BlTCONS00114234 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00114234
Unique NameBlTCONS00114234
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000234:97204..98352+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00114234 ID=BlTCONS00114234|Name=BlTCONS00114234|organism=Branchiostoma lanceolatum|type=mRNA|length=1149bp|location=Sequence derived from alignment at Sc0000234:97204..98352+ (Branchiostoma lanceolatum)
GAAATGTGGATATATAAACGACAAGTCAACGTCATTTTTACATGCATAAT TCTTAGAATAATAATGACTAGTTAGTATTTTTCGGTCGATCTTTCTTTTA CATGGAACTGAAAGTAATTTTTATCACATATTTATTATTATATTATTTTT TATATTAGACACAAGGGGACAAAAAGTCTGGGAAGAAGTCGTTGCATAAT GACTCACACCAAAATTTGAATATCTTCGTTCCCCAATAGATAAAAGCAAA AGATGGAAGATCCCAGCAGCATCTATGGACAACACGGAACAAAACATACT GGGGAAAAACCTTACATGTGTGGGGAGTGTGGATACAGAGCAGCTCAAAG GTCAGCCCTGTCCCAACATGTGAGAATCCATACTGGAGAAAATCCCTACA AGTGTGACCAGTGTGACTATTCTGCAGCACAGAAATTCAGCTTGGACCAA CACCATGTCACTAAACACACTGGTGAGAAACCCTACATATGTGAGGAGTG TGGATACAAGACAGCTAAAAGGTCTAACCTAGTCCAACATGTGAGAATCC ATACTGGAGAAAAACCCTACAAGTGTGACCAGTGTGACTATTCTGCTGCG TTTAAATCCAACTTGAACCAACACCATGTCACTAAACACACTAGTGAGAA ACCCTACATATGTGAGGAGTGTGGATACAAGACAGCTAAAAGGTCTAACC TAGTCCAACATGTGAGAATCCATACTGGAGAAAAACCCTACAAGTGTGAC CAGTGTGACTATTCTGCTGCGTTTAAATCCAACTTGGACCAACACCATGT CACTAAACACACTAGTGAGAAACCCTACGTATGTGAGGTGTGTGGATACA AGACAGCTGAAAGGTCTCGCCTAGTCCAACATGTGAGAATCCATACTGGC GAAAAACCCTACAGGTGTGACCAGTGTGACTATTCTGCAACTCAGAAATC CAACTTGATCCAACACCATCTCACTAAACACGCAGGTGAAAACGCCTACA TATGTGAGTAGTGTGGATACAAGACAGCTACAATCTGTAACCTATCCCAA CATGTGAGAACTCATACAGGGGAAAACCCTACAAGTGTGACCATTGTGAC TATTCTGCTGCACGGATATCCAACTTGTTCCAACACTATGTATTGGAAC

Coding sequence (CDS) from alignment at Sc0000234:97204..98352+

>BlTCONS00114234 ID=BlTCONS00114234|Name=BlTCONS00114234|organism=Branchiostoma lanceolatum|type=CDS|length=759bp|location=Sequence derived from alignment at Sc0000234:97204..98352+ (Branchiostoma lanceolatum)
ATGGAAGATCCCAGCAGCATCTATGGACAACACGGAACAAAACATACTGG
GGAAAAACCTTACATGTGTGGGGAGTGTGGATACAGAGCAGCTCAAAGGT
CAGCCCTGTCCCAACATGTGAGAATCCATACTGGAGAAAATCCCTACAAG
TGTGACCAGTGTGACTATTCTGCAGCACAGAAATTCAGCTTGGACCAACA
CCATGTCACTAAACACACTGGTGAGAAACCCTACATATGTGAGGAGTGTG
GATACAAGACAGCTAAAAGGTCTAACCTAGTCCAACATGTGAGAATCCAT
ACTGGAGAAAAACCCTACAAGTGTGACCAGTGTGACTATTCTGCTGCGTT
TAAATCCAACTTGAACCAACACCATGTCACTAAACACACTAGTGAGAAAC
CCTACATATGTGAGGAGTGTGGATACAAGACAGCTAAAAGGTCTAACCTA
GTCCAACATGTGAGAATCCATACTGGAGAAAAACCCTACAAGTGTGACCA
GTGTGACTATTCTGCTGCGTTTAAATCCAACTTGGACCAACACCATGTCA
CTAAACACACTAGTGAGAAACCCTACGTATGTGAGGTGTGTGGATACAAG
ACAGCTGAAAGGTCTCGCCTAGTCCAACATGTGAGAATCCATACTGGCGA
AAAACCCTACAGGTGTGACCAGTGTGACTATTCTGCAACTCAGAAATCCA
ACTTGATCCAACACCATCTCACTAAACACGCAGGTGAAAACGCCTACATA
TGTGAGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00114234-exon-Sc0000234-1564993656:97204..98352BlTCONS00114234-exon-Sc0000234-1564993656:97204..98352Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00114234BlTCONS00114234-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000234genomeSc0000234:97204..98352 +
Properties
Property NameValue
GeneIDBlCUFF056039