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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000233:412796..419357+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00114144 ID=BlTCONS00114144|Name=BlTCONS00114144|organism=Branchiostoma lanceolatum|type=mRNA|length=6562bp|location=Sequence derived from alignment at Sc0000233:412796..419357+ (Branchiostoma lanceolatum)
ATTGAGGTCATATTCAACTCACGAAAAGACGGTCGGATTTGAGACGATAT
TTTTCATCGTTTGCGAGTCTGTTTCTGCTGTAAATGAGCAGCATGGAGCT
AAAAACGGTGTGTGAGAGACTGGATGAACTTGTTGTTGACCTGTTTGACA
AGTTGGAGGACCTCACAGCGGCGAGGAAGAGAATGGACGATCATTTGAAG
CAGGTTTGTAAAAGTGGGGAGGGGGGCGGGGCGATAAATTATAATTTTCA
GCAGTCGTAGCTGATTGATTTTCAGAACCGATTCAACGACATGGGTACAG
GGTATGTAGATTGCTATTATGCTTCGCCGCGTTTTAATTTGTCGGTATAC
CGCGTATCATTTCGGCAAAAAGCATCAGAATTATTCAGCAGAAATTATGA
CAAGCCGGCCGTGGCGACTCTTGGAGGGAGTATGATACTAGCAAGGACCT
TGATACTAGTAAATGTATATAACGTTAGTAGGCTTTTTAGCCCTCTCAAG
ATATATAATGTAGAACCAAAATGCGCCCTCCAAGAGTCGCCACGGCTACA
GAATTACTTGAATATTTATAGTACAGTAGAAGTATCCAAGTAGTACTAGT
AGATATCCAAGTAGTAGATATCCAAGCAAGTACATGTGTAGTTAAAAGTG
GTATCAGGACAACTCGGCCCCTGGGACAACTCGGCCCCTAGCCATTCAGG
ACAACTCGGCACCGAGCCCCAAAACTGACATAGATCAGCAAACAGAACAG
AAACTTTTTAAAATCCATGTGAGGAATAAAAATGATGATGTTTGACTGCC
AAACATTTCGTCTAAAAAAATAGGAAATTGTGGAACCCTGCAGGTTACTT
CGCCAGAACGCTTGAATATCAATAAGGAAGTTTTATCATGTCGGTTGTCT
CGAAAAGTTTTGGAAGTCTACAAACTGTTAAAATCTATGACCAACAAAAC
AGAATGAACTGCTATACATTTAGTTTCATCGGTAATAAGTTATAAGCACT
TTCATAACAGAACATAAGCGTAGCGAGTTCGTGAAAGAGCGTCGAAAATA
ACAAACAAAATGGCGTCGCCGCACCGGCCCGCAACATGTTTTTGATGGTC
TTGTAACGTTTGAGACTTACGAAAATACAAAAATGCTTACTCTCATCTCC
CAAATAAACGTACCGGTACGTTTATTTTTTTCAGCCTCAAAATCCACCCA
GTACGTTCTTATTTTGGACAGTACGTTTATTGTTTTTTGAAAATGCATTA
GGGCTGTTCTTACCAGAGATCCCAAATATAACGAAAGTTAAGTTTTTTCC
CCATATTTCCCCGATATTTGTGCTCCTAAATCGCTACTTTAAGATCAAAT
GACGTGGATTTCCCCGCCGCTACAATGACCCGGCATTTGTGAAATCCTGG
CGGTACTAACATATTGGTCGATCTCGCTACAAATTAAACGTTGTGATTTA
AGGGAAAATAAGACGGCACAATGAAGTTTTGAAATGTATTTTCCATATAC
ACAACTTTGACAGTCTCTATTTACATCGTAAATCATAGCACGCTGATCAG
AAAACAAATTGCATGAATATGCCAGCGGCGCACCGTGTTTCAAGTACGCA
TGTAAAATTACTCACGTGAGATCAAGGAGCCAAAACTTTGAAAATTTAAA
AACACCACGTAAAAATTGTGTCTTAGTATTAACAACTGTACAATCACTTT
CAAAATATACCAATAGGTTTCAATCCTACCACAAATATGAACATTTAGTC
CTTCGAAAATCGCCACAGTAAAGACGCACGGCNAGCACCGCTGGCCCCCG
GTTAGGGGTCATAGCGAGGAACCTATGCCCAATTTTCCCAACAATGTTGG
