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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000236:266224..274756+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00114505 ID=BlTCONS00114505|Name=BlTCONS00114505|organism=Branchiostoma lanceolatum|type=mRNA|length=8533bp|location=Sequence derived from alignment at Sc0000236:266224..274756+ (Branchiostoma lanceolatum)
GCTGAATATGTTATATATAGTATTTCCCCCGCGCCCATTTCTGCAGGTCA
AAGAAGTTTATGTAGATCGGTATGGCGGCCACAACAGCTACATGTCGTTC
CCGGGGCTCCCAGCTGATCCTCGTCCTCAGAGTTCTCTGTGTACTGGCTG
TGGTCACCTGTTATCCCTGTCAATCATCAATACAGGTGAGCTGAATATTG
TGAAGTCGTTTTGTGCGACCTTTCCAAGTAACGCGAGGGTCGTGTTTTAT
ATAGTACAATGCATGTCTGTTTAACTGGAANTATAGCACAATGCATGTCT
GTTTAACTGGAATGAAGGCAGTGATTGACAAATGTGGCCGGTATTTGAAA
CAGTCCCAACAAAATCGTGGTTCAAATTTGTTGAAGATAACAGTTACCCC
TATGGGAAAGAAACACACTGTTTTCTCGACCACTTACCCGGAAACAAAGA
GTGTCATTGTTCATGTATGTGAGGGCATGACCTTCTAGCGAACTCTTATA
GCACTTAAAGCCCCAAGAAATACTAGTGTAGGCGGACGCCGGCCCAGGTG
GTACGAAATCTGGTGTAACCATAGTCTTTTATAATTACGNGTGAGTTTCC
CGGCCCCGCCCAGTAGTACCAGCCCGGCTTTTGCTTCAGCTTGTATGCCC
GCCCCGCCAGCAAGGGGAAAACTACTAAATGCATTTTATGNATTCTGAAA
GGCAGAATTGTTCTCCTCAAACCAAGGTTTAGTCCAGCATGGACCAATTA
CAATGTTTTGAATCCTTGGAAACACAGCAACAAATCTCTACTTCACGGTT
CACTGCCCAGGTCCTGTATGTATGCATATATGAGTCGAGCTGTATTCGTG
ACCATGCAAGTATAACAGCCTTGGGCCGCAGTCGGGCGTAATTACCTTCG
CCGAGAAGGTTATGCAGAGGGTAGCGTTTGTATGTGTGTGTGTGTGTGTG
TGTGTGTGTGTAATTGACCAGCATAACTCAAGAAGGCNTTTTTGTAAACA
AATCCATTGTGTACTTACCAGTTCAAACCTTGCATGTTGCACACATTCGC
AAACATCGTGGTGGCGCGGTATAGACCGTTGTTTGTTGGGCTTTGACTGC
TCCAAACACGCGTGGTACGGTCCCATCAGGTCAAACTGTCGCACGGTTGA
CGTTTCACTGACAACACTTCACTGTTTACATCCGCACGAAAAAAAACACA
GATATTATGTTCCAACACACATATATAATGTGCCTCAGCTCCGATCCGTT
CTAAAAAAAATCTGGTTCCGAATGACCTNAACCGGTATAGGTTTGGGCCC
CCCCCCTGCGGCTTTTTTGGAACTGCAGGAGCAGGTTTTGCTTCAGACTT
TGAAAGGGAATAACTCAAGAAGGGCTTGATGNCTCATTTCAAATAGCCTA
GAATGTGCTGCCACCATGATACTAGTAAAGTTGCAGCGCCACTGTACGGC
GAACAATAGTACAGCACATCGCATATTCTGACCATGAGTGCCTCCTGNAC
ACTTTTTATGCAAATCAGTATCTAATTTGCATAATCAATGAGGAAAGTTT
ATACATCCGCCAAATTCCATGATACCACTCTCAAACATGTAACATATGTA
ACTGAGGAAGAGAGAAATATTGATAGATATCAACTATGCCTTATACTTTG
GACAACTTCTGTTATTTGGGTGGAGAAGACGATCAACTGGTATGATTTAT
AATTGATGAGAAACACTCCTAATACGTCAGTCATAAAGGTTAAAATCATT
TGGCGAAGGTATGAGGTCGTGGAACTCTAGTTAAATTTGCAGTAAAGTCT
