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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000233:299274..307446+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00114137 ID=BlTCONS00114137|Name=BlTCONS00114137|organism=Branchiostoma lanceolatum|type=mRNA|length=8173bp|location=Sequence derived from alignment at Sc0000233:299274..307446+ (Branchiostoma lanceolatum)
CAGGGAAGTTTCCGGACTACCCAGATGAAGATGAGGGTGGCTCTGCCATG
ATCTTCAAGGAAAAAACACCAGAAGAGGTGAGGAGAGAGAGAGAAAGTTT
GGTGAACGTAGATTTTCCGCCCGTCAATACATTTCTGAAGCATAAGCTGT
GAATTGTACCATTGTCTGTATGTTCCATTTTGAAAGGCATCAACGCTACT
GCAAATTGATAATCAATGTGTTAGAAGACTTCAGAAATGTGTTTAGCACT
TCCCCTAGCCACCATGTTCTGGAAGTATGACCTTTGTTAGACTGAATTTG
TTTCTTCACTCAGATATTCTAGAATGCACTGATTCCCAGAACACCTACAA
ACTATTCTATCTCACACTTTTTTTTTTGGATAAACTTTTCATTTTCAACA
TTTATCAACATTTATCTACCATATCGTCTGTATATTGATTTTTTTGTAGA
AACATGTTCTTCTTCTGTCATCAGATATTAAGAAATGACCAAAAAATGTT
TTTTTATTTTATTTTCTGTAGGTTGAAGCTGAGATGGCTGCCAAGGCTGA
AGAAAAGGGCAAGAAAAAGGGCAAGAAGGGGAAGAAGGGAAAGAAGTCAG
GGAAAAAGGACAAAAAAGGGAAAAAAGGAAAGAAAGGGAAAAAGGGGAAA
AAAGGAGGAGACGACGAAGAGGTATTACATGATTCTTTATTTGTTTTCTG
CATGAAATTAATATCATAATGAAATAAAACAAAATTAGATGAATATTAAA
AACATTATATCACTCAGTCTTTTGTTCAGAATTGAGTGTCGCAAAGAGAA
ATGTTTAGATTTCTTAAAACTTTATACATCCACTTTTAAAGTCACAAGTG
ATGCATAGAAATTGACCTTTGTTTACCAGTTTTCTTGAGAAAATTGTAAG
TAAGTCTGAATTCTAAAGATGTGTCACTTTGTTCAGTCCTATATTGCATC
TAGAGGATCTTCCAAGCAAGAGGTAATGATTAGATGGCTTTCATAATGTG
ATGTCAATTGTGATGTTTTTATATTCCAGAACAATAAACGTTAATATGTA
GAAGATGGTGATAGTTTCATTCCCAACCTCTGTACAATCCTTAGTGGTTT
GTAACTTGAACTTTTAGGAGTACATGTACATCTAGCCTTATGTTTCATTA
AGGAAAAGTAAAAAACAGAACAATCAAATACAAAAGAAAAATGGTGTTAA
ATTCCATGTTTTCATTGCCCTGTTAGGAAGAGGAACCAGGCTTCAAGTTG
GCCCCGTCTGAGTTTGTTCCAAGTCTTGCTGAGGGAAACACCCAGTATCA
TGGTGAGTTCATATGCCAAGTTCTGATAGGCTATAGTACCTCTGTCCTTG
GTGCTGATTGGCTACCAATGCCTCTTTTGCTAAATATGATTAGTGTTTTC
ACTCATTACACTGCTTGGCCTATGTGATCCCTGTCCTTGGTGCTGATTGG
TCAATGTATTCAGTTGCATATCATCATGACTGTTAATACCTCTGTCCTTG
GTGCTGATTGGTTGTCAATGCTTCAGCTGATTTGTTTTCTGTTGATTGCA
CTGATTGGCAAAGGTCATCGCTGTCCTTGGTGCTGATTGGTTATTGCATT
TGTATTCATATTCTGATTGGTTGAAACATTATGACTCTCATCATTTTCCC
ACAGGTGTGTGGAAGGAGCGCGATGAGGCGGATAACTTCAGCCAGAAGCA
CGACGCCGAGCTGATCAAGGAGGACAAACGGAAGGAAGTTGAAGGGGAGG
