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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000235:224998..230864+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00114397 ID=BlTCONS00114397|Name=BlTCONS00114397|organism=Branchiostoma lanceolatum|type=mRNA|length=5867bp|location=Sequence derived from alignment at Sc0000235:224998..230864+ (Branchiostoma lanceolatum)
CTTGTCTGTATCGTGTCCACGGGATATATGCGCTAAAGGTTTGCTTTTCT
GGTACCTTTCCGGGTTCGTTGAATTGTACAGTACAATGCAGAACCAGGAG
ATTGAGTCGAGAAACGTTACGTTTCTACATCGGCTTGGAGATGAGTACGC
GTACATTTTTTTATGTCGGTAACAGTATTTGAACACGTTAGGAAGTGATG
ATGGCTTTTTTAAATATATAGCTCTTTTCTTTATTGTTCGTTAGAGGGGC
AGTTGGAGATTATAACTCTTCATAACTCTCTTTATACATTCTCGTTTTGG
ATGGGAGTCAAGTAGACTTGCAATCCCAACATTTATCACCAGATGTCACT
GTTAGAGACCTCCCACAATGCACCTGGAAAAAATTCGCGCCACTTTTTAT
TTTGGGCAAAGTGAAGGGCCGAGACAGACGTCAACTCTGCAATCTCCTTG
TAAAACTGTTTTCCTCACTTCACTTTGTTAAATTCACATAAGTTTCTTCA
GAATGGCACCCAAGCGCGCAGCTGTGGATGCTGAGCAGCAGACGGCGGGC
AAAGGTACGTGCAAAATCTTCCCGGTGCTTTATGATATGAGAGTCAAGGA
CATAATTTCCTTGATAGTGTACAGTTGGGTAGCGTAGAGTAAAGTTTACA
GGTGGGATGTTCTTCCAGTTTAGACCGCTCCACATCCGTCTCCCATCCGT
CTCTTCTTTAACCTGTCACAGTGAGTGGGTCTTCTAGTATATGTGGATGG
TCCAAATGTTCTCTAACGTTATATATTCCAGAATCCCAGTGAAACTAAAG
TTGCACGTATAGGAACGTTATACTCAAGGACCTTCTTGATTGAAGTTGAT
ATACTTTATAATCATAGCAGTTCTTGTACATATAAGCTCTTGAATGGGTA
AATTATGTCTCAAGATACATAAATTGTTAAAGTTTCCTTCCTTCAAGTTA
TAGGGAAAGAAAAGTTGTTATCTTCAGTTTTCATCACAACCTTCCGTCGA
TTAGAATTATGAGCGCGATCTCAGCGCCTGAACAGTGAATATCTGGTTTC
ATTCGGAGGATCGATACAGGACAAAATCACACTAATATTGTTGCATTTGC
TGCCTATATATCGTGAATGGCGGGAAAATCATTTGCTCATTCTGCATGTA
TATATCCGTGAATGTATATAGCTAATATATATTACCAGATGTAGATATGA
GTACACACTACATTAATCATTATGTTCTGTCTGGTATGTAAAAACAGAGG
TGTGAAATGACCTGTCTGGCTTGTGCTGTATGCCATTGTGTTCTATTGTG
TTTTATTGATTGAAGACCTTTATTGTATGTTCGTGCCCCGAGGGGCTAGA
TACAGGTCGTTTAACACAAACCAAACTAACATCTAAGTGACATATACAGT
GAAATATGTACAGTACATTGTGTAAACATACATGGTAGAAGAAAAGGATA
AGCTAAGCTAATCTAGTAAAGTCAACTTCTTCTCGCTTCTTTGTACATGT
GTAGATGTATGAACAGATCATGTTTCTTATACAAGGGTTATCTAGACGCA
ACAAAAATATGAATTTATCCGTTGCGTTTAAATATTTTGTCTACTATCTG
ATAGACGGCAGTCTGTTATGGAAAGTTGGAAGTGTGAAATGCTCACAGTT
GAATTCAGGAGGCTAAAGATATGAATAGTTGAATACACATTGTCTTCTGT