ATATTACATTGGACGACCTGTCACAAGTTCCACTCTTACATATTCAACTC
TAAACTGTACAGTAGTGAAAAGCGGCCTATCATTTAACAGTATAACGTTA
TAGACGATATCCTGCATGTTGATAACTCTACAATGATCTACAATATCTCT
CATGCGGGGGGGGGGGGCATACAGGGAACGACACAGTTTTAAATAGACAT
TGAGAAGTTTTTCTTATTTGGCTCATTTCGGGGCTGGAGAAGGAGCAGGC
ATTTATTCTTATGTATAAAAAAATCAAATTGCTTGATGATTTGGCTAACC
AGGTGGAATTTACAGATACTACAAATGTCGGCAGTGTAATCTGCACTTTT
CAAGCAAGCCGCGTGGATCGCTGTTGCACGGCCCTTCCAATGTTCAACGT
GTTTTACAGCATCACATCGACATCCTCTGGAACTACCTACGTCATCAAGT
GTTGTACCAAACAGTGTACTTTGAGACGTGGTTCGTAGTTTTGTGTTACT
CCATCATCGCTCTGGTGCCCGAGGCCATGGCACAAGTCTCGTGCTTCTCC
CGGTACCGTCTGGAGCGGAGTTCAGCAGCGCCCCGCCCCTCCGTTCCCCA
GCTCATGACGGAGGGAACCCTGTACATGCTACCTTTAGCTGCGCTCGACA
CAGTTATTGTCAAAAGGTAAAATCTATCTGTATAAGTTGTGGTTTAGTTC
TTTATTGTTCAGTTTGACTTCCTATGATATGCATGAATGGAATGTTCTTA
GGGGAAGCAAATGAGTTACGTAGAAGATAGAAGTTTGGACTTATTCGTTG
ACTAATTCCTCGGGCATGTTTTGCTCAGAAATGTAATGCTCTTTGCCAGG
GGGCAGACGGATGTGTATGTTATTAAATCTGTCCAACACACAACAATGTG
ACTTTTGCCATGTTTTGCCCCGTGATTGCCCCATAAATGAGATGTTCCAG
CTTTCTCATTGGTTAGGCTGGCCCATTGGGGATACCTTGAAATCTAGATG
TGATTTCAATATTTTTGCAAACAGACCTTACAAATTGAACTTTGCAGTGG
GGTAAAGACATGGGATTTGAAAAANAGTATCAGTAATGATGGATCATGTT
GTAGGATTGCCGGCAACTCCACACATATTTTAGTCAGTCCATGCATTGCA
CATCATCAAAAGACGTTCCTTTCTTTGAACTTCCTATTGTTGCAAGGTTC
CCAGATGTACCAGAAGACGTCTTGAAACTTAAACGTCTTGACTGGATCCA
GAGAGAGAGAGCGCTACCCGAGTGCGCCCCCTCGCTGGGACAGATGGTAT
GGCAGGTAGCGGCTGCACTCATCATCTATGACGCAATGTTTTACGTCATC
CATTACAGTGTACACAGGTATGTAGGAAATGTTTGTATGTGCACACGTGA
CCTCAACTCCCTCTCTTTCCCTCACACCGGCCAACCAGAGACGATGTCCT
TTATGTCAGGATAGGGTTGAAGATGAATATCATTTCCTAATGACATGCCC
CGCATATACTGTAGATAGACGAAAATTAATGGATATGATCACATGTAAAT
CCAGTAAACCCTTGCCAAAGGCAAACACAGACATTTTTAATCTACTTATG
TCATGCCCGGCACCATATATACGTACTTAAGCCAATACATATGTAGCGCT
CTACTAAAAGAATGTATTGTAAGTTTGTAACAGACAGAAACGTTTAACGT
ATATTATATCAGAACGCCATTTAGTTACGTCCATATCCTTGTAGTTATGG
TTTTCAGAATAGAATAGAATAGTCTAGTTTAGTATTTCTTGTATTGATTG
CCTTGTCGTTGTTGCCATACATTGTGCCATGTACAATTGTCGAGCAATAA
AGTTCATTCATTCATTCATACATCTAATTAACCCCTCAATCATAAAATGC
AGTCTTTTGATGTGAAAAGTTCTTGATATAAATATCTAGCATTGTGTAAT
AAGTTCCTATTCTAAACATTCCACAGGAACGCATTCCTGTACCGAACGAT
CCACGCCCCCCACCACGACCACCCGGCAGGTTTGCACGGCCGCGTCACCA
ACCGTCTGACGGTGGCAGAACGTCTGGCGCTGGTCCTGTCAGCTAACTTC
TCCCTGAGACTGGTGTGCGCACATCCACTCAGCAGGACAGTCTTCATCGT
