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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000232:45938..53777+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113968 ID=BlTCONS00113968|Name=BlTCONS00113968|organism=Branchiostoma lanceolatum|type=mRNA|length=7840bp|location=Sequence derived from alignment at Sc0000232:45938..53777+ (Branchiostoma lanceolatum)
ATTTTAGACAGCCTTGTCTTTTGTCGCTGCAAGAAGTGGATTAAGTCGGT
CGAAGATGTCCCAGGAAATGACGAAAACGAGGTATGTTTTAGCAAATATA
CAAAAGTAACGGGTTCCGCACTAGTATTGCAGTGCTAAATCAAAGGGTCG
AATCGGCCTCAGCACTGGGGGCCTAGTGCTGAAGAAAGTTCAGCAACAAC
AAACCTCAGGCAGTTTAAGGCCTGTGCCAATTTCTGTCGAACATGAATTT
CGAACCACTCAGTGACCGCGGCTAACCTTGCTAGACCGTGCCGTTTTCAG
AATGGTCCAATGGCACAGTGTAACGTTATATTGCAAAAATAGGAATTCAG
AAGACATTTGGCATACTAACTACTTTTGATAGGAATTATCGATAATAACC
GTGCAGCTATTGATCAAGTATGTATCACTTATTGACATAAGTAGAGGCTA
TTAACAAAAAGGGACCCGCGTGGAAGCTGCAAAATGGTACCGTCCGAACA
TGTTCGAACGTTCGAACGGCCCCCCGGGTTGTAGTTTGGCGCGAAAACGG
CTGGTATTTATACATCAGCTGGGGACGAACAGTAAACTAAAATGGTTATT
TCTAAATCAAAATCATTGTACAGCAAGGGAGATTGTAGATTTATTACCTT
CATGAAAAATGGAGATATAGTTTTGGGTGTGTCTGTGTGTCTGTGTGTTT
GTTGGTCTGTTTGTCTGTTTGTCTGTTTGAGTTTCCGGACCACTGTAGTC
AGCATAACTTAAGAACCTCTGGATAGATTACGAACATATTTGGTATGTGG
GCAGGTGTTATGAAGCCGAAATTCAAGGTCAATTTTGGGCCCCCTGGTAT
GTGACCTTGGCACTGCAGCAGAAATTCAATTTTTGTATCGCTTGCCCTGG
ACGTGCTATGGTCTTGATTTTTTGGCGGCAGATAGCTTGTGGTGTAATGA
AGACGTGGTGTGGGTTTGGGCCCCCTAGCAGCTTGCTCTGGAACTACAGG
GGCGTTATCGTGAAAATCTTCTAAGGAGAATAACTGAACAAAGGAACGAT
GGATTTCCATGATATTTAGTATANTCATCTAAATGGAAAATTACAGGACT
GTCAATATTGCAACATGTGTAAATTAGATAAAGGTGTTTATGACCAAGCA
TATATTATGCAAATGTGTAAGTCATTTGCATGAATAGAATTGTTCATGGA
GATATGAGGTCGTGGAACTCTTGTTTCATATGTACCGCACAATACTAACT
GTCGGCGAAGTTGTGTATTGATACGATCACACGTTTAACAGTTACAAACA
TATAACGTACGTATCTTACCATTAATTGTGTCACAGGTCTTAAATGACCG
CAGTTTGCGTAAGGCAAGTGTTGTTTCGTCGGCCGCTGCCCACTACAGGA
TACCAGTTTTGTCGCGAAATTTGTACAGATTTAACTTTATTTAGCTTTAG
TCCTTCTGAATAAAACCGGGCCTTTTTGCGATTTCCTTGATTTTGTTCGC
TGTGTTGATTATTGTACAAAAAATGCTCAAAATGGTCGAAGTCTGTTTTT
