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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000232:94806..100359+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113974 ID=BlTCONS00113974|Name=BlTCONS00113974|organism=Branchiostoma lanceolatum|type=mRNA|length=5554bp|location=Sequence derived from alignment at Sc0000232:94806..100359+ (Branchiostoma lanceolatum)
GGAAGGGATCCGTGATTGTGCAGTGGCTTGGCCTTAAGGGAAACGTTTTC
ATACTGCCAGGTGGGGCTAAACAGAAACAGCATGAAGAAGAAGATGGGAT
GGAAAAGGAGGAGGAAGAAGAAGAGATTAACGTCATGGAAGAAGCCGAAT
TGGCTGAGCAACATCGACGTCTTGACAACGATAATGACCAAAGGGGGAAA
GCCAAGCAGAAATTCCGTGAATACGTACACGTGAACCTCGCGCTTGATGT
CGAAGCCCTCGAACTTGAAGAGCATCAGGCCAGGCAAAATGGTCAATGGC
AGGTACAGACCAATGCGAAGAAAACGAAGAAGACGGTGAAGCACGAACTC
AGCAAGACGGATATGATGTCCAACGCCGAAGTTATCCGTATACAAAATGT
GTGGACGCTGCAGCTACGGGACCGATGGCGCCTCTATCGTCACTGGGTGG
CCAAGTACTGTGCGAAACACAAAAAGTCCATCAGAAATTATGAGCGAGGT
TACGAACGTGCAGCCAAACGTCTTATGGAGTTTCAGAGCCAAGAAGACGG
TGAGATCATGAAAAAAGCAACTGTCATCGGAATGACCACCACGGGTGCGG
CCAAATACCGATCTCTCCTGCAGGACATTAGGCCTGCTATCATCGTTGTG
GAGGAAGCAGCAGAAGTTATGGAGGCCCACATCGTCACAACGCTGTCTCA
GCAGTGCCAACATCTCATCCTCATCGGGGATCACCAACAGCTCCGCCCCA
ACCCAACCGTCTACCAACTGGCGAAGAAATACAACATGGATATCTCTCTG
TTTGAGCGAATGGTAAACAACGACATGCAGTGTCAGCGGCTTCAGTCACA
GCATCGCATGCGGCCAGAGTTCGCACGTCTCCTGACGCCGCACATCTACG
AGTCACTGGACAACCACGAATCGGTGCTCAACTTCCAGAACATCAAGGGC
GTCTCGTCCAACATGTTCTTCGTAGATCACGGCTACTCGGAAGCACACGA
CAGCGACACTAAGAGCCGGTCCAACATGCACGAGGCTCAATTCATGGCCA
GCTTCTGTCGCTACCTTCTTCAGCAAGGGTACAGCCCGTCCCAGATCACT
ATCCTCACCACCTACACGGGCCAACTCTTCAGCTTCAAGAACGTCATGAA
GCACCCAGTCTTCAAGGGCGTGCGCGTCTCCGCTGTGGACAACTTTCAGG
GAGAGGAGAATGACATCATCCTGCTATCACTGGTGCGGAGTAATGACGAG
GGCAACGTTGGCTTTCTCAAGGTGAGCTAATTGCATTAATTCATGATGGT
TCTTTGATATTTACATGTAGTTGATGCTTATGTTTTGTGATCTCACGTTG
CCAATAAGACATCGTCGATCCTGCCGACAATGCCATTGTTAGAATTAAAG
GTCCGTTTACCATCAGACGAACACGCAATGATCTCTGCAAGCTACATTTT
ATTCAACTCACAGGACAGAGACCTTACTCGGGCCCCTGTCTCCGGTCAAC
TTGCCGGTAACTGACACTAGACCTCTCCCAGCCCAGAGCTCTATACCCCA
TGGGTTCTGGGCAATGCCATTCTCTGGTGTCGGGGGTGACACTTATCATA
ACAGTATGTTCTTGACTATGATTGTTTTTTTCTTTCTAGGTTGAAAACCG
TGTTTGTGTGGCTCTTTCTCGAGCGAAGAAAGGTTTCTACGCCATAGGCA
ATCTGACAATGCTGTCGCAGACTAGTACATTGTGGAGCAAGGTAATTTAC
AATGTAAAACGTTAGTTGGTACACTTTTGAAATTCGTTTAAGACTGTTAC