ATGCTATACATTTACGTGTTACAAAGAGTAGGGGTCCTTCCCAGTGTGAG
AGGATCAAACCTTACTGTCTGGGCCGAGTTGACATCTTGAAAATGTGATA
GTCACCTGTTATGTCAATCTTACCACAAATATGGTAAATCTGAATAGATG
AATCAGTCATAAATGAATAAAAAGAACCTACCTGCTTAGGACAGAAGTAG
CATGGACACAGTTTACGTGACAATTTGGTAATTTTCCGGGGGGTATGTTT
ATTCCGGGGGGTACGTTTATTAGATTTCGAAGATTTTTCCGGGGGGTATG
TTTATTCCGGGGGGTATGTTTATTTGGGAGATGAGAGTATTTATGGACTG
AGTTTTGTTTCTTGAAATGCTTATTCCACTTATCAGCCCGTCAGTTCGGT
AGAATTATCATTCTTCGAGCCCCAAATACACTTATCATGCACTGAGAAAT
AGGTGCCGAGTTGTCCTGAGCTTGGTGCCGAGTTGTCTTGAATGGCCAGG
GGCCGAGTTGTCCCAGGGGCCGAGTTGTCTCGGAATCGTTAAAAGTTGAT
ATCAAAATACTGTAGTAGATATCCAAGCAAGTAGTAGATATCCAAGTAGC
AGATATCCAAGTACATGTAGTAGATATCCAAGTTTTAGGTATCCAAGTAC
TAGTAGTAGATATGCAAGTTTTTAGGTACCCAAGTAGTAGATATCCAAGT
AGTAGATACAGTACTATGAAAACTATTTGGCTTAATATAACGACGCTGTC
TATAAATCCTAGCTAAAAGCCTGTATAAATGTAATCAAGGAGGTTTAATT
TCCTTGATGCAACATTATGGTGCAACTAGATACAATCAAGGATTATAAAC
CTCCTTGATACAATGTAGGCTTTACTGACTATGTGGCTAACGATCTGTTG
ATCATATTTCAGGGTTTCTTCAACCTAGCGAAGGCACGGTACTCCCTTGG
GGTGAAGGGTGTGGGACAGATCCAGTACGCCGCCATCATGGATCCACTGG
TCCATGTACACGTCAGGTGAAGTTGAAAATCTCAGGCACATGATTGGTGA
AATGCCATATAATGTTACGTAATTATGTACTTACATTGAGTCGGTAAGAT
AAAGCTGCTTAAAAACTGATTTCGCCAACAGTTGCCTTACTTTTTAAAGT
GATTGTCCCACCAATGACACTAAAATGCAACGGTTCCTGATTTTCATTAC
AATCAGCCATCAATATCATTTCTATTTCAGTGAAGAAGATGGCTGCAACA
AATTCAATCTAGACAGAATCATTCCCACCAAGTCCAGCTCTGGAGCTGTC
AAGAAAGTATCCTTTGATGACCAAGGTAAGAAATTCATTGTTTCAAAACT
TATCCAATCTGAGAAAAACAGTGTTCACTTTAGTCTTTGGCTTACTTTGG
AAAAAGTACTCCATATAAGATGTGTAAACATGAAAAGAGCAAGAACAAAA
AAAATAGTTTCAATACTGTATACGTTGTTGATATCCAAATAGTAGAAATC
CAAGTAGTAGATATCAAAATACATGTAGTTTATTTGTAGGTATCCATATT
AGATATCCAAGTGGTAGATATCCAAGTAGTAGATATCTGATTAGTACAAT
GTACATATTCAAGTACATGTAGTAGATAGTGAGTAGTAGATATCCAAGTA
GTAGATATCCAAATAGTAGATATCCAAGTACATGTACATGTAGTAGATAT
CCAAATACATGTAGTAGATATCCAAGTACATGTACATGTAGTAGATATCC
AAATACATGTAGTAGATATCCAAGTACATGTACATGCAGTAGATATCCAA
ATACATGTAGTAGATATCCAAGTACATGTACATGCAGTGGATATCCAAAT
GGTAGATATCCAAGTATGTATGTGTAACCATTTGTTTCTTTGTGTGATGA
ATTTTCACTCAGAAAGCAAGGTGCAACGAAGACAATGTAGATATCCAAAT
AGTAGATATCCAAGTACATGTAGTAGATTTCCAAGTACATGTAGTAGATA
TTCAAGTAGTAGATATCCAAATACATGTAGTAGATATCCAAGTGGTAGAT
ATCCAAGGACATGTATGTATGTGTAACCATTTGTTTTTTTCGTGTGATAC
ATTTCCACTCAGAAAGCAAAGTGCGACGAAGACACACTGGCAGAGGGGAT
GAAGAGAATGATGAACAGAAGGAGAGATCTGATGAAGGAGAGGAGGATGA
