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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000233:176012..181766+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00114127 ID=BlTCONS00114127|Name=BlTCONS00114127|organism=Branchiostoma lanceolatum|type=mRNA|length=5755bp|location=Sequence derived from alignment at Sc0000233:176012..181766+ (Branchiostoma lanceolatum)
CTGTTGGCTACAGTAAGTTTGAGCAATCTGTGGGCTTTCTCATAATCCTC
GGTCCTCTTCAAGAGATGCAGCAAGCTAAGTTTTCTCTCCAGAACTGCTT
GTCGTTCATTGCAGAGAGAAGTTCATGTCCTTCTAAATTAGTTTCAGTTT
CTTAAGTGTTGTGATTGGTCGACCAATCCTTCTCTTTGTGTCTGGGTTCC
AGCTGGTTCTCTACTCGCTCATTCTCATGTAAATGTACACATTTTGTAAC
TTCCGTTACCGTTTGAAGTAAGACGTTCCTGACATTAAGATATGCCACAT
ATAAGGTGCCAAACTGTCGTTTTTATGACGACTTAAAACTTTTCTGGCTT
TTAAAAACGACAGTTTGGCACCTTATATGTGGCATATCTTAATGTCAGAA
ACATCTTACTTTAAACGGTAACGGAAGTTACAAAATGTGTAAATTATAAA
GAGAACGAGCATAGTACGTACCACGTGAACCGTGAGACTCATCCGGCAAC
GTTTCACTACCGTCTTTGTATAACAAATTTTGTCTAAGACTCTTCTATTT
TTTCTGTTTTGATGTGTGTGGATTTTAATACTAGAGCATACCAAGTTTGT
GCACCCTTACATACATGTGTGTAGATAACTATCATACATGTAGATATACA
AAAGATTTAGGCCTAGAGTAAGCCTGTGTTACAGCATCTACATGTATAGC
TATCAGGCTACTAAGGGGTCTGGCCATTTAGCTGGGCCACTAGGAGCATG
ATCTAGTCAGGCTAGGCTTTGAGTGTGTTTCTCTCTTGGAATAAATGCCT
CTGTATTTTTTTCCACAGAGTCTCAGGAAATCCCAGTGTGTAAGTTCTTC
CGGCCAGGGTCTCAGTGTTGGAAAGGAGACAACTGTTCCTACCTGCACCT
GCAAGATCGGGATGTTAAAGGTACAAAAACTCTTAGACGTATACCGTGTG
TTGTCCTCTGGTTTAAAGTTCTATTGGTTTACTAGTATTTAGTGCAGACA
GGAGTATTTTGTATGCCTTCAAATACCATTCCATCCATGAATTACTCCCA
AGAAATGCATCCTTCCATTCAAGGAAATTTTGCTTGCTACATTCACATCT
CTAGCTTCAGATGAAATAGGATACCAACGTCTTGAAAATGTCAATTGTAC
CTTCCAGTCACAGAGAAAAGGACAGTTATGTGCTCCAACCACATGGTCGA
CCTGCCGCCAGTACACACCCTGGTTGCTGTAGAGGTGACGTCTGTCTTCA
ACCCAGGGCATTTCTTTGTACAGTTTACATATGGAGGAGTGCCACATGAT
GAACTCCTAGACATGGGTACATTCTGTTCTGTTTCTCGCACAGTCAAACC
TGTACAAGTGACCACCTCTACATAAGGACTACCTTGCAAATGTGACTTTT
GGGTAGTCCCTTATGTAATTTTTGCCATTCACTAAAGTACAAAAAATCCT
CTCTATAGTGACCACCTGTCCACATAGACCAGATTTTATTGATCCCTGTG
TGGTCTTCTTAGGCAGTTTTGACTGCACGTGTGTATCAAGAGCTACAGGT
AAACAGATGTGCAAAAACCATATTTGGATACCTTTTACACATCATGTGGA
CAATCACATATATAGGTTGTGTGTTTTCTGTAATTGTATCTGTGATTTTA
GCATCTGTTTAAGACCATATGCAAATATTTATGTAATAATCTACAGGATG
ATAAAATAGTAATGATAAAAGTATACACAAGAAATGTTTTATACCACAAA
CTAACAAAGGGTATAATTTAATGTTTTTGTGTTTTATGACAGTAATGTTA
