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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000235:215013..221290+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00114395 ID=BlTCONS00114395|Name=BlTCONS00114395|organism=Branchiostoma lanceolatum|type=mRNA|length=6278bp|location=Sequence derived from alignment at Sc0000235:215013..221290+ (Branchiostoma lanceolatum)
GCTGCATCTGGGATGGGAATCCAGCAGACTTGCAATGTCCGCATTTATCG
CCAGATGTCGCTGTTAAAAGACCTCCCAGAATGCATCTGGACAAAGTTCG
CGCCATTTTTTATTTTGGACGAAGTGGCGGGACGAGGCAGACGTCAACTC
TGCAATCTTCTTGTAAAACTGTTTTCCTCAGTAAACATTTCAAACTCCCT
CGAGTTTCCTCAGAATGGCATCCAAGCGCGCAGCTGTGGATACAGAGCAG
CAGGCAGCGGGCAAAGGTACGCTACAAATCTCAGGAAGTTTCCGGGTGCA
TAAGGTACCCAAATTTTTGCTTGGAATTTTGGACGTGACCTAACGCGTCA
ACTTTCATAAATAGAACTTCCTTGCTTACACGTAACGTTATATTTCAGTT
GTAACTGTAGCTGTAGCTGATACTACAACGGCCATTTTACCACTGAAACT
GAAGTTGCACGAATGGCATACTTTGTAATCGTAGCAGTTCTTATTGAAGG
GGTAAAATTAACATAATATTGTCTCAAGATAAAGCTTCAAGTTCGAGGGA
AAGAAATTTTGTCATCTTCAGTTTTTATCACGACCTTCCGTCGATTGAAT
ACTACTAGTAGTAGTTTTGAACAAGAACCCAGAATTCACATGGTCAGTGA
ATGTCTGGTTTCATTCTGAGGAAAACAGTTATATACACCAGTTCTGTTGT
TTTTGCCGCCTAAATCGTGAATGGCGGGAAAGTTCTTTGCTGTCACTCAT
TCAATTCTACATGTCAATGGCTAATGTATACCAGATGTGGATTTGAGTAC
ACCACAGTGCTCTGTCTGGTATGCAAAAACAAACGTGTGAAATGAATGGC
CTGCCTGATTTGTGCTGTAAATGCCATTGTGCTCTATTGTCTACTGTCTG
GTGGTTTGTTTGTTTTTTTGTTTGTTATGGAAAGTTTTCAGTGTGAAATG
CTCACATTATATTTAATCCGATGTGTAAAACAAAAGAGCTTTGAGGGAAG
CTGAAGTAATACATGTAGTGTGAAATAACCCGTCTGATTTGTGCTGTGTG
CCATTGTTATCTATTGCCAGACCGAAGTTTGTAATGAAAAATTGAGGTGA
AATGAAGAGTGCCCCAAAACTGGAAACCTAAATTCCTACATGGCTGAAGT
TTCTACCCTACTCCACTCTACTGTTGAACCAGGAGACCGTACCCATAGCC
CTGCCCACCTCTGCCTAAACATAGAACTTTTATTAGGATAGAAAATAAGA
AATACAAAACTATATTATCGCACTAATGTGCAGTCAATCTCCTATTGGCT
GAACTGTTAATTCTAACGGACACATAAAGACAATATTGATATACATGGAC
ATGTATTGAAAGGTTGAGAAGAAAAATGGAATTGTAAAGAGTCAACACAA
ATGACGTAATTGTTAATTCCATGTATGCAATGATTATCTATGTACATTTA
TGAGAAATTAGACATTAAAAAGAATGGCACATAGTCTTAATCAAACACAT
GTAACAAAAGTTCTGTTTGTTTCCACTTTCAGCACCTGCCAAGCCAAAGG
CCAAGAAGAAGAAGCCCAGCCCTCCCAAGGCCCCAAAATGTGGCTGTAGA
GGGGACTGCAAGTCAAGGTGATAGTTAACCCCTTGGATATTCTTCAGTAT
AATACATATAGGACAGATATAGTAAGCCTTGTAACTTCGCAAGACTAACA
TTTTGCCCCACAATTTTAGGATTGGATGACAATCAATATCGTGGAGACCT
ACTATGTACTAGTATTTTTTAACCTCCTTGCTTGTGGCTTGATGTCTGCT
