BlTCONS00114120 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00114120
Unique NameBlTCONS00114120
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000233:165994..167401+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00114120 ID=BlTCONS00114120|Name=BlTCONS00114120|organism=Branchiostoma lanceolatum|type=mRNA|length=1408bp|location=Sequence derived from alignment at Sc0000233:165994..167401+ (Branchiostoma lanceolatum)
TACGTTTCCTACTCGATACCAGCCATGGCTATGTCAAGAGGCCATCTTGC TGCAGGGAAGCAGCGACTGAAAGACAAGCTGAAAACAATTGACGAGTTGA AATCCCGTATTTTGCAGTATGTGACCAACCTTACTGAACAGGTAATATTG GTGATTCTATTTAACCTTCTTTCTACTGCCTAACTCTGTAACCAATAGGA AATTGGGTGCCAAATGGCTACTTCAGAGTGCTAAAGGTTAACAAATCTTG TTAAATTCCTGTATTCATACTATCATAGTCGTAGATGAACAGTTAGTATG GCCCCCTTAGGTCTTTTGTACTACTCTGGATTTTTATACCAATGGTACAT TTTACTTGGCATGGGCTAATAGATTTAACTGAATGTGATGTTTGTTGTTT AAGCCCACGGAGGCAGCTCTGCAGTTGCTAGAAGAGACAGACAGGGGGCG CTTCTTCGGGAAGTTCTCTTCAGTCAGCGAGGATCTAGAGAAGTGCCTGG ACACACTGTTTCTGCTCTGTGTATCTCTCAACAATGATGAAGGAGGTAAA CAAGATGATCTAGTGGCTGATCTTAAACATTTTTCCTGGTATTCATCCCC ATCTTAGCTCCATTCTGTTCACCTTATCCTTCCTCTGTAAAAGGAATATG GTCAATGGACTGGAGCTGAAATACGGATGAAAACCAGGCTGATTCGACCA TCTACATTGTCGGAGAAATTCTGACCTTAGAATTGATAACAAGATGATAA AGAATAATCATCCTAGCCTTAATAATGTTTTTCTGGTCTTTAATGACAAT GACAATGAACTTCATTGCATATTCATGCCCAACTTGGGCTCAATGCATTA GATAACATGAAGTAAAAGAAAAGGAACATTGTGATATACTCCATCTAAAT CTACAGAGTCTCTTCTCTCTTCTTGAAACATTTGTACACAAATTCGCATA GTTTTTAATGGGAATAGCATTAGAGATGATATTTCTTGTAAGGCCATTTA CTTATGACTCAATTGGTTTCTTTCCAAATATACCGCAGTAGATGAAGTTC GTGATTCCTGTCAAAGAAGTCTTTTTTTCTCCTTTTTTTCAGAAGGATGT GACTACCCTGTTTCAGAATTGTCAAGCAGTGAGTCATCAGAGTCCAGCAA TAGATCAAACCAGCAGCCACGCTTACCTGACAAGACAGAAGTTTCACCTG GCACTGCGTCTGAAGACACTGGTACTAAAAGACACAAAATAGAGCTCAAG GAAATGGCTTGTGAGGATGAATCTGGGTTCTCGTCTATTCAGATCGACTC AGAGTCAGACACTCTTCAAGAACAGACCTGCAAGAAAGATGAGTCTGTCA CCAGTTCCAGTTCCTCACATCAGTCCTCTCAGAGCTCACCTGATCAAACT GGTAGCAT

Coding sequence (CDS) from alignment at Sc0000233:165994..167401+

>BlTCONS00114120 ID=BlTCONS00114120|Name=BlTCONS00114120|organism=Branchiostoma lanceolatum|type=CDS|length=597bp|location=Sequence derived from alignment at Sc0000233:165994..167401+ (Branchiostoma lanceolatum)
TACGTTTCCTACTCGATACCAGCCATGGCTATGTCAAGAGGCCATCTTGC
TGCAGGGAAGCAGCGACTGAAAGACAAGCTGAAAACAATTGACGAGTTGA
AATCCCGTATTTTGCAGTATGTGACCAACCTTACTGAACAGCCCACGGAG
GCAGCTCTGCAGTTGCTAGAAGAGACAGACAGGGGGCGCTTCTTCGGGAA
GTTCTCTTCAGTCAGCGAGGATCTAGAGAAGTGCCTGGACACACTGTTTC
TGCTCTGTGTATCTCTCAACAATGATGAAGGAGAAGGATGTGACTACCCT
GTTTCAGAATTGTCAAGCAGTGAGTCATCAGAGTCCAGCAATAGATCAAA
CCAGCAGCCACGCTTACCTGACAAGACAGAAGTTTCACCTGGCACTGCGT
CTGAAGACACTGGTACTAAAAGACACAAAATAGAGCTCAAGGAAATGGCT
TGTGAGGATGAATCTGGGTTCTCGTCTATTCAGATCGACTCAGAGTCAGA
CACTCTTCAAGAACAGACCTGCAAGAAAGATGAGTCTGTCACCAGTTCCA
GTTCCTCACATCAGTCCTCTCAGAGCTCACCTGATCAAACTGGTAGC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00114120BlTCONS00114120-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00114120-exon-Sc0000233-1564993656:165994..166134BlTCONS00114120-exon-Sc0000233-1564993656:165994..166134Branchiostoma lanceolatumexon
BlTCONS00114120-exon-Sc0000233-1564993656:166397..166538BlTCONS00114120-exon-Sc0000233-1564993656:166397..166538Branchiostoma lanceolatumexon
BlTCONS00114120-exon-Sc0000233-1564993656:167086..167401BlTCONS00114120-exon-Sc0000233-1564993656:167086..167401Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000233genomeSc0000233:165994..167401 +
Properties
Property NameValue
GeneIDBlCUFF055985