BlTCONS00113909 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113909
Unique NameBlTCONS00113909
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000231:47758..66363-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113909 ID=BlTCONS00113909|Name=BlTCONS00113909|organism=Branchiostoma lanceolatum|type=mRNA|length=18606bp|location=Sequence derived from alignment at Sc0000231:47758..66363- (Branchiostoma lanceolatum)
CGCTGACATACAAGCGGAAATGTACATCAAACAACTGTCTTCGTCACAAA
GTGAAGTTAAACGGTGCACAGTCACCGCTGACGCACAAGCGTTTGATAAA
GAAAAATGTACATCAAACAACTGTCTTCGTCACAAAGTGAATTTATCGTT
TTTTCTTTTGCCCAGCATCATTGATGTGAACGTTGGGCAGCCACCGCTGA
CATACAAGTGGTTACTTAAGAGAAATGTACATCAAACAACTGTCTTCATC
ACAAAGTGAAGTTAAACGGTGCGCTGTCACCGCTGACGCACAAGCGTTTG
ATAAAGAGAAATGCACATCAAACAACTGTCTTCGTCACAAAGTGAATTTA
TCGTTTTTTTCTTTTGCCCAGCATCATTGATGTGAACGGTGGGCAGCCGC
CGCTGACATACAAGCGGTTCCAGGCTATCCTGTCCAAGATGGACCCTCCA
GACCAACCCGTGGACGCCATCACAGCAAGCACCGTGGACAATCTGACCAC
ACCCATCAGAGAAGACCACGACGAGAAATACGGAGTACCGTCTCTCGAGG
AGTTAGGTGGGCAAAAGATTATTGACCTTGAACTTGGGGCTCATGTGCCG
GATTTGTGTTGCGTGTTGTTGAAAGTTTGCAGATTTAAACTTCCTGGTGT
TAGATATTTTATTGGAAGTATATTGAAAAAAGTAAAAATCTATTTTTGTT
TGCCATTTTTCAAAAGCTGTCTGCCCCCATCCCACCAATTTGACAGCATG
CTTGCATTCTGTCTCAACTGTAGAAGGTAGTACACTGGACATGATTGTGC
AGTGAATATTTTCAGACAAATTCTTCTTTTGGTTTGTTCTTGCCCATGTT
CGAATAGCAAACACGGGCGTACAAAAATTGTTAATACATAATTATACATA
ACCAGTGTCTGTAGGTCTAGATTGGTAGTACTATATAACATCATCCTTTA
CCTTTTGCGGTTCAATCTGGCATACTGACATGGCCAAGTTTACTTGCAAT
GGGTAAAAGGTGATAGTTTTATAAGTTTTAGTTGACTTGAGAACTGCTTA
CTATTTAAGCATGCAGTTCATTCAAACTAAGCCAATCCGTTGGCAGTTTT
ATCAACATTTTTGTATTCTGTGTAATCCTGCATAGATTATGTTAATGAGG
CTGTACTGGCAGTGGCTATGGGACATTGTCTTTTAAGTCTGAAACCATGG
TGGCAATAGCAGAGTCATATAGAACTTTGCATGCTTAATGTTAGAAGCAG
AACAGCAAAAGGAAAGAAAAATCTGATTGAAGTTCATGACACTGCAGATA
TGTCTCCCTTGTATGACTACTGTACTACAGACCTGTTTCAACCGTAAATT
TAAACACCGTGGATACTTCCTCTAACAAAATGAATGTACAGTTGTACCAA
ATAGCAGTTACTCAGGCAACTGGATATGATTTTGGAATTTCCAAATTTTC
AAAATCATATCCAGTTGCTTCAGTAACTGCTATTTGGTGTAGCCTATTAC
TTACTTAGACTTCGACTTAGAAGCTCCCACGTCGTGCGATGTATGAGGCA
GTCAGAAGATTATATCCTTTTACCTGGATGTCTAACCTTCATCAACAAAT
TTACAGTGGATTTAATGATTGACGCATTACTCTAACATCTCTGTCTCCCT
TTGTTTGTGGCCAGGTTTCGACACAGATAACTTGAACCCCGTTGTTTGGC
CCGGAGGCGAGACAGAATCACTCACCAGACTGGAACGGCATCTCGAGAGA
AAGGTACAGTAAAACTGGATAAACTTCTTTCTAATTTTGACAATTTATTC
ACTTGTCTTAGTCTTCTATTGAACCATCCTAAACTGTCATATCAATTCGG
TTTTGGTTTAATACCTGGTTCTCCAGTTCTTCCCTTTAGTCACTGACGAA
GGACAACGGATGTTGTCTGAAACGTCTGACTTTCAAAATTTCTTCCAGCT
GCTGGAGTAGCTGTCTTTTGGCATATCTTACTCCCTGGGAGTTTAACCTT
ATGTACCCAATTTGTAGATATCTTCTTTGTAGAATTTTTCTGTTAAAAAA
