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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000235:433538..437869- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00114476 ID=BlTCONS00114476|Name=BlTCONS00114476|organism=Branchiostoma lanceolatum|type=mRNA|length=4332bp|location=Sequence derived from alignment at Sc0000235:433538..437869- (Branchiostoma lanceolatum)
CAGGGCGTACTTTGTTAGAACTACTGGCAATGAATGTTGAATCACCACAA
GGGTCTATTTTCTGTGATTTTGTACTAAATCTTAGTTATTTCATTTTCCA
TGATAGTCATGTCAGTCGATGTCAACAGCTGTGCCAGCATAACAATGTAA
AATACAGTGTAAATGTTTCTGATTGTTGATTGGTCTGTTACTTAGTTTGT
TTGTTAATTTCATTTTTCCTCCCATGCAGAGGTCGACATCATCGCCAACA
TCCAGGCGACCTCCCCCTGCGTCCACCCCTTCCACATCCAGGAGGGGATG
CGCATGCTCCTGGAGGACAGCTTCGACTCCGTCTTCACCATCTCTAAGAA
ACACGGCTTCATCTGGAAGGAGCCTCCACAGAAGGGTGCGTAACCAGGCC
GTCCTGCGTGGGTTATTTATCAATAGTCTGATAAGTCAGCCCTTTAGATT
TGACCTCGGAAGAAAAAAAGACAATGTACATGTACAGAGTTGACCTTTGA
CGAGCTCGAGGACATGCCCTATGGCAAGGCTACCGAACGTGTTTACAAAT
ATAGTTTCCATACCGGTTTTGACCAATGAAGAATGGCGTGTTCAATTCGT
AGAAATTATTACGTTAGTCAAATATGAAAATTACCTATATTTAACCAGAC
AGTGAAAGGCAAGTCATTCAGAAAGAAAATAAAGTAGATGGGAGGGGTGT
ATTTTTTTTACAAATGTGATAACTTCTTCGTCCAACCTTCAGATATGCAG
CCAATCAACATTAACCTTGATCTGATGAACCGCCCCCGTCGCCAAGACTA
CGACCCTGAACCTGTGGAGAACGGCGCGTTCTACATGTACACCCGCGATA
TACACGCGCAGGGGAAAACTCAGGTAAACAGACGTTCTTTCAACAAAGTA
TTTGTCCTTTCTGTCATGACTTGTATGTGGTGACTTCTCTTGGCTGTTAA
AACATCTTTTGAGCATTTTCATATCATGACCTGTATGGCTACCAATCATT
ATCGTATCAACTTTTTAGAAGTACTGTTTGTTGGAGAACTGATATTTGAA
GGTCTGTTTGGTGAACAACTAATATTCTGTCTGTGAGGTTTTCAACAGAA
TAGAATTGTAAGAAGCTATGTTGACTACCAAACAAAATTGAGAAATTTGT
TTGCTGCCTTCCAGGGCGGTAGAATAGCGTGGTTAGAGATGGGAGGGGAG
TACAGTGTGGACATCTACACCGATCTGGACTGGGACATCGCAGAGGAACG
TCTACTGCGGTTTGGGTACCACGGCAAACACCCAAAGGTATGGCTCATCC
CAGTCAGTTTACTACTGTATCTAATTCTGATCTGAGGTAAGGATATGTGA
AGTAATGTATGCTGCATTGTATTGCATTGCTAAAATAACTAGATTATTAC
ATTTTAAAATCATTCCAACGGTGTCATTTACTCAGAATTCTCTTTTTCTT
CCATGTAAACAATACAAAGTTGGTGCCGTACGACATTTATATCGACTTTA
ATACTATTAAGTATAGCTAGAGCCAACTTGAAGGACATGAAATAGAAATA
ACTTTTTTTTCAACATTCTAATGAAGCAATGTTGATGACAACCATCTGAA
GCATAGTTTCTTGACAAAACACATTAAATGAATGAAAGACCTTTATCGTA
CATCTATCCTTAAACAAGCTAAGTACAGAATCAGTAGCTTTGTTGTTGTG
TTCCTGTCAGATCGTGAAGCTGGTGGTGATAGCGGCGGACGGCGTGCTGC
TGGACAACCACGTGGAGATGAACGCGCGCGGAGAGGAGCTCATGTCCTAC
CATCTTAGCGACGTCAACGCCATCAAACACATGCAGAACAACCTGGTGGA
GGTAATATCTCAAACCAACGCTTGGAAAACAACTGTCCCCCCTCCAAAAG
TCCCAGGGATCTGCCTCCAGCTGTCTAGTGAAATAGATGCCATGCTTCTA
GATGTACAGTGTATTTTTCTTTAAAGCAGATGAATCAAACCTGACTGATA
AAGGTCAATCTGATGACACTTATGGGTGTTGAATGCCTACTGCAGCTCGG
AAAAACTGACATTGAACGTTTTATGGATCTACGAATTTTCTCTTGGGCTG