ATTCCAACGTTTTTGCACGATGTTTGATGCCTCTTGCGATTTTGTCGTTT
TCTTTCTAGATCATCCAAGAACTGCGGGAGCAAAGCTGTGTGGGCAGGCA
CCTCATGCTGTGCTGCCAAAATCATCCAGACACCAGCATCATGGCGGTCA
CTGAAAAAGACTTTGAAAAGGCACCTGCTGGTGGCTGCATGCGTCCCTGT
GATTTCAGGCGAGTAAACAGACTTTCGAGAATCCTGCCAAAGCAATACTT
GAACTGGGAGCTGAATTCTTCATCGATTGTGTTTTTCATTTTTTTTCATA
ACTTTTGATAATGATCCCGTTTGTCTTTGCTATACAGGCTGACGTGTGGC
CATGTCTGCGCAAGCGCATGCCATCCAACAGACCCTGAACACGAAGAGTA
CATGTGCAAGAAGCCTTGTGGGAATGTCTTATGTGACCTTGGCCATAAGT
GTCCGAAGTTCTGCTATGAGACCTGTGACGACTGCCAGGTACTTGTAGAA
AAGACCATCCCCAAATGTCAACACAAACAGATGGTCCCATGCTCTACATC
TCCAACTGAATTCATCTGCCGGATACCGTGTGAGAAGACCCTTCCATGTA
ACCACACATGCAAGAACATGTGTGGACAAGAGTGCAGCATTCCCTGCATG
CTAAAGGTAACACATCAGCTCACCTGTGGTCACACCATGAAGGCGGCCTG
CTCGGCTAAAGAAGACGACCTAGTCTGCATGGAGGAGATAACGCATCAGC
TCACCTGTGGCCATAACATCCAGGCAGTTTGTTCGGCTAAAGAAGACGAC
CTGGCCTGCATGGAGGAGATAACACATCAGCTCATTTGTGGCCACACCAT
GAAGGCGGCCTGCTCGGCTAAAGAAAACGACCTAGTCTGCATGGAGGAGA
AAATACATCAGCTCACCTGTGGCCATTCCATTCAGGCAGTCTGCTCGGCT
AAAGGAAACGACCTGGTCTGCAACACTCCGTGTACACAATTGCTGAAGTG
CGAGCACCCCTGCGCTGGTACATGCGGTCGCTGTAAGCAAGGAAGGTTGC
ACCAACAGTGCACACATCACTGTAACCGTGTTCTCGTCTGCTCCCACCAG
TGCACGGCATCCTGCACACAGGATTGTCCTCCGTGTACCAAACCTTGTGA
GAACCGCTGCGGCCACAGTCGCTGCCAACACGAATGCGAAAAGCAATGCG
TACCGTGTTACAAGCCCTGTGAGTGGAGATGCAGACATCACAAGTGTGAC
AAGCCCTGCAGTGAACCTTGCGATCGTCCACGATGTGACCAGCCCTGCCA
GAAGACCCGACGCTGTGACAAGTGCAAGAAAGACCAGCCATGCATTGGTA
TGTGTGGGGAACCATGTCCGGACAAGTGTCGCGTTTGTGATCGCGAGGAG
TTGACAGAGACCTTCTTCGGAACCGAGGAGGAAGACGACGCCCGATTCGT
GCAGCTGGAGGACTGTGGTCACGTGCTAGAGGTCAGGGAACTAGACGAGT
GGATGGACACCAGCGACAGAAACATCCAACTGAAAACCTGCCCGAAATGC
AAGACACCAATACGACGCAATCTGCGCTACGGAAACATTATCAAGAAGAC
GCTGGCAATGATCGAGAAGGTCAAGAGGAAGTGGTACAACGACGACGTTC
AAAGGGCACAAACGGCAAGCACTGCCCGCAGGCTGATGGGAGAGCTCCGA
TACGATATTGGCCTGGTCACGTACTGCACAGAGACCTCAGAGGATCTCCT
TCGGCAAATGCAAAGCCATCGTCTGTTCTCATTGAACCAGGTGGCTATGT
ATGAAAATAAAGTCCTCTTCTTGAAGAGACTTGCCAAACTTCAGAGAGAG
AGAAGACTACAAATTCGTGTCTATGGACGGAAAGATTTCATTGAACGTCA
TTTCAAGGGAATAAAGAAGGAGATCAAAGAGATGGAAGAGTGGCTATGCC
GCCGAACGGCCCGTGTGGGGGAACAGGTAAGGCCAGAATTATCTGCACTA
CACTTGGCTACCTTAGCACAATGATGTAGTTTTTGTCACAAGACATCAAT
CTCTTTACAATTGATAGTATAGGATTTCCGTCATTGCTGTCTGTTTTAGT
CACCTGGCGCTCATAACAAGATGGGTTCTGTTCACAGGAGTGGGAGGAGT
TCGGAAGAGAGACGACTCGACTGAAATACCTCCTGAAGCTCCGCGTCCTG
