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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000234:57696..65708+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00114233 ID=BlTCONS00114233|Name=BlTCONS00114233|organism=Branchiostoma lanceolatum|type=mRNA|length=8013bp|location=Sequence derived from alignment at Sc0000234:57696..65708+ (Branchiostoma lanceolatum)
GAGAAATTCGCAGCAGCAAGGTACGACACTACTGCACATTTCAAAATTGT
GGGATCATGTGGCGGAATGGCAGCTTGTTTGGCCTAGAACCCAAGAGGCC
CTGGGTTCGAATCCTGCAATGTGACCGATCTTGGGCCCTTGGGAAAGCCA
CTTTGCATCGCTTTCCTCACTTCACTTATTAGGGGAAGATGAGTACCTAG
CTTTGGTTAGGGACATTCCTCAGATAGGACGTTCCTCGGATAGGATGTTG
AATGGAGGGCCTATGTTTCAGGGGAGACAGACCTCTATAGCATGTTAAAG
AACCCACAACACGTATCAAAAAGAGTAGGCTAGGGGTCCTTCCCAGTGTG
AGTGGATCAAACCTTACAGTCGGTACATAGGCTACAGAATCTCTGAAGCA
AGTTGAAGTTGGTTGCCTCAAAAGAAAGAAGAATAATATCAATTCAATGT
TAGGTCAAGGGGTTATTGATATACAGATACAGAGATGTATTTGTCATGTC
AATGACAAAATATTTTGCCCTGTTTCAGTGCTTGTTCCTCCATATCTGAT
CATTTAAATACATTTATGTATGTATCAATTATTAATCTTTGTCAGTTAAT
GTTATTAGTAGGTAGTCCCCTTATAGTATACATGTATTATTAATTTTGAT
TGGTTAATGTTGTTATAATAGGTAGTCCCCATAATCTGGCCACATAGAGT
ACTGAAGATTGGAATCCATCAATGCAATGTATTACATATCTCTTTTAAGA
ATGTCATTTATATTATTACTCGGGGAAGGAGGATGACCTCCTGATGGTAG
TATTGGAAATGGTTTTGTTTCCGCATTCGCAGCTAGAACTCACATTCCCG
TCGTCGCATTGGTGTGTAACTTGCTAGGTTGGACGTGGTGATGCACAATG
TCTTTGTTACACCGTAACTGCTTTTATACTTATAGTCAATCTATCATGAT
TGTAATTGCACCCCTATATTGACGCACAAGTGGAACTGCCCTCCCATAGA
GACCATAGAGACGGTCCGCTGTCGCCCAATGTCATAAGCAGATATGGGGA
AGATTCTTTCGCTACTTGTTAACCTTAAGTTTTTTAACTGTGTTGTTTCA
GCTTGTCCTTTACAGTGTTTGACATGTCAGGGCAGGGCAGATACAGGAAT
CTATGGGAACACTATTACAAGTGAGTATCCAGATAGTAGTCTTCTTTTTA
AGTCGATTCTCTCTGGATAGGAAATTTTATGTACATGTAAAATAAATGTA
GTAATACCAGTGTTGAGAAGTGGACGCCTAAACTAATGTCTTGCTTCCCC
AGGGATGCCCAGGCCATCATATTCGTCATTGACAGCAGCGACAAGTTGAG
AATGGTGGTGGCGAAAGATGAGTTGGAACAACTTCTCAACAACCAAGGTA
AACAAACACACAAAAAAGCACCAGAACCGTCCCTTTGCTTATTGGGACGG
ACAGACTAGAAAGTTCACCCTGTCCTTCCAAAAACTCTGAACTTGATATT
TTTGTAAACTTGGAATGACAGAAACAACAGAAATTTAATAACATTGGCTT
TCAAATTCCAATTAATTGAATCAAATTTTGCCTTTTCCTTTACGGTGCCC
CAATCATGTTTAATGCCTTTCAACTGGCCTTGCATAGACAATTGCAAGCT
ATTTGAAAAAGAGTAGGGGCATGCCCCGGTGTGCGATGGTCAAAAAACCT