CTAATAAAGCTTCTCTTATCTTACTAGCTGCAGATGGTATTGATGTTGAC
AAACCCAACCCCCTGGATGAGCTTAGTAAGGAGATAAAGTGAGTTGCTAT
TCTGATACTGTATGTTTTTGGTTTATACTGGAAAATGAAAATGACATGCT
GATGTGGAATGCTGATGAGGGTAGCAAGGGACAAGATACTGTAATTCTTG
TTTCTTTCACTGTAACTTTATGTTCACAGTTTTCACGGTCACCTCTGTAT
TGTGAAAAACCTGTTGTAATGATATATGATTCCTTCACACATCCGTTCTG
TGAATCACTAGCCGCCACCGTGAAATTAAAGTGAAAATGTCCATTTTCCT
TCCACCGTGAGATTTTGCTACCGTGAAGATAAAGTGAATTACAGTACTGT
AATATATGCAAACAAGCTGTTTCATGAAACAAGACATTGCAACAAAATTT
TCACAACCCTCTGCTTACAATTGTTTGTAGCAAGTCTTTGATGAATGCTA
TGTCAGTTGTAATAGGCAATTTATCCCCTTCTATAGCTACATGGAAAATA
CTTAGCACTTTTCACATACATCAAATACATGTGCATCTTTTGAAATGTCT
GTCAGTGTCATTAAAATGTACATGGTGTTATTACGTTGTATTGATCACAT
TCCTAGCCAATGTACAATGAATTGCATATACTGTAAATGCAGAAATGTTC
GCGGTGGCTTTTTATTCGCGTTTTTCACGGTGAACCACCGCAAAACGTTT
AGCCAGCCTATGACTGTAGCGCTACTATTGTTTCGAACGCGAACTTTAAA
CCACCGCGAACACTCCATTTTCTCCCTACTGCGAAATAAAAACCATGCGA
ACTTCAATACATTTACAGTACTTGCGGTCAATTTGCCATTATAATGTTGC
AATGATAACAATGTTTCCAACCTTACAGTGACCACTACTCCAAGAAGGTG
TACAGTGATAGGGAGGTGGGCATAGATCTCGCACTTGGAGAGATCGTCAT
CGCAAAGTACAGTCAGGACAATCAGTTCTACCGTGCAAGGATTACTGGTG
TGGACACAGAAACCCAAGAAGTATGGGTGAGTACTACATCCATAACTCTG
CAAGATAGGAATTTGAATAGAGCTTTTGTTACCGTATTACAGTCGCTTAC
ATTTTGTCCTTTTGAAAACATGCCATATATAGTATATGAACAAATAAACT
GTTCTCCAACTTTTAAAAAATTGTCCTATGTACATTTTGTAATTGTTGCA
CTACCCAGATGTTTCTTTGTTCTGGTTCACCACAACAAAGTTGCTTTGTA
TTGTCCATGTACATTGTACTTTACATGCACTATGGAATTCTGGTGATTCA
GTGAAAACTGTATAGGTGTTGATTTAATTTCTTGTTTTCTAGAAGCTAAT
TTGTTTTTGGTAGTCTTATTAGGTGTGGGTAACACAATTGTCAATTAGAG
TATGGAATTGTCAATAAGGGTATTTGAAATATTAAAGTTTATTGTTTCAG
AAAATGACAGTACAATGAATATCAATCTTTCTTTGAAACATTTGACTGTA
CATGTAATAAGGTGCAGTAATGCTGGCATGTAGTTAGTGGCTGAGGAGAT
AGGGGGCATCATTGCATCATGTACATTAGAGACCATAGGTTACTTAGTAC
AACTAATACTGTCAATGACCTGATGTGCTTGCCTGAAAACGCAAGCATAG
GTACAGCTTCTTTCCACAATAGGTCAATCAAAAAACATCATATTTCACCT
CAATATAACATGACTGCCTTACCTTACCATTTTCAGGTGTTCTATGTTGA
TTACGGCAACAAGGAGAGGGTGAGAGAGTCGGACATCCATCAGATTGAAG
CCAGGTTCTGCCAGTTGCCCTTCCAGGCGGTGGAGTGCTACCTGGCCAAC
ATAGAACCCCTCCCCACAGACCAGGGCAAGCCAAGGTGGTCCAAAGCAGC
CAGGTGGGGCATAGACATAGGGTGTTTGCACTTCTGTGACTTTAACATGA
GAATTGTCTGCTGTGCTAGATAGTTAAACCTGGAAGATACCAGGTAAAGT
TTTAGACAAATGTACATATGACCCTGTCCCTGGTGCTAATCAATGTTCAG
GAAGTGACAGACCTGTTTCTAGTACGGATCAGTGTTTATGAACAAACAGA
