTCAGTAGCTCACATGATCACCTGTC
AGTAGCTCACATGATCACCTGTCAGTAGCTCACATGATCACCTG Coding sequence (CDS) from alignment at Sc0000236:346502..353595+ >BlTCONS00114528 ID=BlTCONS00114528|Name=BlTCONS00114528|organism=Branchiostoma lanceolatum|type=CDS|length=498bp|location=Sequence derived from alignment at Sc0000236:346502..353595+ (Branchiostoma lanceolatum)
GCCAAACAGATTCTACTGAAGGCGGCAAAGGTCAACAAAGTCACCATACC
TGATGACGTGTTGAACGAGAAGGCACACAAGAAGGACGACAATCTATACA
CCGCCATCGACCTGATTCGCACCCCCCACCTGCGACTCATGAACATCGTC
TGTTGCTACAACTGGATGGTTGTTTCCATGGTGTACTACGGTCTATCCCT
GAACACGGGTTCCCTTGCTGGGAACATCTACCTGAACTTCTTCATCAGCG
GAGCTGTGGAGATCCCCGCCTACTATCTGTCATGGTGGCTCCTGGACATC
ATAGGAAGAATCAAATGCCACACGGGTTTCATGATTCTGTCTGGAGTAGC
TTGCATTGTGGCACCGTATCTAGCGCCCCCTTACGTCGCTGACCAAATGT
CGGAGTGGGGGCCGGCTCCATGTTTGCTCGACTCGGAGGTGTCATCTCGC
CGTTCGTTGTCCTTACCAACAAACTCTGGCAACCCCTGCCTTTCCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00114528-exon-Sc0000236-1564993656:346502..346585 | BlTCONS00114528-exon-Sc0000236-1564993656:346502..346585 | Branchiostoma lanceolatum | exon |
| BlTCONS00114528-exon-Sc0000236-1564993656:347985..348064 | BlTCONS00114528-exon-Sc0000236-1564993656:347985..348064 | Branchiostoma lanceolatum | exon |
| BlTCONS00114528-exon-Sc0000236-1564993656:349451..349594 | BlTCONS00114528-exon-Sc0000236-1564993656:349451..349594 | Branchiostoma lanceolatum | exon |
| BlTCONS00114528-exon-Sc0000236-1564993656:349791..349876 | BlTCONS00114528-exon-Sc0000236-1564993656:349791..349876 | Branchiostoma lanceolatum | exon |
| BlTCONS00114528-exon-Sc0000236-1564993656:350342..350551 | BlTCONS00114528-exon-Sc0000236-1564993656:350342..350551 | Branchiostoma lanceolatum | exon |
| BlTCONS00114528-exon-Sc0000236-1564993656:352197..353595 | BlTCONS00114528-exon-Sc0000236-1564993656:352197..353595 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000236 | genome | Sc0000236:346502..353595 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF056175 |
|
