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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000236:189582..195471+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00114495 ID=BlTCONS00114495|Name=BlTCONS00114495|organism=Branchiostoma lanceolatum|type=mRNA|length=5890bp|location=Sequence derived from alignment at Sc0000236:189582..195471+ (Branchiostoma lanceolatum)
ATTTGTCGTCTCCTATTAACAAACCTCATGAAATGTACCATGGGATAGTA
GTGATCCTGCTGTTTCACTGGTTAGTGTTGAATAAAACAAATTAAGGTTA
TTTTATTGCCTTCGCCGCAGACATAAGGGTATATTTTTGGTCGGGATTTG
TGGAGTGATGGTGTTGGCGATATAACTCTTGATGCCATGGATGGATGTTG
GTGATTTTTGGTAGGTAAGTTTCTGTTGGGGAGACAAAGGTCAAGTTCGA
AGATGGGTCTTCTGGGGAGGATAACTAAAGCAGGGTTTGGCGGATCTCAA
TTGTTATGGGTGGGTAGAAACGATTAGTGATTATTAACATAATGAGATGC
AAATCAGGTCATTCTTTCCATAATTAATGAGAAAAAGTTGAAATTCCCTT
TCAATTTGCTATTTCTTGGATGATGACCTATATATGAATGAATGAATGAG
ATACGAGGACACATATATACAGGACACTGCCCACATGTTTGGGTTAAGGT
TACCATTTGGGCCACTATCCTAGTTGGGGCTGGCACCCTCCCTGTCCCTG
GGTAGGAAGGGGATGCTGTCAGGGCCAGCGTTTAGGTGGCTCTAATTTGA
CAGCTCCGTGGATCTACCATGTGTTTTTCCACCATGATGTCAATTAGAAA
GACCAAAGAAGATTAAACCTCTGTCAGGTCGACCAGAAGAAACCAGCTTA
GCTAAGAAACTCATATGTATANGACTGTATATTTGAACACAAACTTATCA
TGGCAGTGTGGGGTTCGCGAAGAGCAAAGTAGCCTTCTAAGAAAGAAGAC
TTTGCGTATAATAATGCCATGATTCCAAAGTTGTAAATAATGGTAATTTG
ATACTTGCATTCAGAAGTTGAATGAAGGTGAACATCATCATACATTAAGT
ATTCAATCCATAATATTATGAATTGTTAGATTTATGTTATTTTTGTTGAT
TTAGATGGGGGAAGACCTTGTATAAGCCACTATGGCTTTTTTTCTTCCCC
CAGCACATGTTTTTTTTGTTGTTCTATTATGTAAAATTGATTTTAATATG
TGCGAATAAACCAAACCAAACCAAACCCACCTTTCAAACCTTTCGTACAA
GTTAACACCATTCGGCGAAGGTATGGGATCACCGAACTAGTTGTTATCTG
TGGTACATTCAGTGACTGTTTTTTACAATATCTATTTGCCAGGAGAACGC
GGAGAGCGCCAGTTTTGCTCGCTCCTCTCACAGGATGAGTCGGCCTGCCA
GGAGACCAATCAGGTTCAGCGATTTCCCGCAGAAATCGGCCGAGGAACTG
CGAGTGTTAGAGAGACGTTTTGTTCTGGACTGCGTGGCTGTGGCCAACAT
CTCACAGGACTATGGGAAGGTAAAATCTACAAATAACTTCGGTAAACTTG
CAAGACAAATTGAGTCCACAGTTCTAACACATACAGAACTTTCAAGTTGA
CAGTATTCATATACTGTCACATATTCATTATGGGCCCTGTTTGGGGGATT
TGGGGGTGATCAATATTTATTTGTTACACGCCTTTCCTTTATTGGTTTAC
AAGTATGACGTCCAATCATTTACCACAAAGGTACAATAGCCCTTTCTGAT
CATTTATGCAAATCAAATATGCAAACGAATATTCATTTTCAAAATTGTTA
TCTAGTAATATTTTGCTCACTCTCATGTGTATCAAATGTATCAAAATTCC
TATAGTGGAAGGAATACGGAATAATAAAATGTCCTTGTTGACCATGCAAA
GCTTAAACTTTAAAGCCTAAATTACTTTGCACTCTTTGCATACACTGATT
ATGTGAAACTCAAGGTATCCACATGAGCTATAATAAAAATCCAATGCTGT
ATTCTGGTTCCATCCTAGGCCAATCCGAAGATGGGGACAGCCATCCCACC
CTACAACGCACAGAAGGACAAACATGTGGAGCCTTACTTCAACTTTTATG
GAGTGAAAGAGGTGTTGAAGACTACAGGACAGGTTAGAACACTTTCATAT
TTTGGTGGTTCAATGTATATCACTTTGTAGCATTACACAATCGCTCACTG
TCAGGGCTTATTGTAATCAACACAAAATTTAGAGGTGTTGGCCAGAGTTG
GGACTGCTAGAAGCCTGATCTTGTCAGGCTACATGACTTCAGTAATCAAA
TAGCATCTGATATACCAATGGTACATACATGTGTTCATATAGAATTTGTA