TTCCTCAACAGCTGAATATCAAATGGGCTAACAACCCTCCCCTCTCCCTC
ATTTACCTTCGTCATCATCCATTCTTCCCTTCAGTTTTCCGCAGAGAAAC
GCCTTCAAATTGTGATAGCTGACAGATAATGTCATATGTGAATAAATAAG
ATACCCTGCCTCAAACAAACGTGGAGATTCCTCCAGTTGTGTCATGACGT
CTCTAAGAATCCCACCCTCTCCATCCTCAGGTCCGCATTATCGCCGAAGG
TGAGAACGTAGTGCAGAGACGTCTGGCCGCCTCTCTGGGCTGTAAGATTC
ATGAGAACTCCAAGGTAAGTTCTATATAATTTCTTTGTCTGTTTCTATGA
TACGTTATACAACATGAACCGCCATCATTTTAAAATACACGGCTCAACAT
TTCTTGGAAGAAGTCGTCAAGACGATATACGTTGTGGATCTTCCTGGATT
TCTATGTTATTATGATAAAAGAATAGCCGGATCTACATTAAAATGGTTGT
TTTGTATCCCATCCAGAACAAGCTCCAAGTGTTGAACCAATGGCGGGAGG
AACTGGGACTGACATGGAGGAATGTGGGATATATGGGTAAGTAGTGTCAA
TTATTTTATCTAGAAACAAATTCCTACATACTTTGATGGTGAAATATTTC
AAAGACTGGAAGTGTAGCTATTAGATAAAAAATGCGTCTGTAGATTTAAC
ATTAAGCCAATCGATGCTATAGGAATATCGATATTCTTGAGAAAGATTAC
ATCTATTTCCTCCTCTGTATTTCTACCCCAGGGAGTGAAAACACGGACAC
CCAGTGCGTGAAGGCGGCGGGCATGAGCGCCTGTCCCGCCGACGCGCACG
ACGACGTCCAGCTGGTGTCGCACTTCATCTCCAAGTACAAGGGCGGGCAG
GGCGGACTCAGGGAGTTCAGCGAACAGGTACGGCTAGTTGGAGCGATTCT
TGTCTTGTGTAAATATAGGGCCTGGTCATATCAGTCGTACAATCGCAAGC
AAGATTGGGGGGGTTCTTAGGATAGTCGTTCATGTGTAGTTCCATAAAAA
AACAAGTTCTGTTACCAAAAAAGGCTGTCGGCGGTTGGTTCTGTCACAGC
CTGCATGAAACGACCTACTACAAATGTGACCGCACCGGTAGAAGGAAACA
TTGGAACGTTACAAGTCTAAAAGACACGATCCATTCGGGCGAATGACCGG
TTCGTTTTCTGCAAGAAATATTATCTTTTATCAAGGAATGAGGTCCTTTA
GCTTTCGTTTGTTTGGATGCTGTTTTGTAGTCAAGGTATCAGCTGCTTTT
CCTTTCCATGAAATACTTTGCTTATCTTTTTCCAGGTGCTGAAAGTGAAT
AAGATGAGCACCTACAAGGAGAGAGTGGACAAGACAACAGTCTATGCCAA
GTAGACAGCATCGTTAACGTGCCTTAAAAGATGCTTTGACATATTCTTAT
TAGCATGGACTAGTCACTTTTGGTGTAAGTTAGTGAATTGGTTGAGCCTC
TGTTTTCTTCAACACACGTGTGGCCACAGCGTAAAAGTATTATGGTAAAT
TTCCTATCATTAGTTGAGCTTTGCTGTACCTAGACTTTAAAAAACACACA
GCGCAAATCTAGGGTGCAATATTGATACAAAGTTGTATCTCTGGAGATGA
ATTCTATCAGGTTGGAAATAATGTTGTTGCAATATGATGACAGCAAAACG
TGTTAATAGTTGGTGCAATCGTACCGTTATGATCGATCGATAACAGAATA
ATCGGAAAATTGGGAATAGCCAAAGGGAGTACAGAGCTCTATATAGCTAT
ATTGGGGACTTTAAAAAGTATAGGTAATACATATAACAGGAGACGCCATG
AATTTGAAATGTCTACCACAACATTTGAAAATAGCAATTGTCCAGAAACA
ATGTACTTAGAGAATAATACTTCGTTTTGCTGTTTCTTTTGAATATACAG
TAAACATATAACAGTTATCATAGTTAGCAAGGTGATTTGATTGAAGAGTG
GTTGAATACACGTTTATTTTCAACTGTTGATAAGTAGTCTCTGGTTTGCT
TGGGTATATAACGTTTGATATAAAACTATAGCATTATCATGAGTTGCTTC
AGATAAAGTATATTTCACAATTATGTTTCGACATCTGCCGGGTTAAAAAA
AATAGAAGTTGTGACCATCATATTCCCGTTGTCTTTACTGTAGCGTTGCA
TTATTCTTGGTTTCCAACCGTAATAACACAAG Coding sequence (CDS) from alignment at Sc0000235:433538..437869- >BlTCONS00114476 ID=BlTCONS00114476|Name=BlTCONS00114476|organism=Branchiostoma lanceolatum|type=CDS|length=852bp|location=Sequence derived from alignment at Sc0000235:433538..437869- (Branchiostoma lanceolatum)