CTGTAACATGTGTGTACATGAAACAGGTCATGTAAAACATGGAATAATCA
ATTTTACAAGTGTGATGTTCATAATCTTAGGGCTGATCCCCTTATTTCTC
AGCTGTGAGAGACAGATATGCATCAAGTGTATGAGGAGTTGGCTTTTCTA
CTCACAGGTGTCAGTCTTGAGTCTGAATAAAAATAGCATAGCCCTTTTCT
GTAAAAGATGGAACTTTTAGATTCTCATCTTGTTCGTTATTGTTGCAGCA
AATGTGGCTGTGGAAAGAAGGGCGAGGCCTGTGGGGACTCCTGCAAGTGT
ACTGGCTGCAAAAACCCCTTCAAGATCCTCAAGGAGTATAACATTGACTG
TGTGGCAGCAGCCCAGGACAAATGTCTCATGGACAACATCTTCAAGGTAC
AACAGACTAACAGTGTAGCTTGTTAATGTACATGTTAAAATGTTGTGTTT
AAGGACACACAGCCAGTTCAGCAGCACCTTATATAAAGAAACGCAATTGA
CAATTACACATAACATTGTGTACTTCATTGATGTTATTTATAAGGGTTGT
ATTTCAAACCATCATACCCCATTTTCATACCCTTGTGCAGATTGAAGATC
TGAGAGGCCGCCTGGAGCAGAGTCATGAACTACAGTGCTGTGGGAGCGAG
GTACAGGTGCGTTGAACAGCTTATATAAGTGTCTGGTCTATGTGCTTCAG
TAAAGACTGTCTACGGCCTAAGTGAAAAACTATTAGATGGTTCTTTTTTC
TTAGCAATCGCTTCTGTAAACTGTCTAAACAGAGGTTTGTGACTAGCCTT
GAATTAAGTTGTACTCATGTTTGACTACCTCCAGCTGAAGGACATGTTCC
CTGGTGTTGCGACCTGTCCGGATGACGACTGTGGGGGTGAGTGGCAGTAC
TCCTGGTGCAGCAATGACTTTGTTGATGAGGAGAATCGTCCCAGGAACCA
TTGTGGCATCTGCCGCGGGTGTGGGGACTACAGGGATGCTCATTGTGAGG
TAACCAAGCAGTGGTAGAAATACTTTTTTTCAGTGTTCTGCAATATTGCA
GAATGTCAAAATTTTTTTCTGCAATTTGAAAATATTTTCTGCAAATACAC
ATGCCTCCATACTACAGCCTTCACAACTTAATAATGCCTACTTCAGGGCT
CGAAATACTGGGTGCATGTGCACCCAGTGCACCCAATTTTGGAGCTGTGC
ACCTAATTTCTTATGCACCCAAATATTTTTGTACGGTTTAATGTGTAAAG
GTATCACTGCACACTAGTAGACAGTATATTCTTGACATCTAAGTGTAAGA
AAATAATAAAATCTTTGTTGTAGTACTTGTTTAAGATTTTGATGGTAGAA
TTTGAGTTAAATTCGATTTTGAAAGCTTCAAAACTGCGTGCCGAGATCAC
GTGCCTTCACACGCATGAAGAGGAACAGTATAAATTAGGTTTGTCATTAG
GTTTTGCTTACAATAGTTACATTCTACTTTATTTTATGTGGTGCACCCAA
AATTTTTTTGGTGCACCCAATTTTTTAGGTTGGGTGCACCAGTGCACCTA
TTCCCAAAACTGAATTTCGAGCCCTGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAATTGTTTTCCCGACTT
TTGCCGACCCCGAGATCGTGACCGCGGAGATTAGCGAGGGTTGACGGAAA
TGCACGAATTTGACATTTTCTCACATGATTCGTCCCCGAAGTTATCACGG
AAAGTGTCGAAACCCCCCGAAAAAACTGACCTCAAGTGGCACCAGGCAGT
CGGAACGCACCGAAACGCCGCCATCTCGCGCCGCGCTGTGGGCTTCAGTT
TATTTACAGCGCCGCTAGTTTGCTTAGTACTAGTATTAAAGTCTAAATAA
TCTCCTGAATTGAGAGCCATTGAATCCCGAGTCTGATTTTTTTCTTATGC
AAAATTGCAGATTGTTTAATTTTTCTTCTGCAATCTTGAAAATCTTTATG
CAATTTGCAGATTGCAGACGGGTATTTCGAACGCTGTCAAGTGTTGTGTG
TTTCTAATCTAGCAGTGTCAATGTTCTCTTGCTCTACTATGTTGATATGA
TAGTTGTTGATTTAGTTCTTGTCTTCCATACTCCTCATTTATGTTTATAA