GGTGTTCATAGGACTGCTGGTGGAAAACCACGCAGGGTAAGATACACGCG
TATTGTTATTGATTGTTATTCTTATTCTGTCCATGTCAAAACTCAATTCC
ATTTGTATTGTATTCATCTCCATTTGTCAGCAGGGCTAGGTCTTACCTAT
CAAAATTACCCATTCATTGCAAAGTCCTACTTGGAATTTCAATATTGGTG
TAGTTCATTGCCTGTTATAACGTTACTAACACCAAATCTTGTAACAATTT
TACAGGTGCAACATTGATGCTATGTACTATTAACTTCCATTAATTTTGAC
TATTGAGTGATATCCTACTTTTTATTAGTGCCATAATTCAGTGCCAGGGT
CTGTCAACAGCGAAGCCACTGTGTTCGAATATCAATCTGTTCTTTCTTCA
CAAATGAACCATTCATACTTGTATATACCCATAAGAGACAGTATTTGGCA
TATCAGTACCTTGCCATCTCTCTCTTTGCTCTCAAAATCTATCCTTCCAC
GTCCACAGATTTGACTTGCCGTGGAGCTATGACAAGATCATTCCATTTGG
TATCATGGGAGGGGCAGCACGACACCACGCTCATCACGTGTACGGAGCCC
GCCAGTACCAACCCTTCTTCACCTACATCGATAACTACATGGAACAGTCC
GCCCAACACCCCAGCGTGAAGGAGAACAACTTGTGATGAACAGATTATCC
CATTAAAGGTCTTTTTTTTAAATTCAATGTATTGCCCTCTACCCCAAACT
TTGAGTTCTCCTTCTTTCACACCTCGTTTGACGCATGTTTGCAACATTTC
ANTGTTTGCAACCTTTCATCAGCTGCATGATTTCTTCATCAGTAAGGCCA
TGTTGATATGGATGACATCCTTTGGGAACCCCAAAACTGATGCGAGCATG
TGAATGAAAAAAAAAAGTTTGGCAAAAAAAGTTGCCTTAATTATGAAATC
TACGTGGTCAGGAAGGTGGAACAAACGACTTAACACACAGAGTATGGTAC
AGCGAATAACAGATTCTTCTTCACATGTTCTTCTTTGACTTTGGAACTGA
TTTTGACATTCTACGACATTGGTATCGTTTTCTAATATCTTTTTTATTTA
CGGCGTATATTTGATCATTTTGCAGCTGCTTTGGTCGATTTACAGTATAG
TCGAAAACTTTTTACTTGTTTTTGGAAACGGAAGGAAATTGATGCGCGCG
CAGATGTCACCCATATAAGCAAACCAACATGACCTAATAAAGGAATAAAT
AATAACTTTATTGCAAGTTCATGCCCGAAGGCTAATTGCAGACAAACAAG
TACATGGGAATACATGGGAATCAAAAATAGTTATCTAGACTACTGTCAAA
GTTCTAAGTTAACTAAGGTTGACTATGGTTGGGTTTGACTTCTTTTTTGA
AGGCAGTGGAAAATGAAGAGACCCACGTTTTTCATCGTAAGAGGGTTTGT
TGATTTTAGTAGTGATATGGATTTTTGTAAGCTATTCAAATGGTAAAAGC
TAGGAGAATTAACGGAAGCTGTTTTATATAAATCGTTTCTTTCGGCCTCA
TATAGAGGGCATTGGCAAATGAAATGTATTTCATTTTCCACTGCGTTCAT
TGTACAAAACTTACACATTCTCTCGTGAGCGGGCAGCTTTTTATATCCAC
CCTTTTCTATTTCTAGTGGATGTGCGCTTATTCGTATCTTACACACAGCT
GACCGTTGTTCAAAATCTTTGTTGGAAAGATATTTTTCCATTGAGTATTC
TGTTTTAACATTCCTATAAAATCTTAACTTACTGTCATCGATAGATAATT
TATAAAGAAAACTTTGAATGTAAATGTCGGTCAGCCTTTTTCTTAACAAT
GTACATATATGTTGTATGTCTAGATCGAGATTGTTGGCGTTCCAGATAAA
GGAGTATCCGCTATTGTCAAGTACATCTTTCACATGTTGTAACCAGTTTT
TCTTGTTGCTATTCACTTGGGAAGACTGTTGATACAATAGAGCATCTACT
TGTAAAGGATGAGTCAAAGGATCGAGTTGTCTCAGGCGCAACCAATACTT
AACTATGCGGATTGACACATCTAAATCTACCGGGAACACTCCAAGCTCTG
CTTTACTTGCTATATTACTGGAATTTCGGTGCACTCCAAGAATATTTTTA
CAGAAACGGTTCTGTATAGTTTCAATCGGACACCTGTCATTCAAATGGTC
