BlTCONS00114129 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00114129
Unique NameBlTCONS00114129
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000233:263157..264326+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00114129 ID=BlTCONS00114129|Name=BlTCONS00114129|organism=Branchiostoma lanceolatum|type=mRNA|length=1170bp|location=Sequence derived from alignment at Sc0000233:263157..264326+ (Branchiostoma lanceolatum)
CCAAAACTGACGCTTTGGTTGCTACGCTGTGTTATTTCCTTGCAATATCT CCATGTTTACTTGCGGCACAGAGTTCCTCGACCCTCCAAGACACAAAAGC CATTCCAGACACTTTAAAGAATGTTAAAGATGACATTCTGGAGATAACGT TGGAGGATGGTTCCGTTTCTTTTGAAACGAAGTTGGCGGGAACGAACCCG GAAGCAGATGGACCACCTGTTGCAGGTGCCTCAGATTCACCTGCAAGACC GAGTGCATTGCCAGGTGTCGAAGAAGGTGAGAGTACTTCATTTACATTTA GTTCATAAACTTTATAAACCTACTCTGTTAAACCTTTGTGGTATACATTT ACTTCAAAAGACGCTTTGAATATTGGTTTTCAGAAAGCAGAGTAAAAGGG ATTTTATGATATAGATTATGATAGAATGACTATTACGGTTTACTCATTAA AGGCAATCAAAGCAATATTAGGGACCAAAAAATGGAGATTAAAAAAAAAG GCTGAAATCTTTATTGTAGTGACATTTACTAACACTGACTGTCTAGCACA TTTGTGTAATAACTTCATACTTTGAGCATTTTAAGTTAAAAACATGCAAA AACATGCCATACGATGATCCCCCTACAAAAACCCTGGCGACGATTTTCAG TGAGTTCTCACATTACAACAAAGTCATATTTTTGCATAATGGACGTCACT ATACATTGTGATAGTGTTGTTTGAACTTATCATGTATAGAAATGACTAAA TAAATTGACTTTCAAAATCCGATTTTCGAGCCCACAGCAATTTTATTGAT TACACTGAATCATATAAAAATGTATATCAACATCAAAATACACCTATATA GGTTCCTTAGATTATAGGAATAAGTATACCATTGAAACACTTCACGAGTG ATGTTGATATTAAGCTTCATCTAAGTATTGAAACACAAACGTTACATTCT TGCTCTTTTTCCATTTCAGATGTCCCTACAGATACGACTGAAGCATCAAC ATCTTCCCAAATGCTGTCGGATATAAAGGAGCTAACAGCCTCAGACTACG ACTCTCTGATAACAAACGCCTTCTCCCAACCTGCCTGCATCTTATTCTCG TCCCAGAGAAGGGGAGCATCGGTCATCGAAAAACTTTTCCTCCAAGTGTG GGCGACCTTGGAAGCACGGG

Coding sequence (CDS) from alignment at Sc0000233:263157..264326+

>BlTCONS00114129 ID=BlTCONS00114129|Name=BlTCONS00114129|organism=Branchiostoma lanceolatum|type=CDS|length=474bp|location=Sequence derived from alignment at Sc0000233:263157..264326+ (Branchiostoma lanceolatum)
AAAACTGACGCTTTGGTTGCTACGCTGTGTTATTTCCTTGCAATATCTCC
ATGTTTACTTGCGGCACAGAGTTCCTCGACCCTCCAAGACACAAAAGCCA
TTCCAGACACTTTAAAGAATGTTAAAGATGACATTCTGGAGATAACGTTG
GAGGATGGTTCCGTTTCTTTTGAAACGAAGTTGGCGGGAACGAACCCGGA
AGCAGATGGACCACCTGTTGCAGGTGCCTCAGATTCACCTGCAAGACCGA
GTGCATTGCCAGGTGTCGAAGAAGATGTCCCTACAGATACGACTGAAGCA
TCAACATCTTCCCAAATGCTGTCGGATATAAAGGAGCTAACAGCCTCAGA
CTACGACTCTCTGATAACAAACGCCTTCTCCCAACCTGCCTGCATCTTAT
TCTCGTCCCAGAGAAGGGGAGCATCGGTCATCGAAAAACTTTTCCTCCAA
GTGTGGGCGACCTTGGAAGCACGG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00114129-exon-Sc0000233-1564993656:263157..263432BlTCONS00114129-exon-Sc0000233-1564993656:263157..263432Branchiostoma lanceolatumexon
BlTCONS00114129-exon-Sc0000233-1564993656:264126..264326BlTCONS00114129-exon-Sc0000233-1564993656:264126..264326Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00114129BlTCONS00114129-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000233genomeSc0000233:263157..264326 +
Properties
Property NameValue
GeneIDBlCUFF055992