BlTCONS00113947 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113947
Unique NameBlTCONS00113947
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000231:447389..449170-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113947 ID=BlTCONS00113947|Name=BlTCONS00113947|organism=Branchiostoma lanceolatum|type=mRNA|length=1782bp|location=Sequence derived from alignment at Sc0000231:447389..449170- (Branchiostoma lanceolatum)
CAAGGACCAGTCCGTAGGACAGACGTTGTCAAATAAAGACGGTAGATGTT GTAAAACAAAGGCCGCCATGTTTCCAGCAAATCGCCTGAATTAAGAGTTG GAATTTCCGAAGAAACTTTATATTTTTTGTTGTAGTATAGCGTAAACTTT CTTGTAAACATGCTGTAAATTTTTCACCCCCCTAGAATTCGCTTTTCGTG CAACGGTAGGGTAAACAATGATGCAATTTTCCCGCTTGGTCGGGTAGATT TTCTTGAGAACTTTCCTGTATACTAGTACAGTATGTAGAATGTTTGTATG ATTTGCTACCGGTGAATTCTTGCATGTTTTTTTCAATAGATCTTTATTTC ATTCTTGAAGAAGAAGTGTGTCTTGTCATTACTAGTTGTACGTGTTTATC TTGTGAATGTCGCCGACGTCACATTGCCAAGGCAACGCTCAGTTGTGTAC GTTCGAACTTCGAATGGAACGGTTACATTCCAAGACGTCACAAGACGTTC TGTTTACGTCCTCACGTTGGATGTTTGCTTCAGTTTACTGTACGAAAGCC TTCAAGATGGACAGAGTTCGTAACAACAGCTTTCAACGTCTACGAAAAAT GGTTCTCAGACAAGACTATGTTTCGGGAATAAGGTTGGAGAAGTTATCTT ACCTCATACGTGATGACTTGATAAAACATTATGCGCCACAGTTTATGTAA CCGCACTTTTCAAACGTCAAATGTGATCCGAAGTTTTTGACCTTCACAAA ATGTGGTTCTAAGCCCTTCTAATGTTGTGTCATTTACGGCGGGGCTCAGA CTTCGTACAGGCTATCTTGTTTCTGCGTTGGGCCGATTATAGCACTGATT CCAAATGTTAAAACAAGGACCAGTCCGTAGGACAGACGTTGTCAAATAAA GACGGTAGATGTTGTAAAACAAAGGCCGCCATGTTTCCAGCAAATCGCCT GAATTAAGAGTTGGAATTTCCGAAGAAACTTTATATTTTTTGTTGTAGTA TAGCGTAAACTTTCTTGTAAACATGCTGTAAATTTTTCACCCCCCTAGAA TTCGCTTTTCGTGCAACGGTAGGGTAAACAATGATGCAATTTTCCCGCTT GGTCGGGTAGATTTTCTTGAGAACTTTCCTGTATACTAGTACAGTATGTA GAATGTTTGTATGATTTGCTACCGGTGAATTCTTGCATGTTTTTTTCAAT AGATCTTTATTTCATTCTTGAAGAAGAAGTGTGTCTTGTCATTACTAGTT GTACGTGTTTATCTTGTGAATGTCGCCGACGTCACATTGCCAAGGCAACG CTCAGTTGTGTACGTTCGAACTTCGAATGGAACGGTTACATTCCAAGACG TCACAAGACGTTCTGTTTACGTCCTCACGTTGGATGTTTGCTTCAGTTTA CTGTACGAAAGCCTTCAAGATGGACAGAGTTCGTAACAACAGCCTTCAAC GTCTACGAAAAATGGTTCTCAGACAAGACTATGTTTCGGGAATAAGGTTG GAGAAGTTATCTTACCTCATACGTGATGACTTGATAAAACATTATGCGCC ACAGTTTATGTAACCGCACTTTTCAAACGTCAAATGTGATCCGAAGTTTT TGACCTTCACAAAATGTGGTTCTAAGCCCTTCTAATGTTGTGTCATTTAC GGCGGGGCTCAGACTTCGTACAGGCTATCTTGTTTCTGCGTTGGACCGAT TATAGCATGATTCCAAATGTTAAAACAAGGACCAGTCTGTAGGACAGACG TTGTCAAATAAAGACGGTAGATGTTGTAAAAC

Coding sequence (CDS) from alignment at Sc0000231:447389..449170-

>BlTCONS00113947 ID=BlTCONS00113947|Name=BlTCONS00113947|organism=Branchiostoma lanceolatum|type=CDS|length=309bp|location=Sequence derived from alignment at Sc0000231:447389..449170- (Branchiostoma lanceolatum)
ATGTTTTTTTCAATAGATCTTTATTTCATTCTTGAAGAAGAAGTGTGTCT
TGTCATTACTAGTTGTACGTGTTTATCTTGTGAATGTCGCCGACGTCACA
TTGCCAAGGCAACGCTCAGTTGTGTACGTTCGAACTTCGAATGGAACGGT
TACATTCCAAGACGTCACAAGACGTTCTGTTTACGTCCTCACGTTGGATG
TTTGCTTCAGTTTACTGTACGAAAGCCTTCAAGATGGACAGAGTTCGTAA
CAACAGCCTTCAACGTCTACGAAAAATGGTTCTCAGACAAGACTATGTTT
CGGGAATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113947-exon-Sc0000231-1564993656:447389..449170BlTCONS00113947-exon-Sc0000231-1564993656:447389..449170Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113947BlTCONS00113947-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000231genomeSc0000231:447389..449170 -
Properties
Property NameValue
GeneIDBlCUFF055855