GACTCAAATTTAAGCCTTACAGTTGTATGTAGTCAAGAGGCCCGGGCAGT
TTAGACATCTCAGAGATACTATCTATTACTCCATAAAAAAAGCACTCTAG
ATCTGTTAATTAGCAGTCGTTTCAAAGTGGGCACAAGCCCATTTAATAAC
ATATACATTTTTTCACCAATAAGTGAGTTTTTCACCCCAAATATATGAGA
TTGAAAATTTTCTTGTTTTGATATTCTAAATATTTGGTATTTACACCACC
TGGCCAAATTTTGTTGAAAACAGATAGATACATCAAAAGTTATGGTCATA
TACTGCTAACCTAGCCAACCCCTAGGTGTCACATGACTTATTGGGCTGAA
TAGTGCTGTACGGTCCTTGTTCCAGCGCTGAAGCCCACTTAGGACAGAAA
TTTTAGTTCTAGACCCCGTGTCAGCACTGGATTTCCAGTGCTGAACTTCT
CCAATCACTGTTTTTCTAGTGCTGAACTCATCTCATTGCTTGGTTAGTCT
CTACCAGACTAACTACATCGGCTAACTACTTGCTAATCATTCCTTTTTCT
GACAAATTCTACGATCCATACGCCCTTAGGAGGGCCTGGTGGAGGCTAGC
ACTTGGTTTGCTAATGCTGAACTGTCAGCGCGATGGCGGCAACCCAGTTC
AAAGGTCATTTAGCACTGAATATCCAATGCTGAAACAGCACTTGAACCGA
GTACTCATATACAAAAGTAAGAGGTTCCTCCCTGAATTTACCAGTCCTTG
GGGACTTTCCAAAAACCAGTTTGACCTTTGAATCCTTATTCTTAAAACAT
GTATTCGCTTTAACCCCCCTGAATATGTTCCCATTAGCGCAGCGACCGAT
ATTTTTCAGGGCGAACTGAGCATTTGCCTAAAAGATAGCTGTCTGCACCA
GGGCCAGACTGTCCTTCTTGTGGAATAACTTGGAAAAATTGGTAAATACG
TGATCTTGACTTGATGTTTTCTATAAATGCCCTGCCTTCCTACATGCAGT
GACCCCTTGCTCTACACGAGATTCCTACAGGAAGCCCTATCCCATTGCCT
TCGCTACTCATCTCAATTTCTGGTACCAGCCTACATGAGACACATGTTCA
CGTACTGTAGAGATAGGGCAACTAGAACAACACGACAAAGCAAGTCTAAC
CTACTGTATGTACCAATGGTCCGTAGAGAAGTATATAAAAGGTCTATCTC
CTACTCAGGTACTACTCTATGGAATAGTCTGGCACCAAACTTGAGAACGG
CGCCTTCAGTTGCAACATTTGAAAATATGTTGCAACGAGAAACTATGAAC
TGAATATGATTACCGAATATGGAAATGATGTTATATCGTCGACTTATCTT
TATATGCTGAATATGATTATGGAATACTGATTGTAACGTTATCTTTGTAT
AACAATTTATGTTTTATTTTCAGATGGTATGTTGAAAGGACCCCTGACCT
CCTCCCTTGAACTCTTGAAAAACGGCCTCGGCCGAATGAGTGCATGTTTT
GCGTACTTTCAAGGTTAAATAAAGGTTGAAAAAAAAAGGTCAAATGGTCC
TTCCATCGTTTAGGTAGCGATCTATAAGTGATTGCATACAATACATCTGA
ATCGTAATATAAGGTCTTTACCCCATGTACCCTGCATGTTAGACCCGGGT
GAGATCGGATGTGACATGGTTTGTTTATTCAATATTCTACAGTAAAACAA
ACAAACAGCCTTGCAGGTAACCATTGTTAACCTAAATTGCGCTGGAGGTT
ACAGCTAAATATATACATTGAATAGAGGGAGATTACATTTACAGTCAGAT
AGTCTAAAATCACAATTTCTATTGTATGATTCATTTCATCTGTTCGTTTA
CAGACTGAATTATTATCTTCAACCATAATTGCACGGGGTGTTTGGGCGTA
CTGCAGGGTGATTTTGGAGATACATAGTAACGTTTTAGACGATGTCGACG