TCTTGCTTGAGATTATAGTTACAGCTAACATATGACTATAGATAACAGCA
TTGGATTGGCCATTTATTGTAACACGATTTCTACTATTATAGGATTCTTA
AGTTGCATGATTTACTTGGCTCATGATGCAATCTATTTTGATAGCTAGTC
TTGGCATCCCTGTTTTGAATAGACTTAACCAACCGGTCATCACTGTATTC
TCCAAACAGAGATGCAACAAGTGCTACTTTGCCGGCCTGTCTGGTTTCGA
GTGCCCCTGCAAGGATCGGCCCCCAAAGCCAAAGGGAGGCATGGGCTCTC
TGGGCATGATGTTGTGGGCCATGCAGCACTTCGCTGGGGACGACAGCGAC
AGGCTCAGTGATGAGTCGGACAACGGAGGCTTCTTCTAAAACAGCCCTGT
GAGATCAAACAACTGTGCAGACAGCACTGCTAAAATTGTTTGATCATGTT
TTCCCCTGAGATTGGCCTGCTAGGTGTATTTGTGCCTGTTTTACCACTAA
TGTATCCACTATAACCTGACATGTTCTATCATAAAAAGTCGGTTATCTAG
TGAGAAATGTGCCAAAGTTGATATTTTACTGTAATGCTTGATTGGCCTGC
AGTGGCTCATTAGTTTTAGTTTTTATATACATGTATGGCATGTAAAGAGT
GTATTCCTGCAACAGATACACTCTTCCATAAGGCATGGATTTGAGTTGAA
GATTTTAGACACACGAATCGATGATCATAAAGGAAAAGCTAACAGCCAGC
CAAAGTTGTGGAAAAGGATACAGCTATTATATTTTTATATAAACCTATTT
GGTAAGTTTTGTTCAGTTCACTGTTACTTGTTTAAATGGGAAACAAAGAA
CTTGTTCATGTCCTGAACATCAGGATCTTTTAAGAACACAAATATTATGT
TTATTTTGTTAATAGCAGAGGATTTCCCATGTAAGCCTGATATTTAATGC
AGGACACACAAACAAGTTATCATTAACACTAGTTTATTGGTTTGTTTCAT
GTTTTAAAAAGTTGTGTTAACCCAAGCATACGGGCTATCCATTCTTCTTA
TGCCATGTATGTTTACAACGATTCAGTTCTAATATAGATCCCTTACAGAT
GTTTTGTTGGTGTTAACTCTACTAGGGCTGCACATTACTACAAAATCCTA
CATACATTTATGTTTACATTGTTTGACATTAAAATGTCATGGCCGGGATA
ATGGCCCACAACAAACCTGCTCTTGTCAATTCCTGCCAAACCTTCACCAC
TTATTCCTTATATCAAAAGCTATCTACCACTCAAAAATAGCATGTCCAGG
ATAAAAGATCCAAAAGCTGGAAGTTCTGCCGCAGTACCAAGGTCACACAC
TAAGGGGCCCAAAATGGACCTTGCCCTTCATCTTACCAAGGCTTACCCAC
ATACCAAAAATCATTAAAATCCTTTGAGAGGTTCTTAAGTTATGCCAAAT
TTGGGCTCATTTGAAAGGTCTTTTGATCAGAACATGTAATCTGAAAACCG
ACTTCACATATCGTGCGCTATTTGTCTTAGCTCTTAAGATCTTTAAAGAC
ACTTATCTTCTAAACAAAGCACGATGTAATCGGTTTTCAGATTACATGTT
CTGATCAAAAGACCTTTCAAATGAGCCCAAGTTTGGCATATTCAGAAACC
GGGTTACGGCTATTTTGAAGTTAGGGTTAGCTCTTACTGTTACATGTGCT
ATTAGCCCTCAGGAAATACCACGCAAATAAAATTACAATGTACATGTATC
ATTATACAAGTTTTATTGATCCCCACACGTTTGATGATTTATCAGGTGAC
TTCATTAGTATCTTTTGTTTTACAATCAGACTAATGTAGAGAGTTGTCCT
CTGGATGATACACTTTGTGTTCTACTCCCACATCAACTGATAAGGATAAT
TACGATCTGGAGTTTGCTTTTAAACCCGGAATTTCCATTCTTTACTTACC
GCTTATGCATCCTGGGATGATTGTCCAGTTTATAGATGTCACACCAGTAA
AATGGTGCAAATTCTTTTTAGTACATGTTTGTATTTGTACTTTTCGTGAA
AAGCTACGTCATTGTAATAAATTTAGTAAATCATGTCTCTTTTTACACAA
GTTACTGATCACACCATTTATTTGGTCTTGATTGATAAATAAACTTGTTT
