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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000232:192720..196260- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00114031 ID=BlTCONS00114031|Name=BlTCONS00114031|organism=Branchiostoma lanceolatum|type=mRNA|length=3541bp|location=Sequence derived from alignment at Sc0000232:192720..196260- (Branchiostoma lanceolatum)
CCGCGTTTGTGTGGCTCTTTCTCGAGCGAAGAAAGGTTTTTACGCCATAG
GTAACCTGACAATGCTGTCGCAGACTAGCATATTGTGGAGCAAGGTAACA
TACAAGTCAGTTTGTATACTCTTCAAATTCGTTTAAAACATTTTGACACG
TTGTCTGATGACTCTTAATATTCTGTCGTTTTCTTTCCAGATCATCCAAG
AACTGCGGGAGCAAAGCTGTGTGGGCAGGCACCTCATGCTGTGCTGCCAG
AACCACCCTGATACCATCATTATGGCGGACACTGAGAAAGACTTTGAAAA
GGCACCTAAAGGTGGCTGCATGAGGCCCTGTGATTTCAGGCAAGTAGACA
GATTTGTGCATCAACGAGTATACTCACTGGAATAGCAAATTCCCCGATCG
TATGCCTTTTTTCTGCTGCAAAAATCTACTATTATAAACAAAGTGGTATC
TTAATATCTGTTGATGTCATATTTCATGTCGGAAGCACAATCTTCTACAA
TAGATACCAACAATAGAATTGCACACATGTTGATAACGACAACGATTGTC
TTTCATATACAGGTTGACGTGTGGCCATGTCTGCGCAAGCATATGTCACC
CAATAGACCCCAAGCACAAGGAGTACAAATGCAAGAAGCCTTGTGTAAAT
GTCTTATGTGACCTCGGCCATAAGTGCCCTAAGATCTGCTATGAGACCTG
TGGCGACTGCCAGGTGCTTTTAGAAAAGACCATCCCCAAATGCCAACACA
AGCAGATGGTCCCATGCTTTACACCTCCATCTGAATTCATCTGCCGGATA
CCGTGTGAGAAGACCTTTCCCTGTAACCACACATGCAAGAACATGTGTGG
ACAGGAGTGCAGCATTCCCTGCATGATAGTGATAACGCATCAGCTAACTT
GTGGCCACACCATGAAGGCGGCCTGCTCGGCTAAAGAAGACGACCTAGTC
TGCATGAAGGAGATAAAACATCAGCTCACCTGCGGACACAACATCAAGGC
AGCCTGCTCGGCTAAAGAAGACGACCTAGTCTGCATGGAGGTGATAACAC
ATCAGCTCACCTGTGGCCATGCCATTCAGGCAGTCTGTTCGGCTAAAGAA
GACGACCTAGTCTGCATGGAGGTAATAACACGTCAGCTCAGCTGTGGACA
CAACATCCAGGCAGCCTGTTCGGCTAAAGAAGACGACCTAGTCTGCATGG
AAGTAATAGCACATCAGCTCACCTGTGAACACACCATTCATGCAGTCTGT
TCAGCTGAAGAGGACGACCTAGTCTGCATGGAGGTGGTAACACGTCAGCT
CACCTGTGGACACAACATCCAGGCAGCCTGTTCGGCTAAAGAAGACGACC
TAGTCTGCATGGAGGTGATAAAACGTCAGCTCACCTGTGGCCATAATATT
CAGGCGGCCTGCTCGGCTGAGGAAAACGATCTGGTTTGCAACGCTCCGTG
TCTACAGTTGCTGAAGTGTGATCACCCCTGTGCTGGAACATGCAGTAGTT
GCAAGCAAGGGGGGTTGCACCAACAGTGTACACATCCTTGTAAGCGTGTG