TCTTATTACTTGCTTTTTTTCTCCAGTGGATTCCATCAGCTTGTGGAGCT
GTACAACATGCGGGAACATCCCGAGGGAGGCTGGTACAACGAATCCTTTA
GGTCACCCGTCCATTTTAAGGTCCATTATTACCTTCGCCAAGAAGGTTAT
GTTTTCATTAGCGTTCGTTTGACATCTCGTGTTCTGGACATGCTGAGGTT
ATGATTCTATAGATAGCAAATAGCTCTTCGGTGGAAGAATAAGTCGCGTA
GGTTTGGGCACCCTAGCGGCTTTCTTTTTTAATCTGCAAGAGTTGATTCT
GTTTCAAACTTTGAAAGAGGATGACTCAAGGAGGGATTGACGGATCGTCA
TGATTTTTGATAGGTAGATGGCTTATGATTTGTTTACATGATCATATGCT
TTTTGTGCAAATCAGGATCTAATTTGTGTAATTAATGAGGAAAAAATAAA
ACCCGCTGCATAGGACTCTCAAAATCTGACATATATGACTGAGAAAGAGA
GAAATATTGATAGATATCAATTATGCAAATAAAGACCTGATTTGAATAAT
TGATGTGAAGATGCTATAAATCCACTGTGGTAAATGACGGTAATTTCACT
TTTCCAGCATTTAAGAAGTAAGTGAATTTGGACGTTTTCGGACATAAATC
GTGTGAGCGAGTGCCTCATTTACTTATTTTATGATGTAAGGCCTTAGGTT
TTTCTTCAAGATAAGACTTTCATACTTTGAACAACTTTTGTTATTGGAGT
AGAGAAGTCAACTGATCAACTGATATATTTCATGCAGATGATAACTTAAT
GTGCATAATCGATGAGAAATATCATATGTCATTTGAATAGTGTCAAGACA
ATTGCAGTAGGAGAACACACAAGATTACTACTCGAAAAGGTAAACTTTAT
TTGGCGAAGGTATGAGGTCGTGGAACTCCCGTTTATCATACTGTCATATA
ATATATTTTGCGTGTATTTGCGTCGACCGCAACTGCATCTTTAAGATATT
TTTCATATATTTTGAACTGCATATGTATCGTTCACTTTTCAATAGAATAC
CGTATAAAAAATTATCATTTGATGTGGACCAATTACAAGCCTTCATTCCT
CCCTTCGCTCACTCGGTGGTTTATCTGATGGGCTATAATAACCTGCCAAG
CGTTATCTCACTGTTAACACCGTGGGAAAGGCGTATTTAATTAGTTGAAT
ATGTAACGGCCCCTTTCCCCCACAGACTGAAGACGGCACAGAGTCTACCA
CCGCCACAGTTTGTTACTACCTGCTGCCTGAAGTGGTACGGTCCACCTGG
CGCCGACTGACGTCAGACGAAATATGGCTGTACCAAGATGGCGGCTGCCT
AAAGGTACCTGTGTTTCTGCTTCACCGNTCATGATTCACCGTCCAACCAA
TCGAAAAGACATATATGGCATATGCCAATGGCTGTATTTAGGACACAAAA
CTTAAGCTTTCAACCGTACTTAAAAGGCATAGCTGATCCGGTCTTTGTTT
AGGTACTAGTATGAGTGGATCCAGTGCACTTGTCTGTCATGGCTCTTTAT
GTAAATTAAGCCAGTACGCATGATTTATGCAGTGGATAAAAAGTGCCAGA
GATAGCTTAACTGTGCCCCTTGCGGTGGTTAGTTCTAAAACAAAGCATAT
TTTAAAAACTGTGTAGCTATTCACTTCCAAGTATATTTAAAGGTGTACTT
GATATTACAACCTCGTTCGATGTTTAATATTGCAGATTCATATGATTGAC
GCAAACGGCATTTACTCTACTGCTGTCCTGGGAAGCACCCTTCGACACGG
AGAAGCCAGGTATGAAGTTCTTGTGCCTGCTGGAGTTTGGGGTGCAGCAG
AAGTTATGCATGGCGGAGAATTTACGCTCATAAGCTGTGTTGTTGCACCA
GGTAGGTATAACAAAATGTTAAAAGGCAAGCTATCAAAGACTAGCAAGAA