CTGGTTTGGCCAGAGCTGAAGTATGAAATAACCTGTGAGAGAGTGCGAAT
AAAAAAAAAGTTTGGCAAAAAAAAAGTTGCCTTCCTTATGAAAAGTAAGT
TGACAGGAAGGGTGAACAAATGGCAAAACACACAGAGTATGGTATACCAC
GAATTATATCTTCTCAGACTTTGGACTTGACTTTGGCATTCTATGCCATT
AAAATCTGTTTTCAGACACATTTTCAGATTTTGTTGCAATTTACGGTGTA
TATTTGCACATTTTGTACCTGTTTAGTGTTTTGTACGATTTATAATCTGG
TCGAAAACTTTTTTTGTGGAAACAGACAAAAATTGATGCGCACACGGATG
CCATCCATACAATCAAATCAACATAGCCATATCTAAAAAAAGAAAAGACA
AAAAGAAACTGCTGAAAGAGAATGGCACAGTCTTAGTTAAATACTTAGGT
AATCAAGGAGATGTAATTCAATGATACACTAAGAAAAGTTCTGTTTGTTT
CCGCTTTCAGCCCCTGCCAAGCCAAAGCCCAAGAGGAAGAAGCCCAGCCC
TCCCAAGGCCCCAAAGTGTGGCTGCAAGGGGGACTGCAGGTCAAGGTGAT
AATCATTACATCAACCCCTTGGAATTTCTGCACTATAGTAATACATGTAG
TTATAAACATTGAAATCTATTTCACATGGAGTAGATAGGTCAGTCATTTT
GCCCCCAAGGTGATTATCATGGAGGCCTACTTGCTTGCAGCTTGATATCT
GCTTGAAAACATGTTTGTAAAAGTACAGGTCATGCAATATTCAAATTGTT
AAAAGTGCAATGTTCATAAACTCAATGTTGATCCCCATGTTTCTCAGCTG
TAAAAGTTGTATGTAGTGTATGTAGAGTTGTTTTCTACTCCAAGGAAACA
GGCAAGTCTAAATAAAAGTCAGCATAGCCTTTGTCTTTAAAAGATAAAAG
TCAGCATAGCCTTCTTCTTTAAAAGATGGAACACATAATTCATTTTTCTC
TTGTTTGTTATTATTGCAGGAAATGTGGCTGTGGAAAGAAGGGCGAGGCC
TGTGGGGACTCCTGCAAGTGTGCTGGCTGCAAAAACCCCTTCAAGATCCT
CAAGGAGTATAACATTGACTGTGTGGCAGCAGCCCAGGACAAATGTCTCA
TGGACAACATCTTCAAGGTACAACAGTGCAACATGTCACTTGTACAGGCA
GTTCAGTAGCACCTTATATTAAGAAAACAAATTACACATAACACACATAA
AATTTGAAGTGTAGACACCATTGATGTTATGACAAGCCATCTTACACTGT
TTTTGTACCCTTGTGCAGATTGAAGATCTGAGAGGCCGATTGGAGCACAG
ACTGAGAACAGAATGCTGTGGGAGGGCAGTACGGGTGTGTTGAACAGTTC
ATATATGTCTGGTCTATGTGCCACAGTAAGAATTTATGGCCTCAGTATAA
AACTTATACTACTGTAAATCACTTAAATATAGCGGCAGGAAAATATAGCG
GTTTGGGGGAAATGGAGTAGGTCACGGCACTTAATTTTAACGGTTTGAAC
AAACATTACTGTCTCAAATACTAGTAATCAAATATTTGTGATGATGAAAT
TTTAGCGGTTGAAAAGTGACCGTTACATCAGCTAAAATTAAGTTACAGTT
AACAAATCAAGAATTAAATGCTTCTTTTTTTAGCTACCGTTTTTGTTCTT
CAACTGTAGAGACAAAGGTTTGTGACTTGAGCTGTACTTCTGTATCTCCA
CCTCCAGCTGAAGAACATGTTGCCTGGCACCATCACCCAGTGCAACTGTC
CTGATTGTGGGCACGAGTGGCAGTACTCCTGGTGCAGTCATGAGCTTGTT
GATTGGGAGACTCGCCCTCGCAACCACTGTGGCATCTGTCGCAGGTGTGG
GGACTACAGGGATGCTCATTGTCAGGTAACCAAGTGTTGTGTGTTTCTAA
TCTATCAGTGTCAATGTTCTCTTGCTCTACTATGCACTATATATGATAGT
TCTTGATTTAGTTCTTGTCTTACATACTCCTCATTTATGTTCATAATCTT
GCTTGAGATTATGGTAACAGCTAACACATGATTGTGGATAGCAGCATTGA
