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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000236:187281..195471+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00114492 ID=BlTCONS00114492|Name=BlTCONS00114492|organism=Branchiostoma lanceolatum|type=mRNA|length=8191bp|location=Sequence derived from alignment at Sc0000236:187281..195471+ (Branchiostoma lanceolatum)
GGACAAGGTAAGGGTAAAGTAACGTCAGAACGTAAACGCACGGGACAAGG
TAAGGGTAAAGTTACGTCAGAACGTAAACGCACGGGACATTAGGTAAGGG
TAGAGTTACGTCAGAACGTAAACGCACGGGACAAGGTAAGGGTAGAGTTA
TGTCAGAACGTGAACGCACGGGACAAGGTAAGGGTAAGGTTACGTCAGAA
CGTGAACGCACGGGACAAGGTAAGGTAGAGTTACGTCAGAACGTGAACGC
ACGGGACAAGGTAAGGCAAAGTTACGTCAGAACGTAGCTTTTCACCTCTG
CTTGATATTTCTACCAACGTTATATCAAATATGATATCTAATTCTATATG
TTGTAAAACTTGATGTATCTTTTTTTACTCTTGATTGAGAGTGACTCAAA
CTTCAATGTTTAATCTTTGGTATCTTATTTTGCATTATGTCAGTTAAGAA
ATGCCTAGCCGTTGATGCCCTTGTTGACTCTTGTTAGTCGTGACTATGAA
TTTCAGAAGTTGAAGGCAATGAGTGAGTGAGAGAGAAGTTTGCAGATGAA
TCTCTTTTCTCTCGTCTCAGAACTGGGACACACCTTTGCACCTGGCGACC
TATCACGGAAATAACAAAGCTGCACGTCTATTGGTGGAGGCTGGAGCAGG
ATTGGATAACGAAAACAAAGTGAGTCAATCAATCAATCAATCAATCAATC
AACCAATCAATTGATCAGTCGATGAAAGCTGACATATTGACTGCTTATGG
TGGGGTACAGCACAAACTCATAGAATAAGAATAACGTTATGATTCTCCAA
TGGTTCAGCTTAGTATATGTTAATTCCATGGCATTCCAGAGGGGAAAAGT
TCCAGAGGATCTTGCCTTTGAAGAGAGCACGCCTGTTGGGTGTAAGAGTC
CGGAGTCCCGGAACAGCCTNATAACATTATGATTCTCCAATGGTTCAGCT
TAGTATATGTTAATTCCATGGCATTCCAGAGGGGAAAAGTTCCAGAGGAT
CTTGCCTTTGAAGAGAGCACGCCTGTTGGGTGTAAGAGTCCGGACTCCCG
GAACAGCCTTCTGAAGGGAAGACAGAGGATTCTTCACATCATCAAGCGAA
TTAAGGTAGGTTTTGGGAGGAAAGTCAGATGTTTAAAAGTCAGCAAGGGA
AATATTTGCATTTGGTTTGCAAATGCAGGTTATACTTATGACTACACATG
TAGTTGTTACTAGATTTGTATTCAATAANACATGTACATCTAGTTGTTAC
TAGATTTGACTAGATTTGTATTCAATAACACTAGGCAACAATTGGCAATA
TCCATGTTGGTTCTAAATTCCTGGGAACAACAAGAGTTCGGAGACCTCAT
ATTTCCATGAACTATTCTGTTTATGCAAATGACTTACACATTTACATAAT
ATATGCTTGGTCATAAACACCTTTATCTAACTTACACATGTTGCAAGTCA
GTCAGTCCTATCAGTCCTATCATTTTCCACTTAGATGGATTCTGGCACTT
TTGCATTAATTATGCAAATCAGGAATTTATTTGCATGATTGTTATCTGTT
GATGCTCCACTTGCCATAAACTACATATGTTACATGTATCTATCTGAGTC
TTATAATGGAAAACACTGCAAATATAGATTTTCCTCATTAGTTATGCAGA
TTAAGTCCAAATTAGCATAATTTGCACTTCATTGTGTACATCTCTGTCTA
AGCTACCTGCATACTAAATATCATGGAAATCCGTCGTTCCTTTGTTCAGT