TCCGTCTCCAAGTGGACGAACTGATGAGGGAGGAGCTAAAGAACCTCAAA
GCTGTGAGTGACAGCTCTGTCAGACTATACTTATTCTATGTATTTCCAGT
TGATTTGATTACCGTAATTCTTCTAATAAAGGACGCACCCCAAATAAAGT
GCGCACCCCCGATTTGGGCTTCACCGCAACCCCAATCACGCCAGCTGAGA
TACTTCACAGAAAAACCTTAATAAAGTGCGCACCCCCGATCTGCCGCCGT
CGCTCGGCGCGTGTCTCCAAGATGTGACCACGCCCCGGTATTCGGCACGC
TATGAAGTCCTGGTGTCTTTCTTAATCGTTCCATTTTCAAGGAATTTTCG
GGAAAACATTACCATTATTTGGGGTCAACACTTAACCCTCTACTCCGCTC
AAATTTTGAGTAAAAAGTTTTGAAGTTTAAACGTCACGCTGAGAACCTCG
CGCCAGGATATCTGACAAACTTCCTTGATATTGAAGGACCAGACGACGAT
CCGCTTGATTTCTACCGGGCTAGTCAAAGACAAACGTGTAAAACGCATTT
TGAGATAAAATAAAAGTTCGTCTCTCGGCATTTATGCCGCAAAATACAGC
GTTGCATTGACAAATCATTTCATTTCGCCGATCCCCCGCCGCCATATTGT
TTAAATTCTGCTGCCCCAAGATGCATTTCGCGTGTTACGTAATCCTCATC
ACATGATCGCTTTACGCGTCTCTGATTGGTTGTTGCTGTAGCTAAAGGCG
GGAATTTTGCAGACGAAGTGCATCATGGGGCAGCAGAATCGCGGTTCAAG
TTTTTTCTTTGTCTGAAATGTTACACATGAAAACGCAATAAAAACGCGGT
TTTATCGACTACATACCAACATTATGGTGAAGAAAATGCAAAACTAAAAG
ATGTTTTCGGGAAAGCATACATTTATTTGCGGATTGATGGTGGCTTTTGC
GTAATTTTAGCGATCAACGAACCCGGAAGTGTACCGAAAGCGGCGTGGGT
TTTCGCGTTTTATCCGTCAAAACAAAAACAAAACTCCCGCTGAAGCGAAC
TCTGGAACATTTCAGATTCTAGCTATTACGTTTTTGATAAATAATATCTA
CAGATACGCACGATGTGCCCATATTTGCAGCCGTGTGGGTGGTTAGGAAA
TTATTGACGTCGCAAGCGGCGTAGTACAAACGGCGTGGGGTACGAAATTA
TGGCCGGCCCGACACACTGAAATAGTCGCGCGGTTGAAAACACCCAGCGT
TATTTGGTGTCTCATAATTTGATATTTAATATCGCTAAATCAATTATTTT
TATATCTAGAATACCTTTTCAAAAATATACGTATGATGTAGCATCGTTAT
CTTGTAAACATAAGAACATGAATAAGAACAGAACATGCATAAATTATCGT
TGCGTGTCGGCGAAGTGACGGGGCTAGCCTGCTGGGGTAATAATCGGTGA
CTTCCTGACTTACGTCGCGACTTTTCTCGAGAGAAAACCTAAATAAAGTG
CGCACCCCGACTTTGGCTTTGACCTGAAGCCTCATCTTGAAGGTTGAAAT
GTCAAAAAAGTGCGTCCTTTATTAGAAGAAATACGGTATATGGATTTACC
TCCTCTCGGAACCCCCAAATTGATGCGAGTGTGCAAATAAAAAAAAAGTT
TGGGAAAAGAAAAAGTTGCCTTCAATATGAAATCTACGTGGTAAGGAAGA
ATGAACAAAACTTAACACACAGAGTGTGGTATACTGGGTAATACATTCTT
CATTTTTGTTCTTTCACATCTTTTCACACGAATGAAAATTGATGCGCGCA
CAGATGTCATCCATATCATCAAATCAACATGGCCTAATACACCCGAAAAA
GAATATCTTTGAAACATTTGGTGTTATTTCTTTTACCAGTTGCTTTATTT
ATGTCATGGTCTTCAATATCAATCTTTCAATGTTATGAGATTAGGTCCTT
TTTTTAGAATTCTAACTCTAAATCAAACTCCATTTTCCAGGCTGTGGAAA
GAGATAAGGGGAAGAAGGGAAAGAAAGGAAAGAAGAGTGGAAAAAAGAAG
GTAAGCTACAGTCTTCTATTCTTCAATGTCAATGTTTATCGTACATTTGT