CAGGTGGAGCTCTGGAAGAAGGGAATTAGCCTGGACGACAAGGCAAAGGA
GAGCCTCATCCGTGCGAAACGCAGGCTGACCGACCTCAAACCTTTCACCG
CGATCAGAGAGGTTCTGGTCAAACAAGCTATGAAGAAGGTCGAAGCGCTG
ATGCCTAGACTAAGCCTAGCCCCTCTCGGCCTCTGCGATGAGGGGCCAGT
TCAAGTGGTGAAGGCCAGTGGACTGACCCAGGGACACTGGTTCGCTTGTC
CCAACGGACATGTGTACGCCATTGGAAACCGTGGAGGAGCTACGATGGTA
AGCATTGATTTGCATATCTTTTGTTAGCACAGCAAATTTTTAGCATCTTG
TTTGTTTAAATGGTAAAAAAACTATTACGGTATCAGGGCTTTACTCCGTT
AAAAACAGTCTTTTTCAACTGTTCTCGACAGGAAAGCCCTTGCCCGGAGT
GTCGTCCAAGCATCGGAGGAGTTCGCCACAGGCTTCGTCAGCTACAGGCT
TCGGTCGGACAACCTTCTGGCACCGAAGATCGACAGAGCGAGGCACGCCG
TCTAGTCCGAGTCGATAAGGCCACCTTGGAGAAAGTCTACGGCTTGAAAT
TCGACGACTAAGTGACAAAGGCTTGTTATCTAAACACCACAATCTAAAAC
CATGCGTAGTTATTTGGTGCCGTCTAAAAGAGATTGCTGAGAACAGTAAC
TAATCAGTGTGGATTATCAACTAGTGTGCTTTAAGAATGGTTTATCAACT
AGTGCGGTTTATTATCTTGTGCCGCTTCTTAACTAGTGTGCTTTACTAAC
TAGTGTGCTTTAATAACCTGACACTATAGGTGCCGTGAAAGACTTCCAAT
TTAGAGCACGCTCACTGCCAAATGCTTTAATGTAGCAGAAAACTAGAAAG
GCTCAATATAGACCAATGCTTAAACTTCTAGAAAAACGGTGTGATGTTGA
TGTACAAATATTTTGAGTACTTGGGCATCCTCAAAACAATACGATGTTTT
AAGGCTACAAAAAACTTTCATTTTTGCCTAACTTTGAAACGCAAAAACTT
CCCGAGCTGTAAAATATATCTGATTGAAATTTATACAACATATAGATACA
TAAAATAGCTACAAAATGAATGCTTGCAAAGTTTGGGTTCTTGGTTTGAT
AGCCTGAACCAACTTAGGGTCTTTAATTTGTGATGTTGATCATAATTAAT
GCAGAAAAGTTTCTTCTTCTTTTACGTCTTGTTAACTTTATGAGTACAAT
CTAGTATTTTCTTCAATCAGGTTATTTTGTTTACCTAGTATACCTGTTAT
AGATTCTTGGACAATGTGTCGCTCAGATCCAACGACTGTGAAACTTTGAG
ATCAACTAAATCTAGTATGCAACAATGTAATCTTTCCAGGCAAGTGTTTG
GAATATGAAGTCTTTTGTACAATCTTAATGTTCAGAAAGTAGTACAGTGT
GATGTGCCTTGTGAACTTATACTATGGCGTCAATAGAGACAGGAGCTTTT
TGTGATATTACCTAATTGTGTTCCTCGAAACCTAGTACACATGGATTAAT
AAAC Coding sequence (CDS) from alignment at Sc0000232:94806..100359+ >BlTCONS00113974 ID=BlTCONS00113974|Name=BlTCONS00113974|organism=Branchiostoma lanceolatum|type=CDS|length=3699bp|location=Sequence derived from alignment at Sc0000232:94806..100359+ (Branchiostoma lanceolatum)
AAGGGATCCGTGATTGTGCAGTGGCTTGGCCTTAAGGGAAACGTTTTCAT
ACTGCCAGGTGGGGCTAAACAGAAACAGCATGAAGAAGAAGATGGGATGG
AAAAGGAGGAGGAAGAAGAAGAGATTAACGTCATGGAAGAAGCCGAATTG
GCTGAGCAACATCGACGTCTTGACAACGATAATGACCAAAGGGGGAAAGC
CAAGCAGAAATTCCGTGAATACGTACACGTGAACCTCGCGCTTGATGTCG
AAGCCCTCGAACTTGAAGAGCATCAGGCCAGGCAAAATGGTCAATGGCAG
GTACAGACCAATGCGAAGAAAACGAAGAAGACGGTGAAGCACGAACTCAG
CAAGACGGATATGATGTCCAACGCCGAAGTTATCCGTATACAAAATGTGT