CTTGCCCCAAACTTCACTGCCATATAACATAATAGATTTAACACACACAT
CAAATATTCTTAACAGAGCCTTAGGGGACAGAGGTAAATGCCATTACATA
CAATAGCTAGAATGTAGAAAATGCAGTCTTTCGACATTGCTGTTGTTTGG
TAGTTTATCAGAACTAATATGATTAATGAGTTGTAAGTTCGCCAATTTCA
TCTAGCGTTCGTTGACTTATATCATAATTTGCGTTGTATACGACGTAGCG
GTACATATTGTCGTGCGATTCTTATTATTGTCCACTTTGGGCACGTTCAC
GTGGCATGTCGAGGTGTATCATGCAAACGCCAGCTCTCATGAGCAATAAA
GAACGACATAAGTATGAACCTAAGGCTTAGTCGTGACTCTCCTTTCAACA
AAGCAATGGTCATGAAATAGGTTTGCGAACAGAATAAACTCATGAGGCTG
TATTTTCTCGCACTATACAGCACTAGAAGGAGAAAGGCTCAAGTGGACGA
TAAACGGTCCCCCTAGCCCAATTCTTCATCATAGACCTCTATAAATGAAT
GCTCACACGACGTTAAACAAACGGAGAAAGTTACAGACCATGTATTATTC
ACTTTAGAAGAGCTGATATTTCTTCCCATGGATTACACATTTGACTCTGC
CCGTGTTTTTAGAGAATGGACGTTCTGAATATATCTCGCGATAATTGGTA
CCGTTACGTTACAGTGAGTAGAGTACTGCCGTTGCGGTAACGTTTCGTCT
GTATGTCAATATTGTGTTAAATACGACTGTAACGCTGACTCAACATGTCG
TACATTGTTTTTACAAAGACTGTATTCAACTTCATACAAAATGTACAGCT
GTAGATCGATTACAAATAACTGCACAGACAACGTAAAACAGTTTCATACA
TATTGTGACCATTTGTACCTTCTAGTATATATCTAGCCTCCGTGGCAGAC
TCCTTCCGGCTGTTTTCTTTTTTAAGTTACAGTTTTATTATTACATTTTT
TTGCGACGCCTCAGGAGCGAGCCTAATAGTATACTTTACGCCCGATCTGC
AAGAATTCCCAGAATTGTACAGGCATGTCTGGAATTTGTTCGTGCATAGT
TGCAACATATGAGTATTCCCTGGGGAATTTGTTTTGAAGTGGCCTGTCCC
TCTGTTGAATTGGAAGTAACAGGGTTGGCAAATAGTTTGATGGAATGTTT
TGTCAAGGATTTTCAAAATGTATGTCTTTGATGTAATCGGGTAGTAATTA
CGGTTGTTTATTATAGCGTTTATTGTTATGATCTATACATGTTTATATAA
AGATGTTTTGTATGTAACAATGGCGAATAATATGTGGCACATATTTTTGG
TTGATTAGATGCAATTAGAATGAATACGGATAGCTTGATGTTTTAAAAAA
CCTTTGTTGTTTGAATGAGTGACTCAGTNCCCACATTTTTGGTTGATTAG
ATGCAATTAGAATGAATACGGATAGCTTGATGTTTTAAAAAAACCTTTGT
TGTTTGAATGAGTGACTCATTTGCAAGTAGTGTATATGTCATCAGTTTTG
AGATAGTTGCAATGATCTACGTTTCGAAGAAAAAGGACAGCTATAGTATG
GTTATATTCTTATTTTAAGAACATGATAAAAACATATCAATTTGTTTTGA
AGCAATGTTGAATATTCCACGACCCGGCACAGATACGGACATGTCAATGT
TTTACGAGATAGAATCGATAACTGTAATATGGATGGAATAGGGGACTCTT
ATATTGATCTGTACATCGTTCCAAAGGCAGATAAAATACAAAATAACAGA
TAACTGGGTGAAACTTTACTACATTGTATTTGTTTTGGATTAACAAGTTA
GTTGCCGTAGTGGGTCGGCATTGCACTTTAGGGAGACTTTGAGTATACAC
ATGGAAACACTACAATGATATAGACGAAAGATATCATTGGGTACAGAGTT
AAGAGGTGCTCAATTTTTTTGCTAGTAACGTACTTACGTCATTCGTATCA
AAGTGCATTCATGATCATTTGATCAAACTGTAAGTTCTAAATATCATAAT
GTTATACAAGATAGAAACGTGAACAGTAATACGAATACAATTGTGGCTCC
TATATTGTCCTGTACATCGTTACAAAGTCAGATGGAATACAAAATATATA