CTCGTCTGCTCCCACCAGTGCACGGCTGCTTGTACACGGAGTTGCCCTCC
GTGCACCAAACCTTGTGAGAACCGCTGCATCCACAGCCGCTGCCGACACC
AGTACGGAAGGCCATGCGTGCCGTGCCAAAAGCCCTGTCAGTGGAGATGT
AGACATCACAAGTGTGACAAGCCCTGTGGTGAACCTTGCGACCGTCCTCG
GTGTGACCACCCTTGCCGGAAGACCCAACGCTGTGGCAAGTGCAAGAAAG
ACCAGCCATGCATCGGTATGTGTGGGGAACCATGTCCGGACAAGTGTCGC
GTTTGTGATAGTGAAGAGTTGACCAAAATCCTCTTCGGTATGGAAGACAA
AGACGACGCCCATTTCGTCCAGCTGGAGGACTGCGGTCACGTAATAGAAG
TCAGCGGGCTGGACCAGTGGATGGACACCACCGACAGAAAAATCCAACTC
CAAACCTGCCCAAAATGCAAGACACCAGTACGACACAACCTACGCTACGG
TAACACTATCAAGAACACGCTGGCAATGATCGAGAAGGTTAAGAAGAAGT
GGCACGACGACGTTCAAATGGCAAAGACAGAAGCCACCGCTGATAAGCTT
ATGAGAAAGCTCCGAGATGCGGACGAGGAAAGATATTGCGCAGAGACCTC
AAAGGATCTCCTTCGGCAAATGAAACGCAATCGACTGTACTCATTGGACG
AGGCGGCCATGTATGAAAACAAAGCCCTGTTCCTGAAGAAACTTGCTGAA
CTTAAGAAAAAGAGGAGAAAGTATTTTCTCTCTGGCCATATAGTACTTCT
GGATTTCGAGGATATGAAGAAGGAGGTCGAAGAGATGGAAAAGTGGCTGC
GTCGCCGAACAGCCCGTGTGGGGGAACATGTAAGGCCAGAATTATTTTAC
TGCAGTCGGCTAAACTAAACATAATCAAATAAATCTAAGTGCACAGTGTC
CGGTTAGATTTGATAAGTTCGCAATTCGCAAAGGGGCGCAGTTCATATAT
TCCAATAATCTGATCATCTGAGCTTCGCAAAGGCGGCGCAACTTAGCTCG
ATTTGGCACAGTCCCGTGAGATATAGTGCTCGCTTAAGTCACTCGGTACT
CTTCTGTTCACAGGAGTGGGAGGAGTTTGGGCGAGAGATGACTCGACTGA
ACTTTCTCCTAAAGCTCCGCGTCCTACAGGAAGAGATTCGGAAGAAGGGA
ATCAACCTGGACGACCAGGCAAAGGAGAGTCTCGTCCTAGTGAAACGCAG
GTTGACAGACCTTAAACCTTTCAATGCGATTAGAGAGGAACTGGTGAAAC
ACGTTATGAAGAATATAGAAGCGCTTATGCCTGAACTAAGCCTAGCCCTG
CTCAACGTCTGCGATGAGGAGCCAGTTCAAGTGGTGAAGGCCAATGGACT
GACCCAGGGACACTGGTGCGCATGTCGCAACGGACATGTGTACGCTATTG
AAGACATTGGAAGAACCACGATGGTAAACATTGATTTGCATATCTTTGGC
ATATATCTTAAGCATATCGAAATATTTGGCATCTTCTTTGGTAAAAAAAC
ATTATTACAGTATATCAGGGTTTTACTCCGTAAAAAAGTTCACAATCTCT
TTCAACTGTTCTCGACAGGAAAGCCCTTGCCCGGAGTGTCATGCTGAAAT
CGAAGAAGTTCGCCACAGGGGATGTCAGTCGCAGGCTTCGGTCGGACAAC
CGTCTGGCACCAGAGAAGGACGGAGCGAGGCACGCCGTGTAGTCCGACCA
GATAAGGCCACCTTGAAGAAAAGAAAGTCTATGGCTTGAATTTCGACGGC
TAGGTGACATAGGCTTGTTAATCTAAACATTACAATTAAACAACAAGTAT
GCTTTATTCCCTACCGTTTAAAACAGATTGATGGAAAAATCAACTAACCA
GTGTGTTTTATTACCTAGAAAGTGTTGCTTATTAACTAGTGTAATTCATC