AGAGGTTGCACAGTTAAGCAGCGGTGTGGAGGAGCTAGAGTTACGTCAGG
TCGTTAACCCCCACAGCCTACAGGACCCGCTGAGGTGGTTTGGCATCCTG
GTGCCACCCTGTCTCAGACATGGGCAGCATAGCTTCTCCCAGGGTAGGTT
CTTTTCTTTTCTTTTCTGTTCGTTTCTTTTGATGGTACGTTATGAGTTCT
CAGTAAAGGTAAAGCTGTCATCCTCAATTGAGGTGAAGCATGATGCTTTT
TCAAGTAGCTAGTGTGGTAGTGCAATGCGGCTTCGCTACGGCTCGCGTTT
TTGGCCAAGCACACCGGGTCACCCCTACTCTTCTCGATAAGTGTGTTGGG
TTCTTTTACGTGCAGAGGTTTGAGGGCAAATCTCCCTCATACATGGGGCT
GCCGGCTTTACGTCACCATCCGAAATGACGAATGCAATCCCTTACAACAT
GTCCGAGCTGAGTTGGCCCCTAGGATCGAACTCGGGCCCCCGGATCCACG
GAATTTGATCCAGATGGCGAAGCAGCGGGGTTGCGTTACCGCTTGCACCA
CGGGAACATGTAGATAGATGTATATGATTGTGTAATCTGCAACCTCTTTA
GGTACACTTTGTAGACAGTCTACTGATATCACCATCATTAATTCATTCTT
TCTTTATTTGGTCAAAGTCGTATGGTTTTGAAAAAAAATATTTGTATCTT
TGCTAATTTTCTAAGTTTGCTATTCTTGAGATTTGGTTAAAGATGGTTGG
AGAAGACAGAAAAATGTAAGGTAGAAGCTTTGAGTTGCAGTTCCTATAGA
AGTTGTAAGAGGGTGCTTGGGCATTAATATTGTCCGTTATATGGTAGTAC
CTGTCCCACGACATCCTGCATTATGTATAAATAAATCATCTTTCCTCCTC
TTACAATTATAATTCTTTCCATACAGTTGTCACTGACTTGTCAGACAACC
ATCCACCATGTGTGTTACACACAAAAACCAACTCATAAAATTTCAAATCA
TTGTTTTTGCTGCAGTTATAGCTCAGTCCTGCCAGGTGGCCAACCTGCAG
TCCCAGATTGACCAGTTGCGGCTGGAGTACCGTCAGCTTCTCCGCCAGAA
GCAGCAGCTAGTGCAACAATCCGCCTAACTCTACAACCTACAGTCTTCCA
TTGTTGTTGCACTGATAGTTATAAGTTGTCCTAGAGATTACATTGTAAGT
ACAGTGCACTGTCATCAAATTTTTCCCAATGGACTTGAAACTTCAATTAC
ATTTCTACATTTGTATTTCATGGGGTTTTTTTTTTGGGGGGGGGGGCAAA
AGTTAGGCATTTTTGGCCTCTAAGTTTGAGTCTTTTTGTCAGAACTCTAT
GACGTGAATACCTAGCCTGAGTAGGCCGGGAGTGGAGCTTGGGTAGCGCA
GCGGAGCTTGTGTAGCACAGCGGAGCCTGTGTAGCGGACGGAAGCTAAAA
AGGCTGGTACTCAGTCTAGTATATACCAACATATTTATTAATGCTGCAAG
AGAGAATCACATATTAGATAAGTAGGAAAGAATGTACTCCACTCTACTAC
ACTACTCTACTACTTTACTGTATTGTATTGTATTGTATTGTACATGTTGC
AAATCTTACAACAGGAGCAAATTATATGGCTGATTTTTTTCCTTCCAAGC
ACAACACAAATATGTTGTGCTTTCAGGCAAGTTGATCCATGTTTTAAGTC
ATGTTTGAGAGGTTTATTTTGTAGCAGAATAGAATGTCGCTTCTGTAGTT
AAATGTTATAAATTTAGGGACAGTCGGACATAGATAGCACACTATGTTAT
GTACATCTAAGAGGGTTGGACATCTGAAAAGATCCCTATGTTACTTGAGC
TACTTTTATGATATAGAGACAACTTAATTCATTCCATGTCTGAAAATTCT
CAAACGCTAGTTACTTTAATTTCAGGAAGAATATATCAAATCTAAGCTAA
TTTTTAGATTGAAGCGTTATTTGAAATCCCAAGTAAAAATTTTCTATTAG
AAATGTGAAGCTTTTTTACACCACATATTTAAGGAATATTCTAATTTTGC
AAAGTAAGAGCTATGTCCTTGGTAAGAGAGATAAGATTATTTGTTGAAGA
TGTAACAAAAAGGTAGGACATGACTTTCTCTAATTGACATGACTAGGCAA
TTTGTATTGAAATGTAGAAACTTGTGCAATAAACGGTAATGCAATTTGTA