CTACCGGTACATATTATCTGCATGTAACATGGTAACACCAAGAACCAATT
TTTTGCTATTGGAGTCCAAAGTCCAGTTTGATAGAACCAGACATGAATAT
GACTGCTGTTTCCATAGCTTTTGGGCTGCATGCTACTGATACTTTTATAG
CCCCTCAGTATACAGTCAAACCTGGCCAAGCAACCACCTGGCACAGGCAA
CCAGCAACCACTTTTTTTCAGTCCCAAATGGGCCTTCACACTCCCCTGAA
CAACCAAATTTGATTGACAGCAGCATCCAACCCAGTAGCGGCCTCTTGAA
AATGAGGATTTCTGCACGCTCTGGCACTATCAGCCATTCATTCAATTTTA
ACACCAGAATCAGGAAAACAATTCTTATACACTGTATTCTTCACAACAAT
ACCAGTAACACCATTCTAAACATAGATGCAGTTGAATTAGTTAAGATGCA
CTTGAATTAGTTAAACTGCCCCTTTTTTGTGTCATCAGTTAAAATCAGGA
AAGCACATATCAAATACTGCACAAAGTACAAATTAAGCTAGTTAGAATTT
TGACATATATACTAAAGAAACTACATTTGTAAATGCACTTGTTTTGACTG
TTCTAGGAGCAGACAATTACAAAAAACATGTTTGATTGTTAGATAAACAC
AGTTCTGATGGTAAAACAATGGTTTAATGGAATGTGTTAACATAACAGCA
TGGAGATTAAAAACTGTTGTGCATCTCTTGTAGATATGTTTCTGGAAACT
AATAATAAAGGTGTATTTCGTCCAAATGTATGATTTTTTTACCCAGTCCC
TTGAGTGGTTGCTTGCGACAGGTTTGACTGTACTTAGATGCTCCCGTGAA
GACCCAGACTGTCCACTATACTGAAGGACACATCAAATCAATACATCGCT
TGAAGTCACCAAGATGTATTTCTTTTCAGAATGGAAATAAGAGTTCCTCG
ATCGATGGTCCCGTCATCGACCGTTTTGTCAGTCTGGGTAAAGGCTATCA
GTACCTGTCCAAGAGGAACAAGTTTGGAGCTGGTAAGGGGAACAACTCAA
TATCACTCAATGGAAAAAAACGGTTATAGTTGGACATTCATACAGATAAA
CTATATTGAATCTCAAAAGGGATGTACAACAGTTTTATGTCAGCAATCAT
TTGGGGATGAAAATACATAACTACGTCTTGATTGTATATTTTAGATTTAA
AGAATACATTAATTTTTCTAAACCATTCTGCAACAACACACCATACATTC
AGAAATTAAAGGGGAACACAATCCCTAATCTAAAAAGTAAGAGAATTCCT
ACCTACCAGACCTACTTTTTTCAGGACTGTTAATTGGAAATACAACATTT
TTTTCCTAGGCCTTTTTAGTCTCTTTACAAGACAGCTTTGCAATCTGTAG
TTCAGCAGCAGCATTATTCCATGATATCACAGACCACTCTTTATTTATCA
CTGTTGGAAAACATGTTTTGTGAACTAAATTTACATTCATTTTTATGTCC
AAAACTGGAGCACGTCTTGTTTCGTCTCCTCAGGGCACTCCAGAGAAGGG
GCTGATGGTCATGGTCAGTTCATGACAGGCGTGCAGCCCATGTTCGGCTA
CCGTGGCCTGTACGGATTCAGAAGGAACACGCCCTGGCTGCGAAACGTTC
CCTCGACATTTGGAGTCGACCCTCGGTCACCAATGCACGCCAAAGAGCGA
CTTCCACCCATTTACTACCGACGTCAGGCAGGCTGGGCAGCTAGCATATG
AACAGAGTTGTGTACGAAAGAAAATCTCCAGGTTCTGAAGAATGGTGTGA
CTGTCTGACATTGCAAAGCAGTTTTAACAACATCTCAAGGGTGAAACCAA
TTGATGATGAAGACTTATAATATCTATTTTTGCCAAAGGTTTAAGTAATG
TTAAGATTTTTCTTCTAAAAAGACAGTGTGTGTCCTAAGCTTTACACTGT
CAGGGAGTAGCCTCCACCAGGCCTTTCTGTGGGGGTATGGATCACAGAAT
TGGGAAAAAAGTTCAGTCAGTCAGTCTGCCAGAAGGCTAACATTTCCGCC
TGACCAGTGATGAAGCCCTTTAGTCCCCAAACTCCCCTGGCAAATTTATT
CTCCCTACAACCAGTCAGTGTACATGATGTAGTTAGTCTGGTAGAGGCAG
GTCAGGAAGACTTGTTATTCAATATTAACCTCATTTCCAGCTAGACAGTC
AAATTTAACAAGTTGGGCTTAATACCATAACATGTACTCAATAAATGGGA
GGCAGAAGAAGTGATAGACATTTTCTTTATTGTTAAGCTGACTCCATTAT
ACAGTACTGTAGCTGAAATGCAAAAAGCCACAAGCTCTGACATAGAAGTA
CACTACACTGCTCAGACTGGCATGTCAGGGCTGCACACATGGTTTAGTCT
AAGACAAGTTCTATCTGAGCATCTCAGTCTAGAATTGGCAAGAACTTTTT
AAGTAGATTGGTGGGCACTTCAGAAATGTGGTAAAGAGAGAGGTTGTATA
CATCATAATGTAGCAACTGTAAGTCCCTCTCTTTTTCAACCTGCACAGTA
GCAAAATGTTGTCATGTATAATGTACATATGTAGTCAAGTAGTCAGCGCT