ACAGTCGGCCTCACATGGGTTCCCCCTTAGTAATAGCCTCCGGCTAGTTG
GGCAACCCTGGCATTTACATGCCAAACCAATAAATAAATAAATAAATTGC
AAGCTACCCCCCAAACTATGAGTGGGATAGACAAAACTTTAAAGCTGGAG
ACAGCCACGGTCTCTTATCTAATTGAATCAGTGGTGTTCCTCAGAATTGT
AAATAACCTGTTTCAGCTACACAGTCTCCTCAAATATTTCTAGGAATAAA
GCTTTGGGTAGATTGAACTTCATGGTATAAGTTATAACCCATATTCTCGA
ATGATATAATAATAATAAGTCGTAGGTAAAATTATTTCCATCACTGATGA
AAAGTGTCAGGTGGACACTCGAAACGTTTGATAATTTCATACTGTAATCC
AGTGGTAAAGATTGGATTTCAATTTTATTCTTCAGTTTCCTGGATGACTA
ATATTCACAAATGTAACCCATATTCTCATTCCAATACTGTAAATGCAGAA
ATGTTTGTGGTGGTTTTATGTTTGCAGTTTTCGCGGCAACCGTTTCACCG
CGAACTTAAAACCACTGCGAACATTTTTGTCCAGTGCTGTAACAGTATGT
GACTATAGCCCTGCTGCAGACTTAAAACCACTGCAAACACTTCATTTTCA
CCTTAGCGCGAAATAAAAACCACCCGAACTTAAATACATTTACAGTAATG
TGTCATATGTTTGCATTCTGAAAAGTCAGTTTTTGTACTTTTTTATCCAA
TGAATTTCTCCCAGATATCCTGAGCAAGCGGATCCCCATCCTATTCTATG
CCAACAAGATGGACATGCAGGAATCCTTGTCAGCTGTTAAGGTCAGTCTT
GTCCTGAAGGGAAGGGCTTCTTAGAAAGGGTTTGGATGTCTTTAAGTTGG
TTCATTTTTAGAAGTAAGGCCACACCAATTTTTTTTGTTGCTTCTCGGAA
TAGCCTATCCTGTTTTCCCATTTTGAAAAAAAAGGGTCGCTTTTCCCATT
CACAAATTTTTACTCATGATTTTACTATTTTTTCAGTTTTTAAACTCAAT
AGCCATCAAAAAAAGGCCTGCACATACCTAAAAAGTGTGGTCAAATGTTA
TCATAAGTTTTATTTATTTCTCAATATCAATCCATATATTACATGGCAAA
GGGTATACGTAATTTTGTCACTGAAATTATAGTAGTAGAAAGGGGACGGT
GCATTGCAAAAAACGAGCCATACAAAGCTGACACTTGAATAATCCTTTTA
TTCTTTATGTTATTTCAATGCTTATCTTCACCCCAGACTATTTGCAAACA
AATTTTTTTTTTTTTTTGTCCTGTCGCTCCAATTTTTTTCTGAAAAAAAT
CTGAGAATCAACAAATGAAATTGGTGTGGCTTAAGGAAAGTGATCTTGCT
CCAGTTTCAGCTCACTGAAGAGCTATTCATCCACTTGTCAAAGAGAGGAG
CCTTTATTTGAATTCAAAGAAATAAGCAAAAATGATTAATTTTGTTTCAC
ATCGGAATACTTGTTTTGCTGAAAATTGACACCTCCATTTTGTTTTTCAG
GTTTCCCAGATGATGGGTCTTGAAGCCATCAAGGACAAACCATGGCACAT
ATGGTATGTTAGAAGCTTTTTCTACACATCAACAAATACAACTTTATGCA
AGGCTAGTTATGTGAGATTTCATGCTACATTTTAGAATAAACAAATAGTT
GTCATGTAACCTGCCACAGCCTAACAACTTATGACTTATATTATATCATA
AAGCATCAAACATGTGAATTATTGATACTGCTCTGAAATGATTTGAGAAA
TAGGAAAAGCATCTAGCTCAGTGTGTCATACCAGGTCAAGTGGAAAGTGG
TCACTCCTGCTCAATGTCTTTTGCAATAGTTTGATGTTTGTGAAAATAAA
GGAGTCTATTTCTGAAATTATAAGGGTACAAGAAAATAGGGACATCCCTC
AGGTAGGATGTTAAATGGAGGTCCCGTGTTTGAGGAGAGCCATAGTATCA
TGAGCACGTGAAAGAACCCACCACACTTATATCGAAAAGATTATGGTCCT
