|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000232:242106..245110+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113992 ID=BlTCONS00113992|Name=BlTCONS00113992|organism=Branchiostoma lanceolatum|type=mRNA|length=3005bp|location=Sequence derived from alignment at Sc0000232:242106..245110+ (Branchiostoma lanceolatum)
CATTAAGGCGGCTGGTAAGCCTCCCGGGACGTTGGATCGAGGTCGCGAGG
GTCGGTCCCTTTCCAACGCTGTAACATATATATTATGCATCCAATCTTAA
TGAAACTTACACATAACGTACAGAAACGTGTGTAGATTGTATAAATGGCG
GTGTTTTTTCGGAGGAAGAGAAAAATTATAGCAATAATGCAGCTCAAAGT
GATACTTCCGGTTTGGTGGGCCGCTTTTTTTTTGGCCCGTTTTTTTTACG
TAAAATGGCCAAATCCTGCAAATATCAAGGTCTCAATAAACTGTTGACAC
CCTGGCTAATGGGAAATCTGAAATAGTTTTCCCATATGTAGTTCATTTTA
AGAGTATAATCAAGAAATAAGCTTATTTTCCTCCCAAAATTGCGGCATCG
CTTACGGCCATGGCGGACTCCCTACCCAAAAAGCACTCCATAATCCCCAT
GAAGAAGGCATGCTGCTACCACGTGGTACCCCCAAATATGGCATATCACG
ACCATAGCCGAAGAAAAGAGAGTCACAAAAAAGAGTTTGGGTTGGTCCCG
AGGTCTGCCGATGTTAAATATATGCATATATGCATGCCTTGGCGTGATCC
AGCCGTCCCCGGTGGGGGTTCCCTGCTGGGGCATGCTGGTGTTTGCTTAC
AGGGTCGGCAGGTTCAGGCGCCAATCAGAAGCAAGCATATAGAAACCGCG
GGAATCAGTGCCAGCTGAACCCCTGGCCAGGGTTTTATTTTGCAGGGTGT
TTGGGAATTCGCGCAAAGCTGAAAAATGTGAGTTATTTTAGAACATAATC
AGTGACTATTTGTATAAATTAACTGTTTGTCATTTTGTAGTGGAATGTCT
AGTGTGCATTGTATCGAAGCTTCAAACTTGTAAAGGCGCACGTAGCACTT
ACGGAACGATGTGGTATAATTTCTCCAAGCAGATATTTCGATAAGGGGGC
CATGACCACCCCTGCTTCAGAAGGGAACGCTTGAAGCATGTTAAATCTAA
TCACTTTGACACATAATGGTCAATTTGTAAGGAAGTGCGAAGTCTTTACC
AGGGCTAAACTGTTCAAAGTTCTACCCTCCGCCGCGGGGATTTCCTGTTT
GGCAGTTGTAGCCCAGCGTATGTATAAACAATAGTAGTAACAAAAAACTG
CACGTCTGTTTTTCTTCTCTTTCATTCTCCCCATAACTGACGAAGTAATT
CTATACTCCCATGTTCATATACCCAAGAACCACTGTTGATTTGCTCTGGT
TGATTTGTTTACCCAAGGATTGGTTTACGTAACATTGAGTATATATTTTA
CTATAAGCATCCCCGAACGAACTAGCGACGTGGTACGCAGGCTACAACAA
ACCGTGCATTTTGTAACTATTCTTTGTCATAACTTTCAGGTCTTCAAACG
ACGGCTACCTTGCTGACACTGAAGGTCAGCATAGTCCCCAAGGGCCGTAT
AGCCCCTGGTATGACCCCGGATACACAGCCGACATCGACAGCAGCGTGGG
AAGTGGCATTTTGGACGACCTGAAAATTCGAAACATGGGCTCCCCATCCC
CCTTTTCCGACTATTCCTGTCCATCATCAACAACGTCATCACCGGCACAC
AACTCGATTCAAACTTCTAACAACTCACCTGCATGTGCAGACGCCTCGAC
TGAGAGCTGTACTGAACGTCACACTCCTGGAGGGCAACTGATTCACAACT
CACCTGCACGATCCGACTCCGAGTCAGACGCCTCTAAAGAGAGCTCCCTA
CTACTGGGCGGTGGGAGACCCACAGGATGGACAGCGGTGGACTGGGAAGA
TGGACAGCGATGGACTGGGAGTGAGTCTGACCACTCTGAGACTTGGGAAA
ATGGACAGCGATGGACTGGGAGTGAGTCTGACCACTCCGAGACTTGGAAC