TTGAAATGGCTGAATCTAAAAGAAAACCTGTGAGCTTCTATTGTTCTTAA
AGAAGACTTTGCCAATAGTAGTTACTCAGGCAACTGGATAAAATTTTGAA
ATACATGTAGAAAGTTTTCAAAATCTTTAAGATTTAGGAAATTTTTAAAT
CACGAATTTTTAAAATTTTAGAAATTTTTAACATTTTAAACATTTTTAGA
ATTTTTAACATTTAAAAAAATTTAAAAACTTACTACATGCCTTTCAAAAT
TTTATCCAGTTGATTGAGTAACTATTTTTGGCATATCTTACATTGTATTA
CCTGTCTAACCTTCATTGTAATAGTTACTTTGATAATGTGAATATGTATT
TCTGTTTTTAATACTCCAATGCTTAATGTGTTCTTCCATTTTGATACAAG
CTGCGTAAAAGGAGTAGAAGTAGAAGTAGGAACTCGTATGACATGTTTAT
CGGTAGTGCCGTTAAGAAGAGGAGGAAGTCACCGGTAATGTGTCGTCAAT
ATATCCTCCTATCACCACTTTGCTCACTGCACAGAGAAATAGGCATTTAA
AAATAGGCCTGTTCACGATTCAAACTGCTCATGCACAGTGAGATGCATTG
TGGGTAATATGTCAAAGGTGAAGGCCCCTAATTTGTAAACGGTTCTTGTC
AAGACCACGCTTAACACATGTCCAAACATGTTATGTCTCAGGGGCCTGTG
ATTTTGACATATTATACACAATACATGTACAGTTCAATCCGTGAACAGGG
TTATAGGGTGAGATAGAACATACTGTAAATGCATTTTTAAAAGATCGCAG
GGTTTTTATTTCGCGCTAAGGTGAAAATGGCATGTTTGCGGCGGTTTCAA
GTTCGCGATGAAACGGTAGCCGCGAAAACCGTGAACATTTTTGCATTTAC
AGTTACTGTAGTAGCACATAAAATGACTAGGTGTAACAGACCGTTCGGTG
TAATATGACCAGCTGCTGCCGCGCCGCGTGCCTGCGAAGCTGGTGTGTTA
CGCCTAATGGCGGTTATACCGGCTATATAGATACAGATACATAATAAAAT
TTGCCAAAAATGCCCATGGATGTTTCATAACATTTTGACACTGTACACTA
CAAAACAACATGTAGTTTTTACAAACTGGCACAGTCACTGTGTTTGGCAG
CAATGTAGCCTATTTTAGTTCACTACCAAAGCACTGTGCAAAATACCTTG
CTGTATGGTGTTATGTAACCATATATATGTATACACTATTTTTTTAGGCA
TCAAAACCCCCTCCAGTTGTTGACTTCTACAGCAGTTTCAGCGTAAATAA
TTCAGAGTGAAAGTGTTGAAAAACCATTGGAATTTGTACATAAGAGAGGC
ACATGTGCCACATACACTAGAAGTTAAAACTTGCACGGTACTATTTTCAC
AGTGTATTTTGCAGAGTGATAATTTTGTGATGTACAGTAACTTTAGCAGG
GAATTCTTTGCACAGCATTATGAATTGTTCCAACTCACAATATTTCACAA
TGCTGTTGAGTACACTGATTGGCTAGTGTCATCCCTGTCCTTGGTGCTGA
TTGGTTTATGCATTTGATTTCATACACTGATTGGCTAAAACTGCACACAA
GTGAAAAACTACAGTATTAACACCTATGACAAGAGTTGTCTCCCAGCATA
TGTCAATAATTGTATTTCCTCGTCTTCCTTTAACAGAAGAAGAAGGGAAA
GAAGAGCGGGAAGAAAGGCAAGAAGGGGAAGAAGGAGAAGGATCTCACTG
CCGACAGGTAAGGTTCATGTCAAAACAGTCAGATCTAAACATCTTACTTT
TATCTGTTTGTTTAGCAAAGCTCCTGTACTTTACACCCATACCTAAATGT
GATGCTTTTCCCATATTCTGACATCAAATAATTTTAGTTGCATAAGTTCT
CAATATCTACCTATCTTCTAGTTTATTTTATTCTTTCTCTCTCCATTTTT
CGGTGATAAATGTCAACTTCAAGTCCCAAGACTCATCCATATTCTACTAT
TTCCTTCTCTCCTTCCCTTTTTATTAGATCATGAGCATTCCTCAGTTCCT
AAACTCGTTTGTTATTTTACTCTTCTATCACTTTCTTCCTAATAGTGTTT