TATTCTCCTTAGAAGATTTTCACAATAACGCCACTGCAGTTCCAGAGCAA
GCTGCTTGGGGGCTAAAATCTACACCACTTCTTTATTACATCACAAGCTA
TCTGCCACCCACAAATCAAGACCATAGCACGCCCAGGTCAAAAGATACAA
AAGCGGAAATTCTGCTGCAGTACAAAGGTCACATACTAGGGGGCCCAAAA
TCGACCTTGAATTTCGGGTTCACAACACCCGCCCACATACCAAATATCAT
CGCAATCCATCAAGAGGTTCTTGAGTTATGCTGACATGGAGATAAATATT
CCCGGTCAGATTTCATGATGAAACTCTGCCGGCCAGTAAGTGACAATTCT
TCAGTTAACAATTTGACATGACTGGACCAATTAGCCAGGAGGATTATGCA
ACCCTCTGGTCTCATTGTGTGAATAAATGTTGGGTAAATTTGTAACCATA
TACATGTAACGTTAACAGGGTGTGTGTGTTTGGTTTAAAAGGACTTTGCT
CTTACTTTTGTTGTGTTGACACAGTGCAGAGTACACGGCGCTGTAACATA
TATTTGTCGTCTCCTATTAACAAACCTCATGAAATGTACCATGGGATAGT
AGTGATCCTGCTGTTTCACTGGTTAGTGTTGAATAAAACAAATTAAGGTT
ATTTTATTGCCTTCGCCGCAGACATAAGGGTATATTTTTGGTCGGGATTT
GTGGAGTGATGGTGTTGGCGATATAACTCTTGATGCCATGGATGGATGTT
GGTGATTTTTGGTAGGTAAGTTTCTGTTGGGGAGACAAAGGTCAAGTTCG
AAGATGGGTCTTCTGGGGAGGATAACTAAAGCAGGGTTTGGCGGATCTCA
ATTGTTATGGGTGGGTAGAAACGATTAGTGATTATTAACATAATGAGATG
CAAATCAGGTCATTCTTTCCATAATTAATGAGAAAAAGTTGAAATTCCCT
TTCAATTTGCTATTTCTTGGATGATGACCTATATATGAATGAATGAATGA
GATACGAGGACACATATATACAGGACACTGCCCACATGTTTGGGTTAAGG
TTACCATTTGGGCCACTATCCTAGTTGGGGCTGGCACCCTCCCTGTCCCT
GGGTAGGAAGGGGATGCTGTCAGGGCCAGCGTTTAGGTGGCTCTAATTTG
ACAGCTCCGTGGATCTACCATGTGTTTTTCCACCATGATGTCAATTAGAA
AGACCAAAGAAGATTAAACCTCTGTCAGGTCGACCAGAAGAAACCAGCTT
AGCTAAGAAACTCATATGTATANGACTGTATATTTGAACACAAACTTATC
ATGGCAGTGTGGGGTTCGCGAAGAGCAAAGTAGCCTTCTAAGAAAGAAGA
CTTTGCGTATAATAATGCCATGATTCCAAAGTTGTAAATAATGGTAATTT
GATACTTGCATTCAGAAGTTGAATGAAGGTGAACATCATCATACATTAAG
TATTCAATCCATAATATTATGAATTGTTAGATTTATGTTATTTTTGTTGA
TTTAGATGGGGGAAGACCTTGTATAAGCCACTATGGCTTTTTTTCTTCCC
CCAGCACATGTTTTTTTTGTTGTTCTATTATGTAAAATTGATTTTAATAT
GTGCGAATAAACCAAACCAAACCAAACCCACCTTTCAAACCTTTCGTACA
AGTTAACACCATTCGGCGAAGGTATGGGATCACCGAACTAGTTGTTATCT
GTGGTACATTCAGTGACTGTTTTTTACAATATCTATTTGCCAGGAGAACG
CGGAGAGCGCCAGTTTTGCTCGCTCCTCTCACAGGATGAGTCGGCCTGCC
AGGAGACCAATCAGGTTCAGCGATTTCCCGCAGAAATCGGCCGAGGAACT
GCGAGTGTTAGAGAGACGTTTTGTTCTGGACTGCGTGGCTGTGGCCAACA
TCTCACAGGACTATGGGAAGGTAAAATCTACAAATAACTTCGGTAAACTT
GCAAGACAAATTGAGTCCACAGTTCTAACACATACAGAACTTTCAAGTTG
ACAGTATTCATATACTGTCACATATTCATTATGGGCCCTGTTTGGGGGAT
TTGGGGGTGATCAATATTTATTTGTTACACGCCTTTCCTTTATTGGTTTA
CAAGTATGACGTCCAATCATTTACCACAAAGGTACAATAGCCCTTTCTGA