AACTAGTGTGATTTATTAGTCTGACAATGGATGCCGTGAAC Coding sequence (CDS) from alignment at Sc0000232:192720..196260- >BlTCONS00114031 ID=BlTCONS00114031|Name=BlTCONS00114031|organism=Branchiostoma lanceolatum|type=CDS|length=2640bp|location=Sequence derived from alignment at Sc0000232:192720..196260- (Branchiostoma lanceolatum)
CGCGTTTGTGTGGCTCTTTCTCGAGCGAAGAAAGGTTTTTACGCCATAGG
TAACCTGACAATGCTGTCGCAGACTAGCATATTGTGGAGCAAGATCATCC
AAGAACTGCGGGAGCAAAGCTGTGTGGGCAGGCACCTCATGCTGTGCTGC
CAGAACCACCCTGATACCATCATTATGGCGGACACTGAGAAAGACTTTGA
AAAGGCACCTAAAGGTGGCTGCATGAGGCCCTGTGATTTCAGGTTGACGT
GTGGCCATGTCTGCGCAAGCATATGTCACCCAATAGACCCCAAGCACAAG
GAGTACAAATGCAAGAAGCCTTGTGTAAATGTCTTATGTGACCTCGGCCA
TAAGTGCCCTAAGATCTGCTATGAGACCTGTGGCGACTGCCAGGTGCTTT
TAGAAAAGACCATCCCCAAATGCCAACACAAGCAGATGGTCCCATGCTTT
ACACCTCCATCTGAATTCATCTGCCGGATACCGTGTGAGAAGACCTTTCC
CTGTAACCACACATGCAAGAACATGTGTGGACAGGAGTGCAGCATTCCCT
GCATGATAGTGATAACGCATCAGCTAACTTGTGGCCACACCATGAAGGCG
GCCTGCTCGGCTAAAGAAGACGACCTAGTCTGCATGAAGGAGATAAAACA
TCAGCTCACCTGCGGACACAACATCAAGGCAGCCTGCTCGGCTAAAGAAG
ACGACCTAGTCTGCATGGAGGTGATAACACATCAGCTCACCTGTGGCCAT
GCCATTCAGGCAGTCTGTTCGGCTAAAGAAGACGACCTAGTCTGCATGGA
GGTAATAACACGTCAGCTCAGCTGTGGACACAACATCCAGGCAGCCTGTT
CGGCTAAAGAAGACGACCTAGTCTGCATGGAAGTAATAGCACATCAGCTC
ACCTGTGAACACACCATTCATGCAGTCTGTTCAGCTGAAGAGGACGACCT
AGTCTGCATGGAGGTGGTAACACGTCAGCTCACCTGTGGACACAACATCC
AGGCAGCCTGTTCGGCTAAAGAAGACGACCTAGTCTGCATGGAGGTGATA
AAACGTCAGCTCACCTGTGGCCATAATATTCAGGCGGCCTGCTCGGCTGA
GGAAAACGATCTGGTTTGCAACGCTCCGTGTCTACAGTTGCTGAAGTGTG
ATCACCCCTGTGCTGGAACATGCAGTAGTTGCAAGCAAGGGGGGTTGCAC
CAACAGTGTACACATCCTTGTAAGCGTGTGCTCGTCTGCTCCCACCAGTG
CACGGCTGCTTGTACACGGAGTTGCCCTCCGTGCACCAAACCTTGTGAGA
ACCGCTGCATCCACAGCCGCTGCCGACACCAGTACGGAAGGCCATGCGTG
CCGTGCCAAAAGCCCTGTCAGTGGAGATGTAGACATCACAAGTGTGACAA
GCCCTGTGGTGAACCTTGCGACCGTCCTCGGTGTGACCACCCTTGCCGGA
AGACCCAACGCTGTGGCAAGTGCAAGAAAGACCAGCCATGCATCGGTATG
TGTGGGGAACCATGTCCGGACAAGTGTCGCGTTTGTGATAGTGAAGAGTT
GACCAAAATCCTCTTCGGTATGGAAGACAAAGACGACGCCCATTTCGTCC
AGCTGGAGGACTGCGGTCACGTAATAGAAGTCAGCGGGCTGGACCAGTGG