GCATAATGTTCAATACTACAACTGCTGCTGCTACTACTACTACTACTATC
ACTTCTACTGCTACTACGGCTGCTACTACTACTACTACTTTTTCTACCAC
TTCTACTGCTACTACTACCATTTCTACTACCACTACTTCCACTACTACTA
CTACTACTACTTCTACTACTACTATTACTTCTACTGCTCTTACTACTACT
ACTACTACTGCTATCATTTCTACTGCTCTTACTACTACAGTACTCCTACT
ACTACTACTATCACTTCTACTGCTACCACTTCTACTACTACTTCTACTGC
AAATAAATTATCACTATTGTAACGCGTATTTCTGCTCTATTGTGTGTAGA
TATACGGTATGCCAAAGACATCTTTGATACTTATTAGTAAGAGTAATCCT
GCATAAAAAAAAAAGTAAAGACAGTCTTTGTAATACATAGAATACGTAAC
CAGCTACTGAATGTTTTTTTGCAGGTTTTGACTGGAAGGGTTTGGAGCTC
GGCCAGGAAGAAGAACTGGTGACGTCATTTCCTCATCTGGCTGACGTCAT
TAAATATTTCTGTAAACATTAGCTAAAAAGTAAGCTTTTTTCTGAATACT
GAGAGCGAAGATACGTTTTATTAGCCCTTATTTTACACCAAGCTTATGAA
ATTTCACATACTTGTTTTTTCGTTCATTGGATTTCAGTATATTTTACGTG
GTAGGGAAGTTTCATTGTTTGATATTAACATTAAGTTCATCTGAAATCTT
GTCCATGTATTCTATACCAACGTTTATCACTTTTTATTTTTGACCCTCCG
AAGATCTGTCTTTGAAAGTTGTAGCGAATTACAGTGTATGCTTTTCAACA
CTAACTTCATATGAAATCTAGCACCGTACATTTTATACTAAGTTTCCTTA
CTTGAGGAGCCTCCTACAGTAATTCAGCAAGTTGATAGTTTGATTGTATA
CAAGTGTATAAGGGCGTTGACCCATTTTTTGTGTATTTCAAGCCTGTCGG
ATGATTGTTATCTCAGCCAAGAAAATGTTTTCGGTAGCGTTTGTGTGTCT
GTGTATGATTAATTGACCAGCATTACTCGAGAAGGCGTGGATGGATTGGT
AGGTGGCTAGGTCTTGATGAGACTTGATTAGATTTTGGGTCCCCTAGCGG
CTTGTTACGGTACTGCAGCGGAACTTCCTGTTTTGATATGAGGGGCAGTT
TTTCATGGGGGGGGGGCAACTTTTCATGGGGAAACACTTACTTCGGAGAC
ACTTGCGTAGGGAAATAGATCTGTACTTTGACATAGGGGACACTTGCACG
GGGGCACTTTGTCATGGGTCAATTTTCACGGGGGACAATTTTTCATGGGG
ACAATTTTTCATGGGGGAAAATTTTTCATGGGGAGAATTTTTCATGGGGG
ACAATTTTTCATGGGGACAATTTTCCATGGGGACAATTTTTCATGGGGGA
AAATTTTTCATGGGGACAATTTTTCATGGGGGACAATTTTTCATGGGGAC
AATTTTCCATGGGGACAATTTTTCACGGGGGGAAATTTTTCATGGGGACA
ATTTTTCATGGGGGACAATTTTTCATGGGGACAATTTTCCATGGGGAAAC
ACTTTTACTTCGGGGGCGTGGGGAAATTCCAACATTGATTGGATATGTGA
ACGGCCGAAAAGTATGTTAAGCTGTCTGGTGCAGTGACATCTGTGAGCGT
TACAAAATATACATCAACGCTGTAATAAGAGTGACAAACCTGTTTTAGAA
TGAATTGTTAGACTTATGTTATTTTTTTGTTAATTTTGATGGGGGCCCGG
GAAGACCTTGTACAAGCCATCATGGCTTTTTCTTCCCCCCCCCCTACTGA
TTGCAATATGTGCAAATAAATCAAATAAAATAAAATCAAATTATGTCGAA
GAACGTATGACATTAATTTCATCATCGTTTCGGGGACTCGATCTAAATGT