GGACGCTGCAGCTACGGGACCGATGGCGCCTCTATCGTCACTGGGTGGCC
AAGTACTGTGCGAAACACAAAAAGTCCATCAGAAATTATGAGCGAGGTTA
CGAACGTGCAGCCAAACGTCTTATGGAGTTTCAGAGCCAAGAAGACGGTG
AGATCATGAAAAAAGCAACTGTCATCGGAATGACCACCACGGGTGCGGCC
AAATACCGATCTCTCCTGCAGGACATTAGGCCTGCTATCATCGTTGTGGA
GGAAGCAGCAGAAGTTATGGAGGCCCACATCGTCACAACGCTGTCTCAGC
AGTGCCAACATCTCATCCTCATCGGGGATCACCAACAGCTCCGCCCCAAC
CCAACCGTCTACCAACTGGCGAAGAAATACAACATGGATATCTCTCTGTT
TGAGCGAATGGTAAACAACGACATGCAGTGTCAGCGGCTTCAGTCACAGC
ATCGCATGCGGCCAGAGTTCGCACGTCTCCTGACGCCGCACATCTACGAG
TCACTGGACAACCACGAATCGGTGCTCAACTTCCAGAACATCAAGGGCGT
CTCGTCCAACATGTTCTTCGTAGATCACGGCTACTCGGAAGCACACGACA
GCGACACTAAGAGCCGGTCCAACATGCACGAGGCTCAATTCATGGCCAGC
TTCTGTCGCTACCTTCTTCAGCAAGGGTACAGCCCGTCCCAGATCACTAT
CCTCACCACCTACACGGGCCAACTCTTCAGCTTCAAGAACGTCATGAAGC
ACCCAGTCTTCAAGGGCGTGCGCGTCTCCGCTGTGGACAACTTTCAGGGA
GAGGAGAATGACATCATCCTGCTATCACTGGTGCGGAGTAATGACGAGGG
CAACGTTGGCTTTCTCAAGGTTGAAAACCGTGTTTGTGTGGCTCTTTCTC
GAGCGAAGAAAGGTTTCTACGCCATAGGCAATCTGACAATGCTGTCGCAG
ACTAGTACATTGTGGAGCAAGATCATCCAAGAACTGCGGGAGCAAAGCTG
TGTGGGCAGGCACCTCATGCTGTGCTGCCAAAATCATCCAGACACCAGCA
TCATGGCGGTCACTGAAAAAGACTTTGAAAAGGCACCTGCTGGTGGCTGC
ATGCGTCCCTGTGATTTCAGGCTGACGTGTGGCCATGTCTGCGCAAGCGC
ATGCCATCCAACAGACCCTGAACACGAAGAGTACATGTGCAAGAAGCCTT
GTGGGAATGTCTTATGTGACCTTGGCCATAAGTGTCCGAAGTTCTGCTAT
GAGACCTGTGACGACTGCCAGGTACTTGTAGAAAAGACCATCCCCAAATG
TCAACACAAACAGATGGTCCCATGCTCTACATCTCCAACTGAATTCATCT
GCCGGATACCGTGTGAGAAGACCCTTCCATGTAACCACACATGCAAGAAC
ATGTGTGGACAAGAGTGCAGCATTCCCTGCATGCTAAAGGTAACACATCA
GCTCACCTGTGGTCACACCATGAAGGCGGCCTGCTCGGCTAAAGAAGACG
ACCTAGTCTGCATGGAGGAGATAACGCATCAGCTCACCTGTGGCCATAAC
ATCCAGGCAGTTTGTTCGGCTAAAGAAGACGACCTGGCCTGCATGGAGGA
GATAACACATCAGCTCATTTGTGGCCACACCATGAAGGCGGCCTGCTCGG
CTAAAGAAAACGACCTAGTCTGCATGGAGGAGAAAATACATCAGCTCACC
TGTGGCCATTCCATTCAGGCAGTCTGCTCGGCTAAAGGAAACGACCTGGT
CTGCAACACTCCGTGTACACAATTGCTGAAGTGCGAGCACCCCTGCGCTG
GTACATGCGGTCGCTGTAAGCAAGGAAGGTTGCACCAACAGTGCACACAT
CACTGTAACCGTGTTCTCGTCTGCTCCCACCAGTGCACGGCATCCTGCAC
ACAGGATTGTCCTCCGTGTACCAAACCTTGTGAGAACCGCTGCGGCCACA
GTCGCTGCCAACACGAATGCGAAAAGCAATGCGTACCGTGTTACAAGCCC
TGTGAGTGGAGATGCAGACATCACAAGTGTGACAAGCCCTGCAGTGAACC
TTGCGATCGTCCACGATGTGACCAGCCCTGCCAGAAGACCCGACGCTGTG
ACAAGTGCAAGAAAGACCAGCCATGCATTGGTATGTGTGGGGAACCATGT
CCGGACAAGTGTCGCGTTTGTGATCGCGAGGAGTTGACAGAGACCTTCTT