ATGGGCCATGCATTATTACTGCTACAGAATTCTAAAGCTGCATGATTTGC
TCGGCTCATAAGATTAACAATACATCTATTGCAATAGCTAGTCTTAGCAT
CCCTGTTTTCTCCAAACAGAAATGCAACAAGTGCTACTTTGCCGGCATGT
CTGGTTTCGAGTGCCCATGCCAGGATCGGCGACCAAATCCAGAGGGAGAC
CTGGGCTCAATGGGCATCTTCATGAAGTGGGCCATGCAGTACCTTGCTGG
GGACGACAGCGACGGGCTCAGTGATGATTCGGAAGACGAAGGCTTCATCT
AAAACAGCCCTGTGAGATGAAACAAATGTGCAGACACTTGCCAGACAGCA
CTGCTAAGGTTGTTTGCTATGTGCCAAAGTTGATATTTTACTGTATTGCT
TGATTGGCCATCAGTTTTTACATACATTGTACATGTAAAATAGTGTTCGT
GTATTACTGCAACAAGACTGATACACTCTTTCAAACCTGGAAGAAGTTGT
TTTCTTTTATAGAAGGCATTGGTTTGAGTTGAAGAGTTGAGACATTTAGG
AAAAGCTAACAGCCAGCCAAAGTTGTGAAAAATGATATAGCTATACCTTA
CCTATGTTTTGTTCAGTTAACCAATACTTGTTTAAATAGGAAATACATTA
CTTGTTCATGTCCTGAACTTCAGGCTCTATTAAGAACACACATTATGTTC
ATATTGTTAATAGCCAAGGTTTCCCCACGTAAGCCATATATTTAATACAG
TACAGACAAGTTTTGATTAAGTCTAGTTTATTGGTTTGTTTCATATTCTA
AAAAGTTGTGTTGTATATGAGTTATCCATTATTCTTATGCCATATATAAG
AAGTCAGTTCACAATGAATCAGTTCTAACATAGATCAGTTAAAGATGTTT
TTGTTGTTCGCTACTAGGGCTGTTCAGTCCTACACAGTCTACATTTATGT
TTATGTTTATATTGTTTGACATTGAAATGTCATGGTCTACAACAAATCTG
CTCTTGTCAATTTGCAAACATCTTATTATAGCTTGCATTACAAATTCTAC
CAATTTTCTTATTCATCTTTTACTGGACAATCATCCCAAGCTGTTTAGGC
AACAATATTGCTTATATAGCTTGGGATGATATAACTTAGTAATATAAGTA
AATACCAGTAGTAGGTACCTTGATTCAAAATACTTACTAGTAGTACAGTT
CATCTCACATTAAAGGACAGTCCTCTAACCTGACCGGTTGCTGGATGATA
GTACAATACTGGGACATTACAGTAACTTACACTTCTCTTAAGTAAAGCAA
AACATGTTTCTACCCTTGCACATGTAGATTTACCATAAATATGATAGTTA
CAGTATGGTGAAATATCAGGAAGGAACAAGGTCTGTCAGGAATGTATTCT
TTATCTTACTTGGAGCAATTGATGGTAGGCAGTATTGATTTCCAATCACT
CTGCCATGTTACATAATTTTACTTCCAATCAATGTCACCTATCCGTGAAG
TTTAACATTGAACAGTCTGAGATCGTGTGAGATGTTTAATGTTAAGCACT
AAACAAATGCTGACATCACTGGTACAAGTAATCATTGACAAAAGTACAAC
CAATCAGGTGAGAGAAGTGTGCCTTTAAAGCTCATCTAGTCATCTCTTCC
CCCCTGAGGAAGTCTCTGTGGGTTTGATGAAAACTCCCTCCATCACTCTC
CAGAAGTTGCCACTATCAGGCTTGGGGTATGCGCAGACTTCCCTCTGTCC
GTGGATGGGCCGGCCGTAGGTGTCTCCTGTGATGTGGAGGTACATTTCGG
TGACAGTGTGCTTGAACCTGACCATGTCGTCTCGCTCCCAGTATGTCCCG
CTGCAGGTCACCGCCCAGTAGTCGCCGGTGTCTCCAAGGCCATCAGTTCC
AAATGCACTCACCTGATGATGATAAGATTATTCATCAATCAACAACATTA
CTTTTTCTTCATCATTATATGCACCACAGTATAGATACAAACATAAGTCA
CAATTCATTTCCTTGGTTCTCTGGTGTAACAATTTAGCAAGACATGAAAA