GTGTAGTAGGGACGGCCACAGAATCATTGTGATCGTCGTGTTGACCTATC
TGTAAAAAATTATTAGTAAGGACAGCTTTGCCCTATTACGTTATTGTTAT
TTCAGTTACTATCTAATCAGGATTTCTGTTGTTTGATGAATAGTTATATT
TTCACGTCAATCTTTATTCCTGTACTATTTGTTATTATTTGACATTTTTG
GCGACGCCTCAGGGGGGGGAGCCTATTGTATAGTACTGCTTTCGGTTTGC
CAAATATTCTAGGATTTTCACGAACGCATTCCCTAGGGAATTACTTTTTG
GCAACGCCTTGCAGGTATGGCCTTTTCTATAGCAAGGACGAAATTCCATT
GCATACGGCATAGAAAATGCCCTAGTTTGTATACACTTTTACAGCTGTTT
ATCGATGTTTGAAATAAAGTTTCTGGATGTTGCAATATAT Coding sequence (CDS) from alignment at Sc0000232:45938..53777+ >BlTCONS00113968 ID=BlTCONS00113968|Name=BlTCONS00113968|organism=Branchiostoma lanceolatum|type=CDS|length=330bp|location=Sequence derived from alignment at Sc0000232:45938..53777+ (Branchiostoma lanceolatum)
ATGTCCCAGGAAATGACGAAAACGAGTGGATTCCATCAGCTTGTGGAGCT
GTACAACATGCGGGAACATCCCGAGGGAGGCTGGTACAACGAATCCTTTA
GGTCACCCGTCCATTTTAAGACTGAAGACGGCACAGAGTCTACCACCGCC
ACAGTTTGTTACTACCTGCTGCCTGAAGTGGTACGGTCCACCTGGCGCCG
ACTGACGTCAGACGAAATATGGCTGTACCAAGATGGCGGCTGCCTAAAGA
TTCATATGATTGACGCAAACGGCATTTACTCTACTGCTGTCCTGGGAAGC
ACCCTTCGACACGGAGAAGCCAGGTTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113968-exon-Sc0000232-1564993656:45938..46018 | BlTCONS00113968-exon-Sc0000232-1564993656:45938..46018 | Branchiostoma lanceolatum | exon |
| BlTCONS00113968-exon-Sc0000232-1564993656:49464..49557 | BlTCONS00113968-exon-Sc0000232-1564993656:49464..49557 | Branchiostoma lanceolatum | exon |
| BlTCONS00113968-exon-Sc0000232-1564993656:50663..50791 | BlTCONS00113968-exon-Sc0000232-1564993656:50663..50791 | Branchiostoma lanceolatum | exon |
| BlTCONS00113968-exon-Sc0000232-1564993656:51173..51246 | BlTCONS00113968-exon-Sc0000232-1564993656:51173..51246 | Branchiostoma lanceolatum | exon |
| BlTCONS00113968-exon-Sc0000232-1564993656:51862..53777 | BlTCONS00113968-exon-Sc0000232-1564993656:51862..53777 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000232 | genome | Sc0000232:45938..53777 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055862 |
|