CCTGTCCTTGGTGCTGATCAGTGTTCATGAACTGACAGACCTGTTTCTAC
CACTGATCAGTGTTATTAAATTGACAGACCTGTCCTTGGTACTGCTCAGC
AGTCAGAATCAAAAAGACCTGTCCCTAGTGTTGATCAGTGTTCAGAAACG
AACAGACCTGTCCTTGGTGCTGATCAGTGTTCATTAATCAACAGACCTGT
CCCTGGTGTTGATCAGTGTTCAGAAACAAACAGACCTGTCCTTGGAGCTG
ATAAGTGTTCAGGAACAAAAAGACCTGTCCTTGGTGCTGATTAGTGCTCA
CAAATAGACCTGTCCCTGGTGCTGATCAGTGTTCACAAACAGACTTGTCC
TAGTGCTGGTCAGTGCTCATTAGCAAACAGACCTGTCCTTGGTGCTGATC
AGTGCTCTTAAACTAACATACCTGTTTCTAGGGGCTGATCAGTGTTAATG
AACNCTGTCCTTGGTGCTGATCAGTGCCCTTAAACTAACATACCTGTTTC
TAGGGGCTGATCAGTGTTAATGAACTGACAGACCTGTCCCTCGGGCTGGT
CAGTGTTCACAAAACAGACCTGTCCTTTGTGCTGATAAGTATTTACCAAC
AGACCTGTCCTTGGTACTGAATGCCATCCTCTTACATTTATAAGATTTGA
AGAGCCCTGTTACCTAGCAGATTGTTACGCTGTTCTTCAACACTTAGGTC
TAACATGTCTTGAACATTATTTCTTGAAAAATATCCATTATTATCTCCAT
GTTACAGGGACGTCTTTATTGACCTAACTGGAGGTAAAGTCCTGATTGCT
CATGTTCTCTCCAGGTGAGTCCACAATATTGTAAATCAATTACTGTAATT
CTTGTTTCTTTCACTGTAACTTTATGTTCCCTGTTTTCACGGTCACCTCT
GTACCGTTAACTTATCATCACTGTGAAAAACCTGTTGTAATCATTTATGA
TTCCTTCACACATCCGTTCTGTAAATCACTTGCCACCACCATGTAGTTGA
AGTTCAGTGAAAATGTCCATTTTCTTTACACCGTGAAATTTTGCTGCCTT
GAAGATAACATGAATTACAGTACATGTCAGAAAGTACATAAACATTATTA
TAATATTTAAGAAAAAAACGTAATACAGACTACACTCATCTACATGTAGT
TTCAGACATATGTAATAGAGCAATGGAATATACATAATTGACTATTTCTG
AGTACTTTATTTTTTTCTAGAATTTCTTTTTATTAAAGGGAGAATGCAAA
GCTAGTGAAATGCTTTGTGTGTAACCATTGAATGGACACCACCTTTATTG
AGTATTTGTAATACATATACATCCCAGTAACTAACCAATGTTTGAACATT
CCACAGAGGCTGGAATGACACCCTGTATGTGGCACTGTTCGACACTAGCA
CCGAAGCAGACACTAGGATTGACTACACCCTGGTGAAGGCAGGGCTGGCT
CGCAGAGTCAATATCTACAACGAGCAGTCCGTACAGGAAAGAATGATGAG
ACATAGGGAGGGCCTAGCACCCGGTTAGGTTAGGCACTACTGGTCATGCT
TGACAGTTTGTTTGCACGTACGGACTTTTGTTTTCTAACACACCTTATGA
TATGTAAGGTTTTAAAGACTTTCTATTTTGTTCGATGACGTTTTATGAGA
TACTGGCTGACACAAAGGTTACTTGCTGTGCATTGGGGCCTTTATGTTTA
GCCATAGTAGTATGCTTAGATCATGAATGCTCTATTGTGTTGGAAACTAT
GCGCATGTAAGTACATATACAGTGGGAGTTGATGCTACAGCATACCATGT
AGAGC Coding sequence (CDS) from alignment at Sc0000233:176012..181766+ >BlTCONS00114127 ID=BlTCONS00114127|Name=BlTCONS00114127|organism=Branchiostoma lanceolatum|type=CDS|length=870bp|location=Sequence derived from alignment at Sc0000233:176012..181766+ (Branchiostoma lanceolatum)
GTTGGCTACAAGTCTCAGGAAATCCCAGTGTGTAAGTTCTTCCGGCCAGG
GTCTCAGTGTTGGAAAGGAGACAACTGTTCCTACCTGCACCTGCAAGATC