ACACAAAGTTGGGTGAAACTTCACTATTTCTTTTGTATTACCAAGTTTGC
TGTCTTAGTGGTTCGGCATTGTATTTCATGGCGGTTTTGGGTATACACAA
GGATACAACAGAATGATATATACAAAATATGTAATTTTGTACAGTGACAG
TGTTAGAAGGTGCACAGTTTTGAGGCACAACCAGACACAGAACGTCTTGA
GGAGACACTTGCATGGCTTGGTATGGAATGAAG Coding sequence (CDS) from alignment at Sc0000236:266224..274756+ >BlTCONS00114505 ID=BlTCONS00114505|Name=BlTCONS00114505|organism=Branchiostoma lanceolatum|type=CDS|length=699bp|location=Sequence derived from alignment at Sc0000236:266224..274756+ (Branchiostoma lanceolatum)
ATGGCACAAGTCTCGTGCTTCTCCCGGTACCGTCTGGAGCGGAGTTCAGC
AGCGCCCCGCCCCTCCGTTCCCCAGCTCATGACGGAGGGAACCCTGTACA
TGCTACCTTTAGCTGCGCTCGACACAGTTATTGTCAAAAGGTTCCCAGAT
GTACCAGAAGACGTCTTGAAACTTAAACGTCTTGACTGGATCCAGAGAGA
GAGAGCGCTACCCGAGTGCGCCCCCTCGCTGGGACAGATGGTATGGCAGG
TAGCGGCTGCACTCATCATCTATGACGCAATGTTTTACGTCATCCATTAC
AGTGTACACAGGAACGCATTCCTGTACCGAACGATCCACGCCCCCCACCA
CGACCACCCGGCAGGTTTGCACGGCCGCGTCACCAACCGTCTGACGGTGG
CAGAACGTCTGGCGCTGGTCCTGTCAGCTAACTTCTCCCTGAGACTGGTG
TGCGCACATCCACTCAGCAGGACAGTCTTCATCGTGGTGTTCATAGGACT
GCTGGTGGAAAACCACGCAGGATTTGACTTGCCGTGGAGCTATGACAAGA
TCATTCCATTTGGTATCATGGGAGGGGCAGCACGACACCACGCTCATCAC
GTGTACGGAGCCCGCCAGTACCAACCCTTCTTCACCTACATCGATAACTA
CATGGAACAGTCCGCCCAACACCCCAGCGTGAAGGAGAACAACTTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00114505-exon-Sc0000236-1564993656:266224..266408 | BlTCONS00114505-exon-Sc0000236-1564993656:266224..266408 | Branchiostoma lanceolatum | exon |
| BlTCONS00114505-exon-Sc0000236-1564993656:268339..268689 | BlTCONS00114505-exon-Sc0000236-1564993656:268339..268689 | Branchiostoma lanceolatum | exon |
| BlTCONS00114505-exon-Sc0000236-1564993656:269220..269390 | BlTCONS00114505-exon-Sc0000236-1564993656:269220..269390 | Branchiostoma lanceolatum | exon |
| BlTCONS00114505-exon-Sc0000236-1564993656:270000..270209 | BlTCONS00114505-exon-Sc0000236-1564993656:270000..270209 | Branchiostoma lanceolatum | exon |
| BlTCONS00114505-exon-Sc0000236-1564993656:270682..274756 | BlTCONS00114505-exon-Sc0000236-1564993656:270682..274756 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000236 | genome | Sc0000236:266224..274756 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF056170 |
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