ATGGACACCACCGACAGAAAAATCCAACTCCAAACCTGCCCAAAATGCAA
GACACCAGTACGACACAACCTACGCTACGGTAACACTATCAAGAACACGC
TGGCAATGATCGAGAAGGTTAAGAAGAAGTGGCACGACGACGTTCAAATG
GCAAAGACAGAAGCCACCGCTGATAAGCTTATGAGAAAGCTCCGAGATGC
GGACGAGGAAAGATATTGCGCAGAGACCTCAAAGGATCTCCTTCGGCAAA
TGAAACGCAATCGACTGTACTCATTGGACGAGGCGGCCATGTATGAAAAC
AAAGCCCTGTTCCTGAAGAAACTTGCTGAACTTAAGAAAAAGAGGAGAAA
GTATTTTCTCTCTGGCCATATAGTACTTCTGGATTTCGAGGATATGAAGA
AGGAGGTCGAAGAGATGGAAAAGTGGCTGCGTCGCCGAACAGCCCGTGTG
GGGGAACAGGAGTGGGAGGAGTTTGGGCGAGAGATGACTCGACTGAACTT
TCTCCTAAAGCTCCGCGTCCTACAGGAAGAGATTCGGAAGAAGGGAATCA
ACCTGGACGACCAGGCAAAGGAGAGTCTCGTCCTAGTGAAACGCAGGTTG
ACAGACCTTAAACCTTTCAATGCGATTAGAGAGGAACTGGTGAAACACGT
TATGAAGAATATAGAAGCGCTTATGCCTGAACTAAGCCTAGCCCTGCTCA
ACGTCTGCGATGAGGAGCCAGTTCAAGTGGTGAAGGCCAATGGACTGACC
CAGGGACACTGGTGCGCATGTCGCAACGGACATGTGTACGCTATTGAAGA
CATTGGAAGAACCACGATGGAAAGCCCTTGCCCGGAGTGTCATGCTGAAA
TCGAAGAAGTTCGCCACAGGGGATGTCAGTCGCAGGCTTCGGTCGGACAA
CCGTCTGGCACCAGAGAAGGACGGAGCGAGGCACGCCGTGTAGTCCGACC
AGATAAGGCCACCTTGAAGAAAAGAAAGTCTATGGCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00114031-exon-Sc0000232-1564993656:196167..196260 | BlTCONS00114031-exon-Sc0000232-1564993656:196167..196260 | Branchiostoma lanceolatum | exon |
| BlTCONS00114031-exon-Sc0000232-1564993656:195922..196070 | BlTCONS00114031-exon-Sc0000232-1564993656:195922..196070 | Branchiostoma lanceolatum | exon |
| BlTCONS00114031-exon-Sc0000232-1564993656:193834..195698 | BlTCONS00114031-exon-Sc0000232-1564993656:193834..195698 | Branchiostoma lanceolatum | exon |
| BlTCONS00114031-exon-Sc0000232-1564993656:193238..193599 | BlTCONS00114031-exon-Sc0000232-1564993656:193238..193599 | Branchiostoma lanceolatum | exon |
| BlTCONS00114031-exon-Sc0000232-1564993656:192720..193092 | BlTCONS00114031-exon-Sc0000232-1564993656:192720..193092 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000232 | genome | Sc0000232:192720..196260 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055921 |
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