TTCCAGTGTGACTGAATCAAATATATCTGTCCGGATATTCAGCTTGTACT
CTTCAGTACACACCTGGTGTGTTACACATGTATGTCATGGGGCTGTTTAT
TGGGTATGAAATACAAACAAACAAACAGGCTTATAATGTAATGTTTCTAA
TGTTTTGCACATTGTAAATTACATATTGTCAGACATGTTTGTTTCCCAAT
GCTTACAGTGCCAGCAATGCGATATCAGGAGAAGGCCTTGATGAGGGGGT
AGAGTGGGTCACAGGTCAGACATTACTACGTTTCATCCTGTAGATGAATT
CAATTATATTCCAGGAGTAGACAGACAGTCCTTTCTGTGCGCAAATAGGT
CAAGATACTGTAAATGCAGAAATGTTTGTGGTGGTTTTATGTTCACGGTT
TTCGCATTGAACTCTTCACTGCAAACCTAAAAGCGTCAGGGAAAGCTGTT
CCATAATGTGACTGTAGCGCTACTATTGTTTCAAACGTGATCTCAAAACC
ACCGCGAACACTCCATTTTCTCCCTTTCGCAAAATTAAATCTCTACAAAC
ATTTCTGCATTTACAGTATTAGAGCATGTTTAGCTCTTAGAAACTGTAGT
GTAAAGGGTAGTTAACCTTGTTCCTGCTACCTAACTCTGTAACTGAGAAT
GGGGTGCCAAACGGCTACATGTACCTCAGTGTGCTACAGGTTTAACCTCA
AATAGTGATATACATTTGTACTCATATACCTTGTAATTACTATGTTTAAA
GCTCTGTATTTATGGTAGTGTATATGAAGTTGTGGAAGACCTATTCTTTG
GTTGTGTCACTTGTGTATCATTGGCAACATTGACAACTACCTGTATGTAA
TTTACTTTGAATTTGGAACTGACTAGCTTTTGATATAATTTATTCATGAG
AGGAATGGGCCCAATTTACACACACGTTTTTAAGTGACTGGAAGTCATTC
AGTCGGCCAATGAGAGACCGCCTTTTAACATACCCACGGAATAATCAAAC
TCAACCTGATTGGTTGAAATAATCAAACTCAGCCAGCAGCTAAGAAAACT
CAGAAAATGTGTGTCTAAATCGGGCCATCTTTACCCCTTCTATCTTTAGA
AATAAGACATATTAACTATTCTTTACTTTTACTTGCAGATCAAATCCGAT
CCATGAAGAAATAGTAGCCTGTTTAGAAGACCGGAGGGGAGAATGGGGGT
TGAATGTGTCAAATTGCAATACATGTAAAATACCTTAATGTACTGAAATT
GCACGATGTAATAATATGTCTGTAGCTGCACCCCCTGTTGTTTGGTTGTG
GAACTGCACATTGTAGCAGACTGTACTTATTTTGTAAACAGGTAGTACTT
TGTTAGGAGGTGTGTTTTTTAAAGCTGCCATTTCATTTCTGGCAGAATGA
GCAAGAAAGTTACACAAACATTTCAACCAGGGGTCCCAAATAAACCACAA
TCATAATACATTATAGTTTATAAATTTGGATTGCTATGTAAAATAAATGG
TAATTGATAAGAACTTAGATATGCTACAGCATATTCAAAGCGAATACATC
AAGATCTTGGAAATTTCAAAAATTGATTTTGTTATGTGCTTTCCATGTCG
ACTTTGAGGTTCTTAATGTATATCAAAATTATGTATATTTGCATATATAT
TGAAAGCTTTATGATTAAATTCAGACCAATGGAGGAAGTATGGACAAACC
GAGCAATTTTAGTTTAAAAGTTACTCTGAAGTGACAGATTTTTTTTTAAC
ATTCCATTTATCCCAGTCTTCTCAGTCTGGTCTTCTCAGATTTATGTCAA
ATATTGAATATAAAATTCTCACCATCTTTGAACAAAAATATATTATATTG
CCAATTGTTAAAAGTTTAATGTTGTATCATAGTACATACTTCTGTAATCT
ACTTTGCTTAGAAGACTTGTCCAGCCATAGAGTTAGAGAGGGTTGTTAAA
ATTGGAAGATCAAATAGAAACTGGCCAGAACGTCGCCGGAACGTAAACAG
TTCGCGTATTTAAGGTTAATATCTCGCATATAGGTTTATTTAGTTGTGTC