AATAATGACCCCCCTACATTCCAGCACCCAGGGCCCCAGAAGAGGAAACT
GCATGCAAGCCACAACCACAACTACACAGAACAGACCTCAGCCAGTAAGA
GGCCCAAACCAGATGACCTGAACATGTCAGACAGCCAGACTATATGGCCT
GAGGCATCCCGGATGCATTTGTACTTCAAATAAACATCAGTTCTATGTAC
ATTTATATCTCTCTTGTGCTTATTGTTTTCTTTATATTCATAAGTCAATT
CTAGCTGAAGAAGTTATACCACTATTTAGTTTCAAGAAGTAATGGTCTCA
ACATTGAAAGAAATAGTAACAAAGGCAGTTCACTTGTCCACATACTTATA
TTGTTTGACACAATGAAGTTTGACTCTTATAAAGCTTCCAGATGATACAA
TGAATTCCTTCACATGGACATTATTGTACATGTATGTGCTGTCAAAAATC
GAACAAGTGGTATGCTGACAGAGAAGCAGATAAGTCTTTTCTTTTTAAAC
AAAACTATGTTTCGTATGTTGAAAACATCACATACTAAGTTTCTTCTAGA
AGACCTTTCGATATATACATATGTGAAAAAAATACAAGCCTATCCTCTTC
TAAGTTTCTTCTAGAAGACCTTTGGGTACATACATGCCATGTTAAAAAAT
AAAATAAAAACAAATACAATCCTATCCTAGTGTACAGTATCTACATGGTC
ATAGCAGACCCAATATTGTCAACTAAGTTGTACAATGACAGAGAAGTATC
TATGTCATAAGTCTGTCAACATCTCATATGGTGTTCCTGATGTATGTGTT
ACAATTCCAGTACAAATCACACTATTAAAGTTTCTTCTAGAAGACCTTTG
GGTACATACAGGCCATGTTAGAAAAAATAAAATAAAAACAAATACAAGCC
TATCCTAGTGTACAGTATCTACATGGTCATCAAACCCAATGTTATTGTCA
AGCAAGTCGTACAATGACAGAAGTATCTATGTCATCTCATATGGTGTTCC
TGATGTGCATGTTACAATTCAACTACATATCAAATTCAAGTTCCACAACA
AAATTCAATTCAATACAGTACAATAAAAAAGTGAGTTTTGAAAAATAATA
CTATT Coding sequence (CDS) from alignment at Sc0000232:242106..245110+ >BlTCONS00113992 ID=BlTCONS00113992|Name=BlTCONS00113992|organism=Branchiostoma lanceolatum|type=CDS|length=549bp|location=Sequence derived from alignment at Sc0000232:242106..245110+ (Branchiostoma lanceolatum)
ATGGGCTCCCCATCCCCCTTTTCCGACTATTCCTGTCCATCATCAACAAC
GTCATCACCGGCACACAACTCGATTCAAACTTCTAACAACTCACCTGCAT
GTGCAGACGCCTCGACTGAGAGCTGTACTGAACGTCACACTCCTGGAGGG
CAACTGATTCACAACTCACCTGCACGATCCGACTCCGAGTCAGACGCCTC
TAAAGAGAGCTCCCTACTACTGGGCGGTGGGAGACCCACAGGATGGACAG
CGGTGGACTGGGAAGATGGACAGCGATGGACTGGGAGTGAGTCTGACCAC
TCTGAGACTTGGGAAAATGGACAGCGATGGACTGGGAGTGAGTCTGACCA
CTCCGAGACTTGGAACAATAATGACCCCCCTACATTCCAGCACCCAGGGC
CCCAGAAGAGGAAACTGCATGCAAGCCACAACCACAACTACACAGAACAG
ACCTCAGCCAGTAAGAGGCCCAAACCAGATGACCTGAACATGTCAGACAG
CCAGACTATATGGCCTGAGGCATCCCGGATGCATTTGTACTTCAAATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113992-exon-Sc0000232-1564993656:242106..245110 | BlTCONS00113992-exon-Sc0000232-1564993656:242106..245110 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000232 | genome | Sc0000232:242106..245110 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055886 |
|