TCATTTATGCAAATCAAATATGCAAACGAATATTCATTTTCAAAATTGTT
ATCTAGTAATATTTTGCTCACTCTCATGTGTATCAAATGTATCAAAATTC
CTATAGTGGAAGGAATACGGAATAATAAAATGTCCTTGTTGACCATGCAA
AGCTTAAACTTTAAAGCCTAAATTACTTTGCACTCTTTGCATACACTGAT
TATGTGAAACTCAAGGTATCCACATGAGCTATAATAAAAATCCAATGCTG
TATTCTGGTTCCATCCTAGGCCAATCCGAAGATGGGGACAGCCATCCCAC
CCTACAACGCACAGAAGGACAAACATGTGGAGCCTTACTTCAACTTTTAT
GGAGTGAAAGAGGTGTTGAAGACTACAGGACAGGTTAGAACACTTTCATA
TTTTGGTGGTTCAATGTATATCACTTTGTAGCATTACACAATCGCTCACT
GTCAGGGCTTATTGTAATCAACACAAAATTTAGAGGTGTTGGCCAGAGTT
GGGACTGCTAGAAGCCTGATCTTGTCAGGCTACATGACTTCAGTAATCAA
ATAGCATCTGATATACCAATGGTACATACATGTGTTCATATAGAATTTGT
ACTACCGGTACATATTATCTGCATGTAACATGGTAACACCAAGAACCAAT
TTTTTGCTATTGGAGTCCAAAGTCCAGTTTGATAGAACCAGACATGAATA
TGACTGCTGTTTCCATAGCTTTTGGGCTGCATGCTACTGATACTTTTATA
GCCCCTCAGTATACAGTCAAACCTGGCCAAGCAACCACCTGGCACAGGCA
ACCAGCAACCACTTTTTTTCAGTCCCAAATGGGCCTTCACACTCCCCTGA
ACAACCAAATTTGATTGACAGCAGCATCCAACCCAGTAGCGGCCTCTTGA
AAATGAGGATTTCTGCACGCTCTGGCACTATCAGCCATTCATTCAATTTT
AACACCAGAATCAGGAAAACAATTCTTATACACTGTATTCTTCACAACAA
TACCAGTAACACCATTCTAAACATAGATGCAGTTGAATTAGTTAAGATGC
ACTTGAATTAGTTAAACTGCCCCTTTTTTGTGTCATCAGTTAAAATCAGG
AAAGCACATATCAAATACTGCACAAAGTACAAATTAAGCTAGTTAGAATT
TTGACATATATACTAAAGAAACTACATTTGTAAATGCACTTGTTTTGACT
GTTCTAGGAGCAGACAATTACAAAAAACATGTTTGATTGTTAGATAAACA
CAGTTCTGATGGTAAAACAATGGTTTAATGGAATGTGTTAACATAACAGC
ATGGAGATTAAAAACTGTTGTGCATCTCTTGTAGATATGTTTCTGGAAAC
TAATAATAAAGGTGTATTTCGTCCAAATGTATGATTTTTTTACCCAGTCC
CTTGAGTGGTTGCTTGCGACAGGTTTGACTGTACTTAGATGCTCCCGTGA
AGACCCAGACTGTCCACTATACTGAAGGACACATCAAATCAATACATCGC
TTGAAGTCACCAAGATGTATTTCTTTTCAGAATGGAAATAAGAGTTCCTC
GATCGATGGTCCCGTCATCGACCGTTTTGTCAGTCTGGGTAAAGGCTATC
AGTACCTGTCCAAGAGGAACAAGTTTGGAGCTGGTAAGGGGAACAACTCA
ATATCACTCAATGGAAAAAAACGGTTATAGTTGGACATTCATACAGATAA
ACTATATTGAATCTCAAAAGGGATGTACAACAGTTTTATGTCAGCAATCA
TTTGGGGATGAAAATACATAACTACGTCTTGATTGTATATTTTAGATTTA
AAGAATACATTAATTTTTCTAAACCATTCTGCAACAACACACCATACATT
CAGAAATTAAAGGGGAACACAATCCCTAATCTAAAAAGTAAGAGAATTCC
TACCTACCAGACCTACTTTTTTCAGGACTGTTAATTGGAAATACAACATT
TTTTTCCTAGGCCTTTTTAGTCTCTTTACAAGACAGCTTTGCAATCTGTA
GTTCAGCAGCAGCATTATTCCATGATATCACAGACCACTCTTTATTTATC
ACTGTTGGAAAACATGTTTTGTGAACTAAATTTACATTCATTTTTATGTC
CAAAACTGGAGCACGTCTTGTTTCGTCTCCTCAGGGCACTCCAGAGAAGG