CAAAGACATAGTCTTATGCAACGGCTGTTACTCCGATGCAACGTTGACCC
AAGAGAACAAAAGAGATTCGGCAGTTGTAATAGGTTTAAATAGCAGGCTA
ATTGCCATATACTCATTACGTTCCGGCGACGTGCTAAACTGGCCAAAATA
GGGATACTTTAGTCTCTACCAGACTGACTACGCCGGCTATAGGGTGAATA
TTTGCCAGGAAAGTTTGGCCACCAGAGGGTTTCATTTGCAGGCGCAGTTC
GAAGGGGAAATATTAACCTTCCCGTGAACTGACTCTCCTAGCCTGGAAAC
CATACCCTCTGTGGCTCCCCGATATCTCTACGGCGTTGGGAGTGACCCCC
GCCCGCCCAGACAGCTTAGCCTGCTCGGGTGTTGGTTTACGGCCTTGGAT
TAAATTAGCTCGCCACCCATGGCGGCGAAAGTAGGATGGCAGCGAAAGTA
GAAAGACAGGCTATCAGAAACGGTTCAATAAAGCAGACTGGGCCCGGTCA
ACCCCTAAGCCGACCCCCAGAGACTGGGACCAGGCTATGACTCTCCTGGA
CAATAAGTCCCCTTTTTTGCCAAATTCTACGACCTGTACCCTTGTAGGAA
GGCCTTTTGGAGGCTAGGGATACTTGGTAGGGGGACTGAGGTTTCCTTGG
ACGACAATATTTATTCTACTGGCATTGGAAATGGTAACTCTATAGCCCGT
TAACCCTTCTGGCAAATGGGTTAGCCATTTTCTACTCTTTTAACAGCAGC
CTACAAAGTCTGGTAGAGACTAGGTTGTTACATATTGTTTGCTTTAACTT
TTAGATTAGGTTAGCTGTGAGGATATGGTGACAAGACTGTGACAGAGATA
TACATTGTACATGTATGTCGCATACTTTTGATTTGTGATGTGGATATGTA
CTTGTGGATGTTCAGTTTATCTTTATGATATTTTCCAGCCTCTTTAAAAC
CGGACCAACTTGGAAGGCAACGTGTACATGATACACATGTATGTCCGAGT
TCCTTTTCTCTTGAGAAGACATTGTAGACCATATTGTATATTGGTAGTCC
TTTGTTGTAAGGCACTAGACATGTGCTTTAGGACCCCACCACACTTCTCA
AGTCTCTTATGATATGGACAAATTGTATTACTCTCCAAGTAGAGGTTGGC
GAACAAAATTGTTACCTTCTTTTTAATGGGTGCCCATCCTGATTAAAGGA
GTCAACTGTCAGAAAACTGGTACTAGTCAGAAGAATGTACATTCAACCTC
TGCTTGAGGAGAAAAATGTCGTTCAGACATTTACATACAGAACGTGATGC
TAGTTTACCAGTTGATCGATGTATAGAATATGTAGTTCATACTTTTCAAT
GATAACACATGGCATAGCTTTGGCCTCATCTTTATGATGTAGGAGTAAAA
CAGTGTGGCCTTTCTTGACATGGTTACAACACTGCAGTTCTGCCCTGCTC
TGGTAGGGGGCACTGTGAGCTCATGTTTGTTTCCACCAGTCACAAGCCCC
TACGACCATTGAGGTCATGAATCTGAACTGAACACAAGTTACCAAAAGCA
AAGAATGTTATTCCAACAGTGAAATGACCATTATGTGTATAATTCGGACT
TGAAAACTTTGTTTTTCTTACATTCCGATGTCTTCTCAAAATACTCAAAG
CTGTTCTGAAACAACATTTCAAGTAGGAAATTCTTTTATTTTAATAGGTG
TCTCATACTATCTCAAGTCAAAAGTGGTCACTTCCGCTCCTTGTATTTTG
CCGTAGTTTCATGTTTGTGTAAATAAAGAGATTTATTTCTGACAGTTTTG
TAATATTACCATTTGTGGTCTTATCTCACAAGATATTGCAATACACGTCT
TTGTATATATAACTGCAGCACACAATACAGTGTGTTTGTGTGTTTGTTTG
TTTGTGGCTTGCTGCCTCTCACATCAGACTTTCTACCTAGTAATTTTACC
GCACTACTGGACAGATATGCGTCACAGACCCCGGGGTATTCTGTTACCAT
AGTGATGATCAATCAGGGCATAATTACCGTACCTCAGGCCATTCTTTGCA