GTCCAGATTAAAAACTCCATTCCATTGTACTTGCTTACTGTAAATGCAGA
AATGTTCGCAGTTGTCTTTTGTTAGCAGTTTTTGGTCTTTGACGCGAACT
TAGATTAAACCACCGCAATATTTTTCGCCCATCTACCCCCTTTGTCTATT
TATTGTTACAAACGCGAACTTAAAACCACCGTGAACACTCCGTTTTCTCC
CTACCACGAAATTAAGACAACGCAAACTTAAATGCATTTACAGTATCTTC
CCTCCCTTAATTCCTTCTCTTTATTGTTTTTGTACCCAGGACTATTGAGT
CCCTGTATGAAGAGTTAGTACAGGAGGGGATACTGGTCAGGTGTCCAAAG
GTACACATGTCTGACTACCTGGGAGAGTACAGCTACCTAGGCACCACGCT
ACGCACCGCTAACATCGAACCCATGCCGTCCCTACACGACGTCCGCAGGG
TCGTCACGGAGTACGGGATCCTTCCGCTAGGTGGGCGACAGTTTGTTTTT
GTAGTACTTTAGCCTGGGCACTATGTTCTTAAATGCCAGCTATTGTGATA
CTGAAAATAAAAAGAATAGATAAATGTGTTCTTAGTCTGGAAACAAAGAC
AAATAAAAAAGGATTTGGTTATGCACACATCCCTGTCCTTGGTGCTGATT
GAACTACAATTCAACCATTGTAGTTCCATATGTCCCCGTGGCGCAAGCAA
TAGCGCAATCCCGCTGCTTCGCCATCTGGATCAAATTCCGCGGATCCTTG
AGCCCGCGTTCGATCCTAGGGGTCGACTCGAGCTTGGACATGTTGTGAGG
GATTGCATTCGTCATTTCGGATGGTGACATAAAGCCGGCGGCCCCGTGTA
TGAGGGAGCTTCGGGCGTAAGCCTCAAGCGTCAAACCTCTGCACGTAAAA
GAACCCAACACACTTGTTGAGAAGAATAGGGGTGACCTGATGTGCTTGGC
CGTGGCAAAGCCGCATTGCACTACCACTAGCTACTTAAAAAAGCATCATG
CTTCACCTCAGTTGAGGATGACTGCTTTACCTTTAGTTCCGATATCTCAA
GAAGGAAATCAAGACACAGAATGTGATGTGTTACCTGTCGGGAAACAAAC
CAGAAAGGATTTGGACATGCCCAAATCCCTGTCCTTGGTGCTGATTTGTT
AGTGCATTTAACCTTTGTCATGCTAAGCTAGCCATCTGGCACCAAATCTG
TATTGGTTATGGGATTGAAGCAGCAGGGAGAAGGTTAATTAGCCAAACCT
TGAAAAATGGAGATATCAGAATTTTTTCAAAAAGCCATCTAAGATAAGAT
GTGCACAACCAAAAGTAGTAGTACTAGACTGAATAAAAGTTCTACACAGG
AACTACGCGGCTTCAGATGTTTTACTGAGGAACAACTGCGGTGTGAAAGA
TGTCGGTTAGCTTGAGGAATGAATCCACTCTACAATATAATGTGCACAAC
CAAAAGTTATGGAATTAGCATTTCTTTCTGTATGATTGATAATCATCTAT
TTATCATTTACTCATAATACTGGCTACATGTATCCCACCAGGTTCTCAGG
CTGTCCACGAGAAGGCTCCGCTGGTCAAGTCTGTCCTGCTGACCGGTCCG
AGGGGGACGGGGAAGAAGATGCTCGTCCACGCCATGTGTACGGAAACCGG
CGCAAACCTGTTCGACCTGACCTGTACCAACATCGCAGGAAAGTACCCAG
GAAAGAGCGGCCTGGCCATGATGATGCACATGGTCTTCAAGGTGGGGCAG
CTTTCTTAAAGAAATCATCCTACTGTCACGTTTGCTTTCTTACCGATACA
TATTCTAAAAATGCTGTAACAGTCATTTTCTCTCTTCTATTTAGACACAG
AATTTCCCTGTCTTATGCAATATATGTGACGTCGGCGTGGCATAACGGTT
AGAGCGTTGGACTCAGAACCAATAAGTCTCGGGTTCAATACTCACCATGC
CCCGACGACGTGCCCTTGGGAAAGGCACTTTACACGACCTTCCCTGACGG
TGGAGTGACGCCCAACGAGCCAATTGGGCTAATATGTGTGCGAAAAGCAC
ACTAGCCAACATCTGCACATCGACATCCACCAAGAGCCGTTAAAAAGTTG
