BlTCONS00113994 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113994
Unique NameBlTCONS00113994
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000232:243167..245110+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113994 ID=BlTCONS00113994|Name=BlTCONS00113994|organism=Branchiostoma lanceolatum|type=mRNA|length=1944bp|location=Sequence derived from alignment at Sc0000232:243167..245110+ (Branchiostoma lanceolatum)
GTTCAAAGTTCTACCCTCCGCCGCGGGGATTTCCTGTTTGGCAGTTGTAG CCCAGCGTATGTATAAACAATAGTAGTAACAAAAAACTGCACGTCTGTTT TTCTTCTCTTTCATTCTCCCCATAACTGACGAAGTAATTCTATACTCCCA TGTTCATATACCCAAGAACCACTGTTGATTTGCTCTGGTTGATTTGTTTA CCCAAGGATTGGTTTACGTAACATTGAGTATATATTTTACTATAAGCATC CCCGAACGAACTAGCGACGTGGTACGCAGGCTACAACAAACCGTGCATTT TGTAACTATTCTTTGTCATAACTTTCAGGTCTTCAAACGACGGCTACCTT GCTGACACTGAAGGTCAGCATAGTCCCCAAGGGCCGTATAGCCCCTGGTA TGACCCCGGATACACAGCCGACATCGACAGCAGCGTGGGAAGTGGCATTT TGGACGACCTGAAAATTCGAAACATGGGCTCCCCATCCCCCTTTTCCGAC TATTCCTGTCCATCATCAACAACGTCATCACCGGCACACAACTCGATTCA AACTTCTAACAACTCACCTGCATGTGCAGACGCCTCGACTGAGAGCTGTA CTGAACGTCACACTCCTGGAGGGCAACTGATTCACAACTCACCTGCACGA TCCGACTCCGAGTCAGACGCCTCTAAAGAGAGCTCCCTACTACTGGGCGG TGGGAGACCCACAGGATGGACAGCGGTGGACTGGGAAGATGGACAGCGAT GGACTGGGAGTGAGTCTGACCACTCTGAGACTTGGGAAAATGGACAGCGA TGGACTGGGAGTGAGTCTGACCACTCCGAGACTTGGAACAATAATGACCC CCCTACATTCCAGCACCCAGGGCCCCAGAAGAGGAAACTGCATGCAAGCC ACAACCACAACTACACAGAACAGACCTCAGCCAGTAAGAGGCCCAAACCA GATGACCTGAACATGTCAGACAGCCAGACTATATGGCCTGAGGCATCCCG GATGCATTTGTACTTCAAATAAACATCAGTTCTATGTACATTTATATCTC TCTTGTGCTTATTGTTTTCTTTATATTCATAAGTCAATTCTAGCTGAAGA AGTTATACCACTATTTAGTTTCAAGAAGTAATGGTCTCAACATTGAAAGA AATAGTAACAAAGGCAGTTCACTTGTCCACATACTTATATTGTTTGACAC AATGAAGTTTGACTCTTATAAAGCTTCCAGATGATACAATGAATTCCTTC ACATGGACATTATTGTACATGTATGTGCTGTCAAAAATCGAACAAGTGGT ATGCTGACAGAGAAGCAGATAAGTCTTTTCTTTTTAAACAAAACTATGTT TCGTATGTTGAAAACATCACATACTAAGTTTCTTCTAGAAGACCTTTCGA TATATACATATGTGAAAAAAATACAAGCCTATCCTCTTCTAAGTTTCTTC TAGAAGACCTTTGGGTACATACATGCCATGTTAAAAAATAAAATAAAAAC AAATACAATCCTATCCTAGTGTACAGTATCTACATGGTCATAGCAGACCC AATATTGTCAACTAAGTTGTACAATGACAGAGAAGTATCTATGTCATAAG TCTGTCAACATCTCATATGGTGTTCCTGATGTATGTGTTACAATTCCAGT ACAAATCACACTATTAAAGTTTCTTCTAGAAGACCTTTGGGTACATACAG GCCATGTTAGAAAAAATAAAATAAAAACAAATACAAGCCTATCCTAGTGT ACAGTATCTACATGGTCATCAAACCCAATGTTATTGTCAAGCAAGTCGTA CAATGACAGAAGTATCTATGTCATCTCATATGGTGTTCCTGATGTGCATG TTACAATTCAACTACATATCAAATTCAAGTTCCACAACAAAATTCAATTC AATACAGTACAATAAAAAAGTGAGTTTTGAAAAATAATACTATT

Coding sequence (CDS) from alignment at Sc0000232:243167..245110+

>BlTCONS00113994 ID=BlTCONS00113994|Name=BlTCONS00113994|organism=Branchiostoma lanceolatum|type=CDS|length=750bp|location=Sequence derived from alignment at Sc0000232:243167..245110+ (Branchiostoma lanceolatum)
GTTCAAAGTTCTACCCTCCGCCGCGGGGATTTCCTGTTTGGCAGTTGTAG
CCCAGCGTCTTCAAACGACGGCTACCTTGCTGACACTGAAGGTCAGCATA
GTCCCCAAGGGCCGTATAGCCCCTGGTATGACCCCGGATACACAGCCGAC
ATCGACAGCAGCGTGGGAAGTGGCATTTTGGACGACCTGAAAATTCGAAA
CATGGGCTCCCCATCCCCCTTTTCCGACTATTCCTGTCCATCATCAACAA
CGTCATCACCGGCACACAACTCGATTCAAACTTCTAACAACTCACCTGCA
TGTGCAGACGCCTCGACTGAGAGCTGTACTGAACGTCACACTCCTGGAGG
GCAACTGATTCACAACTCACCTGCACGATCCGACTCCGAGTCAGACGCCT
CTAAAGAGAGCTCCCTACTACTGGGCGGTGGGAGACCCACAGGATGGACA
GCGGTGGACTGGGAAGATGGACAGCGATGGACTGGGAGTGAGTCTGACCA
CTCTGAGACTTGGGAAAATGGACAGCGATGGACTGGGAGTGAGTCTGACC
ACTCCGAGACTTGGAACAATAATGACCCCCCTACATTCCAGCACCCAGGG
CCCCAGAAGAGGAAACTGCATGCAAGCCACAACCACAACTACACAGAACA
GACCTCAGCCAGTAAGAGGCCCAAACCAGATGACCTGAACATGTCAGACA
GCCAGACTATATGGCCTGAGGCATCCCGGATGCATTTGTACTTCAAATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113994-exon-Sc0000232-1564993656:243167..243222BlTCONS00113994-exon-Sc0000232-1564993656:243167..243222Branchiostoma lanceolatumexon
BlTCONS00113994-exon-Sc0000232-1564993656:243495..245110BlTCONS00113994-exon-Sc0000232-1564993656:243495..245110Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113994BlTCONS00113994-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000232genomeSc0000232:243167..245110 +
Properties
Property NameValue
GeneIDBlCUFF055886