CGGAACCGAGGAGGAAGACGACGCCCGATTCGTGCAGCTGGAGGACTGTG
GTCACGTGCTAGAGGTCAGGGAACTAGACGAGTGGATGGACACCAGCGAC
AGAAACATCCAACTGAAAACCTGCCCGAAATGCAAGACACCAATACGACG
CAATCTGCGCTACGGAAACATTATCAAGAAGACGCTGGCAATGATCGAGA
AGGTCAAGAGGAAGTGGTACAACGACGACGTTCAAAGGGCACAAACGGCA
AGCACTGCCCGCAGGCTGATGGGAGAGCTCCGATACGATATTGGCCTGGT
CACGTACTGCACAGAGACCTCAGAGGATCTCCTTCGGCAAATGCAAAGCC
ATCGTCTGTTCTCATTGAACCAGGTGGCTATGTATGAAAATAAAGTCCTC
TTCTTGAAGAGACTTGCCAAACTTCAGAGAGAGAGAAGACTACAAATTCG
TGTCTATGGACGGAAAGATTTCATTGAACGTCATTTCAAGGGAATAAAGA
AGGAGATCAAAGAGATGGAAGAGTGGCTATGCCGCCGAACGGCCCGTGTG
GGGGAACAGGAGTGGGAGGAGTTCGGAAGAGAGACGACTCGACTGAAATA
CCTCCTGAAGCTCCGCGTCCTGCAGGTGGAGCTCTGGAAGAAGGGAATTA
GCCTGGACGACAAGGCAAAGGAGAGCCTCATCCGTGCGAAACGCAGGCTG
ACCGACCTCAAACCTTTCACCGCGATCAGAGAGGTTCTGGTCAAACAAGC
TATGAAGAAGGTCGAAGCGCTGATGCCTAGACTAAGCCTAGCCCCTCTCG
GCCTCTGCGATGAGGGGCCAGTTCAAGTGGTGAAGGCCAGTGGACTGACC
CAGGGACACTGGTTCGCTTGTCCCAACGGACATGTGTACGCCATTGGAAA
CCGTGGAGGAGCTACGATGGAAAGCCCTTGCCCGGAGTGTCGTCCAAGCA
TCGGAGGAGTTCGCCACAGGCTTCGTCAGCTACAGGCTTCGGTCGGACAA
CCTTCTGGCACCGAAGATCGACAGAGCGAGGCACGCCGTCTAGTCCGAGT
CGATAAGGCCACCTTGGAGAAAGTCTACGGCTTGAAATTCGACGACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113974-exon-Sc0000232-1564993656:94806..96076 | BlTCONS00113974-exon-Sc0000232-1564993656:94806..96076 | Branchiostoma lanceolatum | exon |
| BlTCONS00113974-exon-Sc0000232-1564993656:96445..96546 | BlTCONS00113974-exon-Sc0000232-1564993656:96445..96546 | Branchiostoma lanceolatum | exon |
| BlTCONS00113974-exon-Sc0000232-1564993656:96665..96813 | BlTCONS00113974-exon-Sc0000232-1564993656:96665..96813 | Branchiostoma lanceolatum | exon |
| BlTCONS00113974-exon-Sc0000232-1564993656:96943..98581 | BlTCONS00113974-exon-Sc0000232-1564993656:96943..98581 | Branchiostoma lanceolatum | exon |
| BlTCONS00113974-exon-Sc0000232-1564993656:98743..99102 | BlTCONS00113974-exon-Sc0000232-1564993656:98743..99102 | Branchiostoma lanceolatum | exon |
| BlTCONS00113974-exon-Sc0000232-1564993656:99237..100359 | BlTCONS00113974-exon-Sc0000232-1564993656:99237..100359 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000232 | genome | Sc0000232:94806..100359 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055869 |
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