GGCTGATGGTCATGGTCAGTTCATGACAGGCGTGCAGCCCATGTTCGGCT
ACCGTGGCCTGTACGGATTCAGAAGGAACACGCCCTGGCTGCGAAACGTT
CCCTCGACATTTGGAGTCGACCCTCGGTCACCAATGCACGCCAAAGAGCG
ACTTCCACCCATTTACTACCGACGTCAGGCAGGCTGGGCAGCTAGCATAT
GAACAGAGTTGTGTACGAAAGAAAATCTCCAGGTTCTGAAGAATGGTGTG
ACTGTCTGACATTGCAAAGCAGTTTTAACAACATCTCAAGGGTGAAACCA
ATTGATGATGAAGACTTATAATATCTATTTTTGCCAAAGGTTTAAGTAAT
GTTAAGATTTTTCTTCTAAAAAGACAGTGTGTGTCCTAAGCTTTACACTG
TCAGGGAGTAGCCTCCACCAGGCCTTTCTGTGGGGGTATGGATCACAGAA
TTGGGAAAAAAGTTCAGTCAGTCAGTCTGCCAGAAGGCTAACATTTCCGC
CTGACCAGTGATGAAGCCCTTTAGTCCCCAAACTCCCCTGGCAAATTTAT
TCTCCCTACAACCAGTCAGTGTACATGATGTAGTTAGTCTGGTAGAGGCA
GGTCAGGAAGACTTGTTATTCAATATTAACCTCATTTCCAGCTAGACAGT
CAAATTTAACAAGTTGGGCTTAATACCATAACATGTACTCAATAAATGGG
AGGCAGAAGAAGTGATAGACATTTTCTTTATTGTTAAGCTGACTCCATTA
TACAGTACTGTAGCTGAAATGCAAAAAGCCACAAGCTCTGACATAGAAGT
ACACTACACTGCTCAGACTGGCATGTCAGGGCTGCACACATGGTTTAGTC
TAAGACAAGTTCTATCTGAGCATCTCAGTCTAGAATTGGCAAGAACTTTT
TAAGTAGATTGGTGGGCACTTCAGAAATGTGGTAAAGAGAGAGGTTGTAT
ACATCATAATGTAGCAACTGTAAGTCCCTCTCTTTTTCAACCTGCACAGT
AGCAAAATGTTGTCATGTATAATGTACATATGTAGTCAAGTAGTCAGCGC
TGCTGTAGGAATGTATTGGATATTGAGTGAAGTTTGGCAAACATTGCAGT
TATACAATGTATCTAGAGCAGTCAGGTGTCTGAGTTTCTGTATTTGCCTG
TTTGGATGTTGTTTATACTTTGTACCTCCTAGAGCAGCCTTAACGCAACA
AATATCTTCAATCTTAACTGGACCAACAAATAGTCTACACCAGTCAAATT
GATAATAGTACATTCGTCAGTAACAGAAATTAATTTTACACTATATTTTA
CTGTAGCTATGTAAGTTTCACAGTAATATATGATGAAACAATTATAGTAA
TTGAATATCTTGGCAACAATTCTATAATTACACACCTTGTACATGTATTT
CATGTTGATAGCATTAGCACATGAACTTCCTAAACGTCTTTGGATTTTAA
GCTAAACAGATTGAGAGTGATTGTTAATTGTGCTTCTTTCCCTCATTTCA
TTGTCGCATGATTGAAGAGAAAGTTTGATTCCTACTCATGAAGCAGGTTT
CCAACATGTCGAAGTTGAAATCTGTGTATTATGCAACCAACCAAAGCTGA
GTTGGCAAACATTGTACTAATATTAGTATACAATGTAACTCAACATTTCC
TATACAAAGACTGATGGATCAGGAATGATTACAAAATGTGATCGGTTATT
GGGTATTGGTTTGATTTTTCTCCTCCTTCTTCACTCACTTAGTCCTTAGC
CAAAAATGATACACAATACGATCTAGCTTTTTTGTCCATCCTTTCTGTTT
GAAGTCTTAATAAAAATGATCTTTAAAGATTAAGTTGCCTAATTACCACA
TTCCTTCCGCCCCCATAAAAGCACTGGATGTACATGACTTGTACATAATT
CCTTGACAAAGCCTATTCAATACAAAAGTGGGTCACCTTTCTTGCACAGA
ATTACATTTGTGTCCTCCTTTTCTTTGTTCCATACAAAAGTATATATATA
TATATTTCAATTACTTGGTCATTCTCCTTCATTCTCTTTTCATGTTTGCA
AACAGAAGGGCACTTGTGGAGACAGATAGCTGAAATACAAACTACTTTCA
