BlTCONS00113987 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113987
Unique NameBlTCONS00113987
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000232:202570..204260+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113987 ID=BlTCONS00113987|Name=BlTCONS00113987|organism=Branchiostoma lanceolatum|type=mRNA|length=1691bp|location=Sequence derived from alignment at Sc0000232:202570..204260+ (Branchiostoma lanceolatum)
CTTATTTCATTGCTACTAAAAAAAGACAGTAAAGGTATAGACAAGGACCC AACTGCCATGGGGAATTGGCGCCCCCTTACCCTTTTAGGTTGTGACACAA GAATACTTTCCAAATGCATATCTTTGAGAATCAAACATGTAATTACGGAC ATAATTGAACAGGATCAGACAGGGTTTATTAAGGATAGGTATATAGGCGA CAATATTAGAAGACTAATAGACACAATAGAACATTACGATCAAGAGAGTA AACCTGGGTTAATATTTGTAGCTGATTTTAAAAAAGCATTTGATACGTTA AGGTGGGATTTTATGTTTAAAGCTTTAGAATTTTTCAATTTTGGTCCACA GTTAATTACATGGGTAAAGGTCTTATATGAAAAAACAACGAGTTGCGTCA TAAACAGCGGTTATATTTCAGACCCCTTCATTTTAAGTCGCGGAGTTCGC CAAGGATGTCCATTGTCCCCATATCTTTTTCTCATGGCGGTTGAGATTCT TGCTATTAAGATTAGGTCTAATCCTTCTATTCGGGGCTTAAAGATATATG AAAAGATTACAAAGATATCGCAGTACGCCGACGATTCAAATTTTCCATTC GAACCAAAGCTAGAATCATTTTATGCCTTGTTGTCTGATTTAGAGCGTTT TTCCAATATCTCAGGTCTTTCTTTGAATGTAGATAAATGCAAAATATTAC GATTAGGTCCCTTAAAATCCACGAATTTTCGTTTGCCCACTCATCTACCG ATACAGTGGGTTGACGGGGATGTTGACCTACTGGGTATCAATATTCCCGT TGATTTAAATTTAATTACAAGTGTTAATTTCGAACCCCGATTGGAGAGAT TAGATAGACTATTGCGACCTATGAAGAATAAATATCTGTCCCTGTATGGT AAAATTGTTATTATTAACACTTTGGTGGTTCCCCAATTTACAAATCTATT TCAAGTCTTACCATCCCCTAACGATTCCTTTTTCAAAGTATATGAAAAGA AGATATTTTCTTTTATTTGGGACAACGGTCCTGAACGAGTTGCACGGAGG GTTTTATACAATACATCGGAAAATGGAGGACTAAACTTAAAAAACTTACG CGCGTTCAACACTTCTATAAAAGCTTCATGGGTACCTAAACTTTATTCTC ATCCCGAATGGTTTTCCTCCTGGGTAACAGTCTTCCATCCTCAACTTAAT CATAGTTTATTTCCTTTTTACCAGCTGTCCTCGGTGATAAACCTTTGTTT AAAAGGATTTTTTTCTGAAGTTTTTATGTCCTGGTTTCAATTTCAGCACG TAGAGCCCACGACGCCGGCAAATATACGACAACAAGTAATTTGTTTAAAC TCTAATATTATTATTGATGGTAAAACTGTTTGTTTGACAGCTTTTATGAA TAGGAATATATATTTCATAAATGACTTGCTGTCCCCGGACGGCAATTTTA TGTCTTATGATGAATTCAGTACAAATTTCCCAAATGCTTGTGACCAACAT AGATATCTACAGCTTATTTCAGCTATTCCCGGTAAATGGAAAAAACTACT TAGTACTGAGAAGCGTAAAGACCTTGTGTGCCTGCCCTTTCAAAAAAATT ATAAATGGTTACGAAATATAAAAATCAATAAAAGCATGTATATCTACTTT CTTACGTCCATGAACGAGGTCAGCCTTGCACACAATACTAG

Coding sequence (CDS) from alignment at Sc0000232:202570..204260+