GTGAACAAGAAATGACCAGAGAAATAACATGTCTGTACCAATGAAATTTT
ATTGACAGATATCTCAACTGTAATGTCG Coding sequence (CDS) from alignment at Sc0000235:215013..221290+ >BlTCONS00114395 ID=BlTCONS00114395|Name=BlTCONS00114395|organism=Branchiostoma lanceolatum|type=CDS|length=696bp|location=Sequence derived from alignment at Sc0000235:215013..221290+ (Branchiostoma lanceolatum)
ATGGCATCCAAGCGCGCAGCTGTGGATACAGAGCAGCAGGCAGCGGGCAA
AGCACCTGCCAAGCCAAAGGCCAAGAAGAAGAAGCCCAGCCCTCCCAAGG
CCCCAAAATGTGGCTGTAGAGGGGACTGCAAGTCAAGCAAATGTGGCTGT
GGAAAGAAGGGCGAGGCCTGTGGGGACTCCTGCAAGTGTACTGGCTGCAA
AAACCCCTTCAAGATCCTCAAGGAGTATAACATTGACTGTGTGGCAGCAG
CCCAGGACAAATGTCTCATGGACAACATCTTCAAGATTGAAGATCTGAGA
GGCCGCCTGGAGCAGAGTCATGAACTACAGTGCTGTGGGAGCGAGGTACA
GCTGAAGGACATGTTCCCTGGTGTTGCGACCTGTCCGGATGACGACTGTG
GGGGTGAGTGGCAGTACTCCTGGTGCAGCAATGACTTTGTTGATGAGGAG
AATCGTCCCAGGAACCATTGTGGCATCTGCCGCGGGTGTGGGGACTACAG
GGATGCTCATTGTGAGAGATGCAACAAGTGCTACTTTGCCGGCCTGTCTG
GTTTCGAGTGCCCCTGCAAGGATCGGCCCCCAAAGCCAAAGGGAGGCATG
GGCTCTCTGGGCATGATGTTGTGGGCCATGCAGCACTTCGCTGGGGACGA
CAGCGACAGGCTCAGTGATGAGTCGGACAACGGAGGCTTCTTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00114395-exon-Sc0000235-1564993656:215013..215278 | BlTCONS00114395-exon-Sc0000235-1564993656:215013..215278 | Branchiostoma lanceolatum | exon |
| BlTCONS00114395-exon-Sc0000235-1564993656:216545..216629 | BlTCONS00114395-exon-Sc0000235-1564993656:216545..216629 | Branchiostoma lanceolatum | exon |
| BlTCONS00114395-exon-Sc0000235-1564993656:217061..217208 | BlTCONS00114395-exon-Sc0000235-1564993656:217061..217208 | Branchiostoma lanceolatum | exon |
| BlTCONS00114395-exon-Sc0000235-1564993656:217403..217468 | BlTCONS00114395-exon-Sc0000235-1564993656:217403..217468 | Branchiostoma lanceolatum | exon |
| BlTCONS00114395-exon-Sc0000235-1564993656:217647..217811 | BlTCONS00114395-exon-Sc0000235-1564993656:217647..217811 | Branchiostoma lanceolatum | exon |
| BlTCONS00114395-exon-Sc0000235-1564993656:219272..221290 | BlTCONS00114395-exon-Sc0000235-1564993656:219272..221290 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000235 | genome | Sc0000235:215013..221290 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF056116 |
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