TTCAACACTTTGGCAAATGGATATGAGTCTGTATCAATCCC Coding sequence (CDS) from alignment at Sc0000236:187281..195471+ >BlTCONS00114492 ID=BlTCONS00114492|Name=BlTCONS00114492|organism=Branchiostoma lanceolatum|type=CDS|length=570bp|location=Sequence derived from alignment at Sc0000236:187281..195471+ (Branchiostoma lanceolatum)
ATGAGTCGGCCTGCCAGGAGACCAATCAGGTTCAGCGATTTCCCGCAGAA
ATCGGCCGAGGAACTGCGAGTGTTAGAGAGACGTTTTGTTCTGGACTGCG
TGGCTGTGGCCAACATCTCACAGGACTATGGGAAGGCCAATCCGAAGATG
GGGACAGCCATCCCACCCTACAACGCACAGAAGGACAAACATGTGGAGCC
TTACTTCAACTTTTATGGAGTGAAAGAGGTGTTGAAGACTACAGGACAGA
ATGGAAATAAGAGTTCCTCGATCGATGGTCCCGTCATCGACCGTTTTGTC
AGTCTGGGTAAAGGCTATCAGTACCTGTCCAAGAGGAACAAGTTTGGAGC
TGGGCACTCCAGAGAAGGGGCTGATGGTCATGGTCAGTTCATGACAGGCG
TGCAGCCCATGTTCGGCTACCGTGGCCTGTACGGATTCAGAAGGAACACG
CCCTGGCTGCGAAACGTTCCCTCGACATTTGGAGTCGACCCTCGGTCACC
AATGCACGCCAAAGAGCGACTTCCACCCATTTACTACCGACGTCAGGCAG
GCTGGGCAGCTAGCATATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00114492-exon-Sc0000236-1564993656:187281..187457 | BlTCONS00114492-exon-Sc0000236-1564993656:187281..187457 | Branchiostoma lanceolatum | exon |
| BlTCONS00114492-exon-Sc0000236-1564993656:187851..187949 | BlTCONS00114492-exon-Sc0000236-1564993656:187851..187949 | Branchiostoma lanceolatum | exon |
| BlTCONS00114492-exon-Sc0000236-1564993656:188260..188385 | BlTCONS00114492-exon-Sc0000236-1564993656:188260..188385 | Branchiostoma lanceolatum | exon |
| BlTCONS00114492-exon-Sc0000236-1564993656:190774..190950 | BlTCONS00114492-exon-Sc0000236-1564993656:190774..190950 | Branchiostoma lanceolatum | exon |
| BlTCONS00114492-exon-Sc0000236-1564993656:191450..191563 | BlTCONS00114492-exon-Sc0000236-1564993656:191450..191563 | Branchiostoma lanceolatum | exon |
| BlTCONS00114492-exon-Sc0000236-1564993656:192711..192813 | BlTCONS00114492-exon-Sc0000236-1564993656:192711..192813 | Branchiostoma lanceolatum | exon |
| BlTCONS00114492-exon-Sc0000236-1564993656:193315..195471 | BlTCONS00114492-exon-Sc0000236-1564993656:193315..195471 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000236 | genome | Sc0000236:187281..195471 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF056167 |
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