GGGATGTTAAAGTCACAGAGAAAAGGACAGTTATGTGCTCCAACCACATG
GTCGACCTGCCGCCAGTACACACCCTGGTTGCTGTAGAGGTGACGTCTGT
CTTCAACCCAGGGCATTTCTTTGTACAGTTTACATATGGAGGAGTGCCAC
ATGATGAACTCCTAGACATGGCTGCAGATGGTATTGATGTTGACAAACCC
AACCCCCTGGATGAGCTTAGTAAGGAGATAAATGACCACTACTCCAAGAA
GGTGTACAGTGATAGGGAGGTGGGCATAGATCTCGCACTTGGAGAGATCG
TCATCGCAAAGTACAGTCAGGACAATCAGTTCTACCGTGCAAGGATTACT
GGTGTGGACACAGAAACCCAAGAAGTGTTCTATGTTGATTACGGCAACAA
GGAGAGGGTGAGAGAGTCGGACATCCATCAGATTGAAGCCAGGTTCTGCC
AGTTGCCCTTCCAGGCGGTGGAGTGCTACCTGGCCAACATAGAACCCCTC
CCCACAGACCAGGGCAAGCCAAGGTGGTCCAAAGCAGCCAGGGACGTCTT
TATTGACCTAACTGGAGGTAAAGTCCTGATTGCTCATGTTCTCTCCAGAG
GCTGGAATGACACCCTGTATGTGGCACTGTTCGACACTAGCACCGAAGCA
GACACTAGGATTGACTACACCCTGGTGAAGGCAGGGCTGGCTCGCAGAGT
CAATATCTACAACGAGCAGTCCGTACAGGAAAGAATGATGAGACATAGGG
AGGGCCTAGCACCCGGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00114127-exon-Sc0000233-1564993656:176012..176023 | BlTCONS00114127-exon-Sc0000233-1564993656:176012..176023 | Branchiostoma lanceolatum | exon |
| BlTCONS00114127-exon-Sc0000233-1564993656:176830..176931 | BlTCONS00114127-exon-Sc0000233-1564993656:176830..176931 | Branchiostoma lanceolatum | exon |
| BlTCONS00114127-exon-Sc0000233-1564993656:177169..177327 | BlTCONS00114127-exon-Sc0000233-1564993656:177169..177327 | Branchiostoma lanceolatum | exon |
| BlTCONS00114127-exon-Sc0000233-1564993656:177839..177899 | BlTCONS00114127-exon-Sc0000233-1564993656:177839..177899 | Branchiostoma lanceolatum | exon |
| BlTCONS00114127-exon-Sc0000233-1564993656:178740..178881 | BlTCONS00114127-exon-Sc0000233-1564993656:178740..178881 | Branchiostoma lanceolatum | exon |
| BlTCONS00114127-exon-Sc0000233-1564993656:179598..179764 | BlTCONS00114127-exon-Sc0000233-1564993656:179598..179764 | Branchiostoma lanceolatum | exon |
| BlTCONS00114127-exon-Sc0000233-1564993656:180719..180775 | BlTCONS00114127-exon-Sc0000233-1564993656:180719..180775 | Branchiostoma lanceolatum | exon |
| BlTCONS00114127-exon-Sc0000233-1564993656:181318..181766 | BlTCONS00114127-exon-Sc0000233-1564993656:181318..181766 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000233 | genome | Sc0000233:176012..181766 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055989 |
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