BlTCONS00113989 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113989
Unique NameBlTCONS00113989
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000232:212793..214676+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113989 ID=BlTCONS00113989|Name=BlTCONS00113989|organism=Branchiostoma lanceolatum|type=mRNA|length=1884bp|location=Sequence derived from alignment at Sc0000232:212793..214676+ (Branchiostoma lanceolatum)
ATCTCAGGTCTTTCTTTGAATGTAGATAAATGCAAAATATTACGATTAGG TCCCTTAAAATCCACGAATTTTCGTTTGCCCACTCATCTACCGATACAGT GGGTTGACGGGGATGTTGACCTACTGGGTATCAATATTCCCGTTGATTTA AATTTAATTACAAGTGTTAATTTCGAACCCCGATTGGAGAGATTAGATAG ACTATTGCGACCTATGAAGAATAAATATCTGTCCCTGTATGGTAAAATTG TTATTATTAACACTTTGGTGGTTCCCCAATTTACAAATCTATTTCAAGTC TTACCATCCCCTAACGATTCCTTTTTCAAAGTATATGAAAAGAANTTATT ATTAACACCTTGGTGGTTCCCCAATTTACAAATCTATTTCAAGTCTTACC ATCCCCTAACGATTCCTTTTTCAAAGTATATGAAAAGAAGATATTTTCTT TTATTTGGGACAACGGTCCTGAACGAGTTGCACGGAGGGTTTTATACAAT ACATCGGAAAATGGAGGACTAAACTTAAAAAACTTACGCGCGTTCAACAC TTCTATAAAAGCTTCATGGGTACCTAAACTTTATTCTCATCCCGAATGGT TTTCCTCCTGGGTAACAGTCTTCCATCCTCAACTTAATCATAGTTTATTT CCTTTTTACCAGCTGTCCTCGGTGATAAACCTTTGTTTAAAAGGATTTTT TTCTGAAGTTTTTATGTCCTGGTTTCAATTTCAGTACGTAGAGCCCACGA CGCCGGCAAATATACGACAACAAGTAATTTGTTTAAACTCTAATATTATT ATTGATGGTAAAACTGTTTGTTTGACAGCTTTTATGAATAGGAATATATA TTTCATAAATGACTTGCTGTCCCCGGACGGCAATTTTATGTCTTATGATG AATTCAGTACAAATTTCCCAAATGCTTGTGACCAACATAGATATCTACAG CTTATTTCAGCTATTCCCGGTAAATGGAAAAAACTACTTAGTACTGAGAA GCGTAAAGACCTTGTGTGCCTGCCCTTTCAAAAAAATTATAAATGGTTAC GAAATATAAAAATCAATAAAAGCATGTATATCTACTTTCTTACGTCCATG AACGAGGTCAGCCTTGCACACAATACTAGACTTTCTTGGTTCTATTATTT TGACAAACCTATACCATGGCGAGATGTATTTACAAACTTATATAGATGTA CTATTGATCCAAGTACTAGATATTTTCAATACCGATTAATTAATGAATTT TTACCTTGTAAAAAAATTCTACATATATGGAAATTAATAGACTCTAGCTC TTGTTCTTTCTGTCATGACGATGTAGAATCCTATATTCATATTTTCTGGG AGTGTCCGCATGTAGTATCATTTTGGAACGATGTAAAAAATTGGTTGAAA GTAGAAACTTCTATAGAGTGCTACCTAAATTCCTTTATTATCATATTTGG AGATACATGTAACGATGCGCCCCCCCTGAAAAATTTGATTATTTTGTTAG GTAAAGTTTTCATCTTCCGGTGTAGACGCTTAAAAATAATAAACTTCCAG GCCTTTAAAAGACTAATATCTACTTTTGAAAAAACTGAACGTCTCATTGC ATCTCGGAGAGGGAAGCTGGAGAAGCATCGGGGTAAGTGGGGAACTTTGT GTTTAATTTGATTTTGAAATGTAGAAATAATCATGAAAGAATATAGAAAT GACATGATAATGATATTTGATTACAATACTGAAATGATTATGCGAGTAAT GATACAATGCTTATATGAAAAGATGATATGTAATGTGATAAAATGATATG TAATGATTTCATAACCAATATGAATAACGTTAGTAATGACATAATAATAA TCATATTATATGAGCTGTTAAGTTTACAATGTGG

Coding sequence (CDS) from alignment at Sc0000232:212793..214676+

>BlTCONS00113989 ID=BlTCONS00113989|Name=BlTCONS00113989|organism=Branchiostoma lanceolatum|type=CDS|length=948bp|location=Sequence derived from alignment at Sc0000232:212793..214676+ (Branchiostoma lanceolatum)
ATGTCCTGGTTTCAATTTCAGTACGTAGAGCCCACGACGCCGGCAAATAT
ACGACAACAAGTAATTTGTTTAAACTCTAATATTATTATTGATGGTAAAA
CTGTTTGTTTGACAGCTTTTATGAATAGGAATATATATTTCATAAATGAC
TTGCTGTCCCCGGACGGCAATTTTATGTCTTATGATGAATTCAGTACAAA
TTTCCCAAATGCTTGTGACCAACATAGATATCTACAGCTTATTTCAGCTA
TTCCCGGTAAATGGAAAAAACTACTTAGTACTGAGAAGCGTAAAGACCTT
GTGTGCCTGCCCTTTCAAAAAAATTATAAATGGTTACGAAATATAAAAAT
CAATAAAAGCATGTATATCTACTTTCTTACGTCCATGAACGAGGTCAGCC
TTGCACACAATACTAGACTTTCTTGGTTCTATTATTTTGACAAACCTATA
CCATGGCGAGATGTATTTACAAACTTATATAGATGTACTATTGATCCAAG
TACTAGATATTTTCAATACCGATTAATTAATGAATTTTTACCTTGTAAAA
AAATTCTACATATATGGAAATTAATAGACTCTAGCTCTTGTTCTTTCTGT
CATGACGATGTAGAATCCTATATTCATATTTTCTGGGAGTGTCCGCATGT
AGTATCATTTTGGAACGATGTAAAAAATTGGTTGAAAGTAGAAACTTCTA
TAGAGTGCTACCTAAATTCCTTTATTATCATATTTGGAGATACATGTAAC
GATGCGCCCCCCCTGAAAAATTTGATTATTTTGTTAGGTAAAGTTTTCAT
CTTCCGGTGTAGACGCTTAAAAATAATAAACTTCCAGGCCTTTAAAAGAC
TAATATCTACTTTTGAAAAAACTGAACGTCTCATTGCATCTCGGAGAGGG
AAGCTGGAGAAGCATCGGGGTAAGTGGGGAACTTTGTGTTTAATTTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113989-exon-Sc0000232-1564993656:212793..214676BlTCONS00113989-exon-Sc0000232-1564993656:212793..214676Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113989BlTCONS00113989-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000232genomeSc0000232:212793..214676 +
Properties
Property NameValue
GeneIDBlCUFF055883