TTTTTTCTACAATATCTAATGTATTTATGATGAATCAGTTGCCGATTGAA
GAGCCGTTTTGTTGTTCTTGTTTCCAGGTTGCCCGGCAGTTGCAGCCATC
TGTCATCTTCATTGGAGACGCTG Coding sequence (CDS) from alignment at Sc0000233:299274..307446+ >BlTCONS00114137 ID=BlTCONS00114137|Name=BlTCONS00114137|organism=Branchiostoma lanceolatum|type=CDS|length=600bp|location=Sequence derived from alignment at Sc0000233:299274..307446+ (Branchiostoma lanceolatum)
GGGAAGTTTCCGGACTACCCAGATGAAGATGAGGGTGGCTCTGCCATGAT
CTTCAAGGAAAAAACACCAGAAGAGGTTGAAGCTGAGATGGCTGCCAAGG
CTGAAGAAAAGGGCAAGAAAAAGGGCAAGAAGGGGAAGAAGGAGAAGGAT
CTCACTGCCGACAGGACTATTGAGTCCCTGTATGAAGAGTTAGTACAGGA
GGGGATACTGGTCAGGTGTCCAAAGGTACACATGTCTGACTACCTGGGAG
AGTACAGCTACCTAGGCACCACGCTACGCACCGCTAACATCGAACCCATG
CCGTCCCTACACGACGTCCGCAGGGTCGTCACGGAGTACGGGATCCTTCC
GCTAGGTTCTCAGGCTGTCCACGAGAAGGCTCCGCTGGTCAAGTCTGTCC
TGCTGACCGGTCCGAGGGGGACGGGGAAGAAGATGCTCGTCCACGCCATG
TGTACGGAAACCGGCGCAAACCTGTTCGACCTGACCTGTACCAACATCGC
AGGAAAGTACCCAGGAAAGAGCGGCCTGGCCATGATGATGCACATGGTCT
TCAAGGTTGCCCGGCAGTTGCAGCCATCTGTCATCTTCATTGGAGACGCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00114137-exon-Sc0000233-1564993656:299274..299350 | BlTCONS00114137-exon-Sc0000233-1564993656:299274..299350 | Branchiostoma lanceolatum | exon |
| BlTCONS00114137-exon-Sc0000233-1564993656:299795..299843 | BlTCONS00114137-exon-Sc0000233-1564993656:299795..299843 | Branchiostoma lanceolatum | exon |
| BlTCONS00114137-exon-Sc0000233-1564993656:304841..304880 | BlTCONS00114137-exon-Sc0000233-1564993656:304841..304880 | Branchiostoma lanceolatum | exon |
| BlTCONS00114137-exon-Sc0000233-1564993656:305513..305703 | BlTCONS00114137-exon-Sc0000233-1564993656:305513..305703 | Branchiostoma lanceolatum | exon |
| BlTCONS00114137-exon-Sc0000233-1564993656:306765..306964 | BlTCONS00114137-exon-Sc0000233-1564993656:306765..306964 | Branchiostoma lanceolatum | exon |
| BlTCONS00114137-exon-Sc0000233-1564993656:307401..307446 | BlTCONS00114137-exon-Sc0000233-1564993656:307401..307446 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000233 | genome | Sc0000233:299274..307446 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055998 |
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