GGGGCTGGGAGGAAAAC Coding sequence (CDS) from alignment at Sc0000235:224998..230864+ >BlTCONS00114397 ID=BlTCONS00114397|Name=BlTCONS00114397|organism=Branchiostoma lanceolatum|type=CDS|length=702bp|location=Sequence derived from alignment at Sc0000235:224998..230864+ (Branchiostoma lanceolatum)
ATGGCACCCAAGCGCGCAGCTGTGGATGCTGAGCAGCAGACGGCGGGCAA
AGCCCCTGCCAAGCCAAAGCCCAAGAGGAAGAAGCCCAGCCCTCCCAAGG
CCCCAAAGTGTGGCTGCAAGGGGGACTGCAGGTCAAGGAAATGTGGCTGT
GGAAAGAAGGGCGAGGCCTGTGGGGACTCCTGCAAGTGTGCTGGCTGCAA
AAACCCCTTCAAGATCCTCAAGGAGTATAACATTGACTGTGTGGCAGCAG
CCCAGGACAAATGTCTCATGGACAACATCTTCAAGATTGAAGATCTGAGA
GGCCGATTGGAGCACAGACTGAGAACAGAATGCTGTGGGAGGGCAGTACG
GCTGAAGAACATGTTGCCTGGCACCATCACCCAGTGCAACTGTCCTGATT
GTGGGCACGAGTGGCAGTACTCCTGGTGCAGTCATGAGCTTGTTGATTGG
GAGACTCGCCCTCGCAACCACTGTGGCATCTGTCGCAGGTGTGGGGACTA
CAGGGATGCTCATTGTCAGAAATGCAACAAGTGCTACTTTGCCGGCATGT
CTGGTTTCGAGTGCCCATGCCAGGATCGGCGACCAAATCCAGAGGGAGAC
CTGGGCTCAATGGGCATCTTCATGAAGTGGGCCATGCAGTACCTTGCTGG
GGACGACAGCGACGGGCTCAGTGATGATTCGGAAGACGAAGGCTTCATCT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00114397-exon-Sc0000235-1564993656:224998..225551 | BlTCONS00114397-exon-Sc0000235-1564993656:224998..225551 | Branchiostoma lanceolatum | exon |
| BlTCONS00114397-exon-Sc0000235-1564993656:227208..227292 | BlTCONS00114397-exon-Sc0000235-1564993656:227208..227292 | Branchiostoma lanceolatum | exon |
| BlTCONS00114397-exon-Sc0000235-1564993656:227717..227864 | BlTCONS00114397-exon-Sc0000235-1564993656:227717..227864 | Branchiostoma lanceolatum | exon |
| BlTCONS00114397-exon-Sc0000235-1564993656:228016..228081 | BlTCONS00114397-exon-Sc0000235-1564993656:228016..228081 | Branchiostoma lanceolatum | exon |
| BlTCONS00114397-exon-Sc0000235-1564993656:228455..228622 | BlTCONS00114397-exon-Sc0000235-1564993656:228455..228622 | Branchiostoma lanceolatum | exon |
| BlTCONS00114397-exon-Sc0000235-1564993656:228917..230864 | BlTCONS00114397-exon-Sc0000235-1564993656:228917..230864 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000235 | genome | Sc0000235:224998..230864 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF056116 |
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