TATCACGATGTTACACATATAGGATGGACCACATACTAGCCAGTAACATG
CATTGTGTTCATGCACCTACATGTGTATTTCTGTATGATTATATAGATAC
TACTATGAATAGCACCGGAACTACTATGAGGCAAATATAGTAAGATTTAT
TTAGAATAGTAAAAGTAGCTACCTACACTTGTAGCTTTTTGAGATTGTAC
ATGATTGATGATAAAGCTATTGATAGCAATAGAGACCTCTGGTTATAAAG
GTATAAGAGATGGTTCACAATCTTCTGTTAGGCAGAGACGACTAAAATAA
ACAACACAAGAG Coding sequence (CDS) from alignment at Sc0000233:412796..419357+ >BlTCONS00114144 ID=BlTCONS00114144|Name=BlTCONS00114144|organism=Branchiostoma lanceolatum|type=CDS|length=663bp|location=Sequence derived from alignment at Sc0000233:412796..419357+ (Branchiostoma lanceolatum)
ATGAGCAGCATGGAGCTAAAAACGGTGTGTGAGAGACTGGATGAACTTGT
TGTTGACCTGTTTGACAAGTTGGAGGACCTCACAGCGGCGAGGAAGAGAA
TGGACGATCATTTGAAGCAGGGTTTCTTCAACCTAGCGAAGGCACGGTAC
TCCCTTGGGGTGAAGGGTGTGGGACAGATCCAGTACGCCGCCATCATGGA
TCCACTGGTCCATGTACACGTCAGTGAAGAAGATGGCTGCAACAAATTCA
ATCTAGACAGAATCATTCCCACCAAGTCCAGCTCTGGAGCTGTCAAGAAA
GTATCCTTTGATGACCAAGAAAGCAAAGTGCGACGAAGACACACTGGCAG
AGGGGATGAAGAGAATGATGAACAGAAGGAGAGATCTGATGAAGGAGAGG
AGGATGAAGAGGTTGCACAGTTAAGCAGCGGTGTGGAGGAGCTAGAGTTA
CGTCAGGTCGTTAACCCCCACAGCCTACAGGACCCGCTGAGGTGGTTTGG
CATCCTGGTGCCACCCTGTCTCAGACATGGGCAGCATAGCTTCTCCCAGG
TTATAGCTCAGTCCTGCCAGGTGGCCAACCTGCAGTCCCAGATTGACCAG
TTGCGGCTGGAGTACCGTCAGCTTCTCCGCCAGAAGCAGCAGCTAGTGCA
ACAATCCGCCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00114144-exon-Sc0000233-1564993656:412796..412998 | BlTCONS00114144-exon-Sc0000233-1564993656:412796..412998 | Branchiostoma lanceolatum | exon |
| BlTCONS00114144-exon-Sc0000233-1564993656:415558..415661 | BlTCONS00114144-exon-Sc0000233-1564993656:415558..415661 | Branchiostoma lanceolatum | exon |
| BlTCONS00114144-exon-Sc0000233-1564993656:415876..415970 | BlTCONS00114144-exon-Sc0000233-1564993656:415876..415970 | Branchiostoma lanceolatum | exon |
| BlTCONS00114144-exon-Sc0000233-1564993656:416758..416988 | BlTCONS00114144-exon-Sc0000233-1564993656:416758..416988 | Branchiostoma lanceolatum | exon |
| BlTCONS00114144-exon-Sc0000233-1564993656:417861..419357 | BlTCONS00114144-exon-Sc0000233-1564993656:417861..419357 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000233 | genome | Sc0000233:412796..419357 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF056001 |
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