ACTTTTCATGTCTTGACAAGACAAAAAACATCGAACACAACCACAGTGTT
AGAACAACAACTTCAAATCAAGAATGACATAAATAGGTGTTCATCTGGCA
TCAACATGCCAACAACAATAAACAAATCTGCAAAGAACCCTTATATGAAA
TTAAAGTGACTCC Coding sequence (CDS) from alignment at Sc0000234:57696..65708+ >BlTCONS00114233 ID=BlTCONS00114233|Name=BlTCONS00114233|organism=Branchiostoma lanceolatum|type=CDS|length=396bp|location=Sequence derived from alignment at Sc0000234:57696..65708+ (Branchiostoma lanceolatum)
GAAATTCGCAGCAGCAAGAGCTTGTCCTTTACAGTGTTTGACATGTCAGG
GCAGGGCAGATACAGGAATCTATGGGAACACTATTACAAGGATGCCCAGG
CCATCATATTCGTCATTGACAGCAGCGACAAGTTGAGAATGGTGGTGGCG
AAAGATGAGTTGGAACAACTTCTCAACAACCAAGATATCCTGAGCAAGCG
GATCCCCATCCTATTCTATGCCAACAAGATGGACATGCAGGAATCCTTGT
CAGCTGTTAAGGTTTCCCAGATGATGGGTCTTGAAGCCATCAAGGACAAA
CCATGGCACATATGTGCCAGCAATGCGATATCAGGAGAAGGCCTTGATGA
GGGGGTAGAGTGGGTCACAGATCAAATCCGATCCATGAAGAAATAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00114233-exon-Sc0000234-1564993656:57696..57715 | BlTCONS00114233-exon-Sc0000234-1564993656:57696..57715 | Branchiostoma lanceolatum | exon |
| BlTCONS00114233-exon-Sc0000234-1564993656:58795..58865 | BlTCONS00114233-exon-Sc0000234-1564993656:58795..58865 | Branchiostoma lanceolatum | exon |
| BlTCONS00114233-exon-Sc0000234-1564993656:58998..59092 | BlTCONS00114233-exon-Sc0000234-1564993656:58998..59092 | Branchiostoma lanceolatum | exon |
| BlTCONS00114233-exon-Sc0000234-1564993656:60160..60236 | BlTCONS00114233-exon-Sc0000234-1564993656:60160..60236 | Branchiostoma lanceolatum | exon |
| BlTCONS00114233-exon-Sc0000234-1564993656:60946..60998 | BlTCONS00114233-exon-Sc0000234-1564993656:60946..60998 | Branchiostoma lanceolatum | exon |
| BlTCONS00114233-exon-Sc0000234-1564993656:61654..61709 | BlTCONS00114233-exon-Sc0000234-1564993656:61654..61709 | Branchiostoma lanceolatum | exon |
| BlTCONS00114233-exon-Sc0000234-1564993656:62584..65708 | BlTCONS00114233-exon-Sc0000234-1564993656:62584..65708 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000234 | genome | Sc0000234:57696..65708 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF056038 |
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