BlTCONS00114219 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00114219
Unique NameBlTCONS00114219
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000234:258..2468+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00114219 ID=BlTCONS00114219|Name=BlTCONS00114219|organism=Branchiostoma lanceolatum|type=mRNA|length=2211bp|location=Sequence derived from alignment at Sc0000234:258..2468+ (Branchiostoma lanceolatum)
CTCTAACTGAGGGGGGGATGCGTGTAAAGTGCCTTTCCCAAGGGCACAAC GTCGGGGCGTAAGTTCGGACATGTCTCTGGGCACAACCCGGGATTCGATC CTGGGTCCAATTGTTTGACAGCCGCGCGCTCTACCACTTACGCCACACGA CGCCACATAAGACATAGCTGATACTCTAAAACATACTATCTATCAAATTT TCTGAACTGGCTTATCCCAACTATTCAATCATAACGCAGAACTACGAAAA ACTGTGTGAAAAACTACGTGTCTATCTTGACCACCTACGTCGTTCTGGAA CAGCATTACCAAACAATCGCTCCTTGCTCGTGGTAACCGGATTGTTTATC GTTCTATAAACACACCTGCATTCTGTTCGAAGACCTAGGTGCGTCAAGAC TAGTGTCCTTGAATCGTACGTCTAACTGTGAAATATCTTGATTACATAAT TGCTTCATGATGGCTAGCAAACGAGGATACGTGGCTGACATGAGCACCCC AGCTGTAAGTAGACTTTAAGTCAAATTGGATCAGTGTCATAGTACATGCT AAACTTTCTTCCAATACTAAGGTATACACGGATCAATTTTTCGACGACCA CTGTCGCCTTTTTCAGGATCACAACTATCAACCCAGTGCTTATTGATCCT AAGAAGGCGACAGTAGTGGTCGAAAATTTGATCCGTGTAAACATTAGTGT TGGAGGAAAGTTTGGCATTATACTATGATTACTATCAACTCATCACGTAG TAGACGAATCTTATTCAAATTATCATGGAGGCACATCTAATTGTAAGTTT TGTTTGCTTCGTGATGTACACCATTCCTGTCGCTTGAAAACATCGACCTG TTGTTGGAACTTGTAAATAAGAATGTACTCTAGCTATGCCATCTGTGTGT TGAATCAATGATACCCAATGATTGTTTTCCTAATGATGATGCCATGATCT TTGGGACGCGTATCTTCTTTGTATTTTATTTGAGTGAAACAGGTGCATCA ATGACTATATGACTGCAGTGTCTTCATTCTATGCTTTAGCTATTCAATGT TATTTTGTTATCATTTCTTGGCGTGGGGTGAGAACAAGTCACCTAGTCTA GGCATAAACAGAGATAAATGAGTGATGTAGTCTTTTTATGTTCAAACAGG TGGGAAAAAAGTCAAAGTCAAAGAGGAGATATGTCCCGGTTCGTGGGGAT GACAGGGACTCGTTATCATGGCTCCATTCGGCATACTATCCGGACTCAAG ACTCCATTACTCGAGTTATCCGGACCCCAGGCTACAGCAGTCGTACCGTC CGGACCCCAGGCTTCCCCAGCTCGACCATCCGGACCCGAGGCTCACCGAG GGCAACCAGTCGTACCTGTGGCATCACAACTCTTCATTGTTCGGCCAGAG TTCTCATGTTCAGTCCGCAGCCTTGCCACCTCCCGTTTTCCCACCGTGTC CGCCAACTCCAGAAGAAGAGCAGATGGACTGGGAGCCCAGCATCTATACT GAGAACATGGCGTGGTCAAGCAGCAAGATGGACGAGGAAATCCCTATGGA ATGGGACTAATCATAACTAGAATAGCTAGTTGGACGACAGGTGACACACG GCTCTACGAGTAATGGCCTTGGGCGGAAGAGCTGGCCAAGAAAGAGAAGC CAAGAAAGAAACGGAGAAGACTCCATTCCGGCACATGGAATGGAAAAAGC TGTTTGGAGAATGGAGAGGGACTGAGTAAAGTTACCAGGCTAATGTTAGA AGGAGACCTACGGTTCTAAAATGTGCGGTATAAGACGAAGAGAAGTGGTT GGTGGCCGAACAGGAAACGGAAAAGACTTTATTTCCGCGGTACATAGCAA AGACTGTCTGTGTTGTCTGTTGGTTTTAGGGTGTATTGTGAAAGGACGCT TAGTTTTGCTCTCTATGTATTGCAAAGGAATTTACATCGATACATATTAC ATCGTTGTTGTAAGATATTTGTTGTTGACCTGGTACAGAACTGAATTATC CAACGAATTACCAGACACCTGTAATGTGGGCGGTAGAAAACCACATGTCG GGTTTGCAAAGATGTTTAAAGGATTCTACCGAAGTTCCACATTAATTAAA GGATTGCTGAAATAACACCTGCTTGCTTTTATCCATTGTACCATTTAATA AGTGCCATACAAATGCCTTTGTCTTTCATCAAATAGATCTCCAGTGTACG TATGCTGCAGC

Coding sequence (CDS) from alignment at Sc0000234:258..2468+

>BlTCONS00114219 ID=BlTCONS00114219|Name=BlTCONS00114219|organism=Branchiostoma lanceolatum|type=CDS|length=459bp|location=Sequence derived from alignment at Sc0000234:258..2468+ (Branchiostoma lanceolatum)
ATGATGGCTAGCAAACGAGGATACGTGGCTGACATGAGCACCCCAGCTGT
GGGAAAAAAGTCAAAGTCAAAGAGGAGATATGTCCCGGTTCGTGGGGATG
ACAGGGACTCGTTATCATGGCTCCATTCGGCATACTATCCGGACTCAAGA
CTCCATTACTCGAGTTATCCGGACCCCAGGCTACAGCAGTCGTACCGTCC
GGACCCCAGGCTTCCCCAGCTCGACCATCCGGACCCGAGGCTCACCGAGG
GCAACCAGTCGTACCTGTGGCATCACAACTCTTCATTGTTCGGCCAGAGT
TCTCATGTTCAGTCCGCAGCCTTGCCACCTCCCGTTTTCCCACCGTGTCC
GCCAACTCCAGAAGAAGAGCAGATGGACTGGGAGCCCAGCATCTATACTG
AGAACATGGCGTGGTCAAGCAGCAAGATGGACGAGGAAATCCCTATGGAA
TGGGACTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00114219-exon-Sc0000234-1564993656:258..761BlTCONS00114219-exon-Sc0000234-1564993656:258..761Branchiostoma lanceolatumexon
BlTCONS00114219-exon-Sc0000234-1564993656:1407..2468BlTCONS00114219-exon-Sc0000234-1564993656:1407..2468Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00114219BlTCONS00114219-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000234genomeSc0000234:258..2468 +
Properties
Property NameValue
GeneIDBlCUFF056029