>BlTCONS00113987 ID=BlTCONS00113987|Name=BlTCONS00113987|organism=Branchiostoma lanceolatum|type=CDS|length=1689bp|location=Sequence derived from alignment at Sc0000232:202570..204260+ (Branchiostoma lanceolatum)
CTTATTTCATTGCTACTAAAAAAAGACAGTAAAGGTATAGACAAGGACCC
AACTGCCATGGGGAATTGGCGCCCCCTTACCCTTTTAGGTTGTGACACAA
GAATACTTTCCAAATGCATATCTTTGAGAATCAAACATGTAATTACGGAC
ATAATTGAACAGGATCAGACAGGGTTTATTAAGGATAGGTATATAGGCGA
CAATATTAGAAGACTAATAGACACAATAGAACATTACGATCAAGAGAGTA
AACCTGGGTTAATATTTGTAGCTGATTTTAAAAAAGCATTTGATACGTTA
AGGTGGGATTTTATGTTTAAAGCTTTAGAATTTTTCAATTTTGGTCCACA
GTTAATTACATGGGTAAAGGTCTTATATGAAAAAACAACGAGTTGCGTCA
TAAACAGCGGTTATATTTCAGACCCCTTCATTTTAAGTCGCGGAGTTCGC
CAAGGATGTCCATTGTCCCCATATCTTTTTCTCATGGCGGTTGAGATTCT
TGCTATTAAGATTAGGTCTAATCCTTCTATTCGGGGCTTAAAGATATATG
AAAAGATTACAAAGATATCGCAGTACGCCGACGATTCAAATTTTCCATTC
GAACCAAAGCTAGAATCATTTTATGCCTTGTTGTCTGATTTAGAGCGTTT
TTCCAATATCTCAGGTCTTTCTTTGAATGTAGATAAATGCAAAATATTAC
GATTAGGTCCCTTAAAATCCACGAATTTTCGTTTGCCCACTCATCTACCG
ATACAGTGGGTTGACGGGGATGTTGACCTACTGGGTATCAATATTCCCGT
TGATTTAAATTTAATTACAAGTGTTAATTTCGAACCCCGATTGGAGAGAT
TAGATAGACTATTGCGACCTATGAAGAATAAATATCTGTCCCTGTATGGT
AAAATTGTTATTATTAACACTTTGGTGGTTCCCCAATTTACAAATCTATT
TCAAGTCTTACCATCCCCTAACGATTCCTTTTTCAAAGTATATGAAAAGA
AGATATTTTCTTTTATTTGGGACAACGGTCCTGAACGAGTTGCACGGAGG
GTTTTATACAATACATCGGAAAATGGAGGACTAAACTTAAAAAACTTACG
CGCGTTCAACACTTCTATAAAAGCTTCATGGGTACCTAAACTTTATTCTC
ATCCCGAATGGTTTTCCTCCTGGGTAACAGTCTTCCATCCTCAACTTAAT
CATAGTTTATTTCCTTTTTACCAGCTGTCCTCGGTGATAAACCTTTGTTT
AAAAGGATTTTTTTCTGAAGTTTTTATGTCCTGGTTTCAATTTCAGCACG
TAGAGCCCACGACGCCGGCAAATATACGACAACAAGTAATTTGTTTAAAC
TCTAATATTATTATTGATGGTAAAACTGTTTGTTTGACAGCTTTTATGAA
TAGGAATATATATTTCATAAATGACTTGCTGTCCCCGGACGGCAATTTTA
TGTCTTATGATGAATTCAGTACAAATTTCCCAAATGCTTGTGACCAACAT
AGATATCTACAGCTTATTTCAGCTATTCCCGGTAAATGGAAAAAACTACT
TAGTACTGAGAAGCGTAAAGACCTTGTGTGCCTGCCCTTTCAAAAAAATT
ATAAATGGTTACGAAATATAAAAATCAATAAAAGCATGTATATCTACTTT
CTTACGTCCATGAACGAGGTCAGCCTTGCACACAATACT
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113987-exon-Sc0000232-1564993656:202570..204260BlTCONS00113987-exon-Sc0000232-1564993656:202570..204260Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113987BlTCONS00113987-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000232genomeSc0000232:202570..204260 +
Properties
Property NameValue
GeneIDBlCUFF055881