ATGCGCATGCTCCTGGAGGACAGCTTCGACTCCGTCTTCACCATCTCTAA
GAAACACGGCTTCATCTGGAAGGAGCCTCCACAGAAGGATATGCAGCCAA
TCAACATTAACCTTGATCTGATGAACCGCCCCCGTCGCCAAGACTACGAC
CCTGAACCTGTGGAGAACGGCGCGTTCTACATGTACACCCGCGATATACA
CGCGCAGGGGAAAACTCAGGGCGGTAGAATAGCGTGGTTAGAGATGGGAG
GGGAGTACAGTGTGGACATCTACACCGATCTGGACTGGGACATCGCAGAG
GAACGTCTACTGCGGTTTGGGTACCACGGCAAACACCCAAAGATCGTGAA
GCTGGTGGTGATAGCGGCGGACGGCGTGCTGCTGGACAACCACGTGGAGA
TGAACGCGCGCGGAGAGGAGCTCATGTCCTACCATCTTAGCGACGTCAAC
GCCATCAAACACATGCAGAACAACCTGGTGGAGGTCCGCATTATCGCCGA
AGGTGAGAACGTAGTGCAGAGACGTCTGGCCGCCTCTCTGGGCTGTAAGA
TTCATGAGAACTCCAAGAACAAGCTCCAAGTGTTGAACCAATGGCGGGAG
GAACTGGGACTGACATGGAGGAATGTGGGATATATGGGGAGTGAAAACAC
GGACACCCAGTGCGTGAAGGCGGCGGGCATGAGCGCCTGTCCCGCCGACG
CGCACGACGACGTCCAGCTGGTGTCGCACTTCATCTCCAAGTACAAGGGC
GGGCAGGGCGGACTCAGGGAGTTCAGCGAACAGGTGCTGAAAGTGAATAA
GATGAGCACCTACAAGGAGAGAGTGGACAAGACAACAGTCTATGCCAAGT
AG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00114476-exon-Sc0000235-1564993656:437807..437869 | BlTCONS00114476-exon-Sc0000235-1564993656:437807..437869 | Branchiostoma lanceolatum | exon |
| BlTCONS00114476-exon-Sc0000235-1564993656:437485..437640 | BlTCONS00114476-exon-Sc0000235-1564993656:437485..437640 | Branchiostoma lanceolatum | exon |
| BlTCONS00114476-exon-Sc0000235-1564993656:436997..437127 | BlTCONS00114476-exon-Sc0000235-1564993656:436997..437127 | Branchiostoma lanceolatum | exon |
| BlTCONS00114476-exon-Sc0000235-1564993656:436583..436705 | BlTCONS00114476-exon-Sc0000235-1564993656:436583..436705 | Branchiostoma lanceolatum | exon |
| BlTCONS00114476-exon-Sc0000235-1564993656:436019..436159 | BlTCONS00114476-exon-Sc0000235-1564993656:436019..436159 | Branchiostoma lanceolatum | exon |
| BlTCONS00114476-exon-Sc0000235-1564993656:435456..435539 | BlTCONS00114476-exon-Sc0000235-1564993656:435456..435539 | Branchiostoma lanceolatum | exon |
| BlTCONS00114476-exon-Sc0000235-1564993656:435184..435253 | BlTCONS00114476-exon-Sc0000235-1564993656:435184..435253 | Branchiostoma lanceolatum | exon |
| BlTCONS00114476-exon-Sc0000235-1564993656:434843..434988 | BlTCONS00114476-exon-Sc0000235-1564993656:434843..434988 | Branchiostoma lanceolatum | exon |
| BlTCONS00114476-exon-Sc0000235-1564993656:433538..434434 | BlTCONS00114476-exon-Sc0000235-1564993656:433538..434434 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000235 | genome | Sc0000235:433538..437869 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF056157 |
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