BlTCONS00114054 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00114054
Unique NameBlTCONS00114054
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000232:372371..373491-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00114054 ID=BlTCONS00114054|Name=BlTCONS00114054|organism=Branchiostoma lanceolatum|type=mRNA|length=1121bp|location=Sequence derived from alignment at Sc0000232:372371..373491- (Branchiostoma lanceolatum)
GGGTACCGGAGATTGGAGGAATTGTACGAGAGGGACCCTAACGAGGTGAG
AGTAAAAAAAGAATTTTATGGCAACCTTTCAGTCTACAGGACACCACGGA
TTGAACTCACAGTCAGCATCAGTATCTGGAATTTTAATCAGTTTTTACCA
GCTATGCATATACTAGTTTTGGTCATTAAAAGCTATTCATAAACGTTACA
TATACGATGTGTGAAGCTGCGTAGCGCTACCGTACTTTATTAGACGCCAT
ATAACCTCATGTTTTAATTCTTATTCCAAATGACGAAATTCTGTATAAGA
ATAAAAACATTGTGATTGTATGTTCAAAATGGCAAGAGAAAGAGGAGAGC
GTCCAAGAAAACTATTGCTCTCCTTCCCCTATAGAGGAGTGTAATATTGA
TAGACTTCATTTATTGTTAGAAAGGAGGAAACTTGAAGATAATGCATACT
GTTAAAGGTCATACATATCTATATTCAGAAGTTTTTATTTAAACTTGCTA
CATTCACCTTTATATCAGATCGTCCTGACGTTGGTGGAGCGGACCAGCGG
GTGTAAGGAACTGCTAGACGAGACCACCATCAGAAAAGACCTGGTGGCTT
TACTACTCCGTGTTCTCGCACGAGCGTGCGACTGTTCTTCTTCTCCAGGT
AACCCACATTTTACCACCGGTCAATTTTCTAGTTGCTGAAACCTCATTCC
TATTGATAACATTTACCAGTGATATAATAAATCAATTATAGATTAATTTG
ATAGTAGTCTTATCCAAAACCTAGCAAGGCCAGTCTTGGTCGGTTGGCAA
GTCACATACATCTCAAGTTTTATTGTGTAATATAAAGGCTACACAAAAGA
AGTAATTCAATGTGATTATATTTTATGTCACAGCGAACACCATGAAGCTG
ATGGTGATGGTCCGTAACTCCGAGTTCCTTGCACGGGCACTTGCGACGTA
CTTCGCCGCAATTCCAGCGCAACCCTCCCGCCAGCAGCAGTTCCGAGAGT
CAATCAAACATGCAGTACGGTTGTTCCGTGAGCTCTTGGACAGGTCTCCC
AGTTCTTACTTGCAGGTTAGTTATTTTGCAGCCAACACTTATTAAGGTTT
TCGTGACCAAGCATTCTCATT

Coding sequence (CDS) from alignment at Sc0000232:372371..373491-

>BlTCONS00114054 ID=BlTCONS00114054|Name=BlTCONS00114054|organism=Branchiostoma lanceolatum|type=CDS|length=387bp|location=Sequence derived from alignment at Sc0000232:372371..373491- (Branchiostoma lanceolatum)
GGGTACCGGAGATTGGAGGAATTGTACGAGAGGGACCCTAACGAGATCGT
CCTGACGTTGGTGGAGCGGACCAGCGGGTGTAAGGAACTGCTAGACGAGA
CCACCATCAGAAAAGACCTGGTGGCTTTACTACTCCGTGTTCTCGCACGA
GCGTGCGACTGTTCTTCTTCTCCAGCGAACACCATGAAGCTGATGGTGAT
GGTCCGTAACTCCGAGTTCCTTGCACGGGCACTTGCGACGTACTTCGCCG
CAATTCCAGCGCAACCCTCCCGCCAGCAGCAGTTCCGAGAGTCAATCAAA
CATGCAGTACGGTTGTTCCGTGAGCTCTTGGACAGGTCTCCCAGTTCTTA
CTTGCAGGTTAGTTATTTTGCAGCCAACACTTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00114054BlTCONS00114054-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00114054-exon-Sc0000232-1564993656:373447..373491BlTCONS00114054-exon-Sc0000232-1564993656:373447..373491Branchiostoma lanceolatumexon
BlTCONS00114054-exon-Sc0000232-1564993656:372844..372973BlTCONS00114054-exon-Sc0000232-1564993656:372844..372973Branchiostoma lanceolatumexon
BlTCONS00114054-exon-Sc0000232-1564993656:372371..372608BlTCONS00114054-exon-Sc0000232-1564993656:372371..372608Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000232genomeSc0000232:372371..373491 -
Properties
Property NameValue
GeneIDBlCUFF055944