GCTGTAGGAATGTATTGGATATTGAGTGAAGTTTGGCAAACATTGCAGTT
ATACAATGTATCTAGAGCAGTCAGGTGTCTGAGTTTCTGTATTTGCCTGT
TTGGATGTTGTTTATACTTTGTACCTCCTAGAGCAGCCTTAACGCAACAA
ATATCTTCAATCTTAACTGGACCAACAAATAGTCTACACCAGTCAAATTG
ATAATAGTACATTCGTCAGTAACAGAAATTAATTTTACACTATATTTTAC
TGTAGCTATGTAAGTTTCACAGTAATATATGATGAAACAATTATAGTAAT
TGAATATCTTGGCAACAATTCTATAATTACACACCTTGTACATGTATTTC
ATGTTGATAGCATTAGCACATGAACTTCCTAAACGTCTTTGGATTTTAAG
CTAAACAGATTGAGAGTGATTGTTAATTGTGCTTCTTTCCCTCATTTCAT
TGTCGCATGATTGAAGAGAAAGTTTGATTCCTACTCATGAAGCAGGTTTC
CAACATGTCGAAGTTGAAATCTGTGTATTATGCAACCAACCAAAGCTGAG
TTGGCAAACATTGTACTAATATTAGTATACAATGTAACTCAACATTTCCT
ATACAAAGACTGATGGATCAGGAATGATTACAAAATGTGATCGGTTATTG
GGTATTGGTTTGATTTTTCTCCTCCTTCTTCACTCACTTAGTCCTTAGCC
AAAAATGATACACAATACGATCTAGCTTTTTTGTCCATCCTTTCTGTTTG
AAGTCTTAATAAAAATGATCTTTAAAGATTAAGTTGCCTAATTACCACAT
TCCTTCCGCCCCCATAAAAGCACTGGATGTACATGACTTGTACATAATTC
CTTGACAAAGCCTATTCAATACAAAAGTGGGTCACCTTTCTTGCACAGAA
TTACATTTGTGTCCTCCTTTTCTTTGTTCCATACAAAAGTATATATATAT
ATATTTCAATTACTTGGTCATTCTCCTTCATTCTCTTTTCATGTTTGCAA
ACAGAAGGGCACTTGTGGAGACAGATAGCTGAAATACAAACTACTTTCAT
TCAACACTTTGGCAAATGGATATGAGTCTGTATCAATCCC Coding sequence (CDS) from alignment at Sc0000236:189582..195471+ >BlTCONS00114495 ID=BlTCONS00114495|Name=BlTCONS00114495|organism=Branchiostoma lanceolatum|type=CDS|length=399bp|location=Sequence derived from alignment at Sc0000236:189582..195471+ (Branchiostoma lanceolatum)
ATGAGTCGGCCTGCCAGGAGACCAATCAGGTTCAGCGATTTCCCGCAGAA
ATCGGCCGAGGAACTGCGAGTGTTAGAGAGACGTTTTGTTCTGGACTGCG
TGGCTGTGGCCAACATCTCACAGGACTATGGGAAGGCCAATCCGAAGATG
GGGACAGCCATCCCACCCTACAACGCACAGAAGGACAAACATGTGGAGCC
TTACTTCAACTTTTATGGAGTGAAAGAGGTGTTGAAGACTACAGGACAGA
ATGGAAATAAGAGTTCCTCGATCGATGGTCCCGTCATCGACCGTTTTGTC
AGTCTGGGTAAAGGCTATCAGTACCTGTCCAAGAGGAACAAGTTTGGAGC
TGGTAAGGGGAACAACTCAATATCACTCAATGGAAAAAAACGGTTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00114495-exon-Sc0000236-1564993656:189582..189651 | BlTCONS00114495-exon-Sc0000236-1564993656:189582..189651 | Branchiostoma lanceolatum | exon |
| BlTCONS00114495-exon-Sc0000236-1564993656:190774..190950 | BlTCONS00114495-exon-Sc0000236-1564993656:190774..190950 | Branchiostoma lanceolatum | exon |
| BlTCONS00114495-exon-Sc0000236-1564993656:191450..191563 | BlTCONS00114495-exon-Sc0000236-1564993656:191450..191563 | Branchiostoma lanceolatum | exon |
| BlTCONS00114495-exon-Sc0000236-1564993656:192711..195471 | BlTCONS00114495-exon-Sc0000236-1564993656:192711..195471 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000236 | genome | Sc0000236:189582..195471 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF056167 |
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