AGAATTCAAGTCTTCTATAAAGGTAAATGTTTTTCTGCAAAGGAAAAGGT
TTAGAATGAAGTTCCTTATTATCTTACATGTTAGAGGATTTAGTTTGCCT
TGATATGACTCCTATGACCAGAGTCATAGACAAATGTTAAGAAGGAATTT
CCAGGGCTGTCGAGTTCAGTCTCTTATGAATTATGAAGAGTTCTTCCATT
GCGAAGATTCAAATTTGCTGATTTGCTGACGAACATGAAGTGAAGTAGAA
ATTGTGTCAGTAGGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNTTAAACGGTGCACAGTCACCGCTGACGCACAAGCGTTT
GATAAAGAGAAATGTACATCAAACAACTGTCTTCGTCACAAAGTGAAGTT
AAACGGTGCACAGTCACCGCTGACGCACAAGCGTTTGATAAAGAAAAATG
TACATCAAACAACTGTCTTCGTCACAAAGTGAAGTTAAACGGTGCACAGT
CACCGCTGACGCACAAGCGTTTGATAAAGAAAAATGTACATCAAACAACT
GTCTTCGTCACAAAGTGAAGTTAAACGGTGCACAGTCACCGCTGACGCAC
AAGCGTTTGATAAAGAAAAATGTACATCAAACAACTGTCTTCGTCACAAA
GTGAATTTATCGTTTTTTCTTTTGCCCAGCATCATTGATGTGAACGTTGG
GCAGCCACCGCTGACATACAAGTGGTTACTTAAGAGAAATGTACATCAAA
CAACTGTCTTCATCACAAAGTGAAGTTAAACGGTGCGCTGTCACCGCTGA
CGCACAAGCGTTTGATAAAGAGAAATGCACATCAAACAACTGTCTTCGTC
ACAAAGTGAATTTATCGTTTTTTTCTTTTGCCCAGCATCATTGATGTGAA
CGGTGGGCAGCCGCCGCTGACATACAAGCGGTTCCAGGCTATCCTGTCCA
AGATGGACCCTCCAGACCAACCCGTGGACGCCATCACAGCAAGCACCGTG
GACAATCTGACCACACCCATCAGAGAAGACCACGACGAGAAATACGGAGT
ACCGTCTCTCGAGGAGTTAGGTGGGCAAAAGATTATTGACCTTGAACTTG
GGGCTCATGTGCCGGATTTGTGTTGCGTGTTGTTGAAAGTTTGCAGATTT
AAACTTCCTGGTGTTAGATATTTTATTGGAAGTATATTGAAAAAAGTAAA
AATCTATTTTTGTTTGCCATTTTTCAAAAGCTGTCTGCCCCCATCCCACC
AATTTGACAGCATGCTTGCATTCTGTCTCAACTGTAGAAGGTAGTACACT
GGACATGATTGTGCAGTGAATATTTTCAGACAAATTCTTCTTTTGGTTTG
TTCTTGCCCATGTTCGAATAGCAAACACGGGCGTACAAAAATTGTTAATA
CATAATTATACATAACCAGTGTCTGTAGGTCTAGATTGGTAGTACTATAT
AACATCATCCTTTACCTTTTGCGGTTCAATCTGGCATACTGACATGGCCA
AGTTTACTTGCAATGGGTAAAAGGTGATAGTTTTATAAGTTTTAGTTGAC
TTGAGAACTGCTTACTATTTAAGCATGCAGTTCATTCAAACTAAGCCAAT
CCGTTGGCAGTTTTATCAACATTTTTGTATTCTGTGTAATCCTGCATAGA
TTATGTTAATGAGGCTGTACTGGCAGTGGCTATGGGACATTGTCTTTTAA
GTCTGAAACCATGGTGGCAATAGCAGAGTCATATAGAACTTTGCATGCTT
AATGTTAGAAGCAGAACAGCAAAAGGAAAGAAAAATCTGATTGAAGTTCA
TGACACTGCAGATATGTCTCCCTTGTATGACTACTGTACTACAGACCTGT
TTCAACCGTAAATTTAAACACCGTGGATACTTCCTCTAACAAAATGAATG
TACAGTTGTACCAAATAGCAGTTACTCAGGCAACTGGATATGATTTTGGA
ATTTCCAAATTTTCAAAATCATATCCAGTTGCTTCAGTAACTGCTATTTG
GTGTAGCCTATTACTTACTTAGACTTCGACTTAGAAGCTCCCACGTCGTG
CGATGTATGAGGCAGTCAGAAGATTATATCCTTTTACCTGGATGTCTAAC
CTTCATCAACAAATTTACAGTGGATTTAATGATTGACGCATTACTCTAAC
ATCTCTGTCTCCCTTTGTTTGTGGCCAGGTTTCGACACAGATAACTTGAA
CCCCGTTGTTTGGCCCGGAGGCGAGACAGAATCACTCACCAGACTGGAAC
GGCATCTCGAGAGAAAGGTACAGTAAAACTGGATAAACTTCTTTCTAATT
TTGACAATTTATTCACTTGTCTTAGTCTTCTATTGAACCATCCTAAACTG
TCATATCAATTCGGTTTTGGTTTAATACCTGGTTCTCCAGTTCTTCCCTT
TAGTCACTGACGAAGGACAACGGATGTTGTCTGAAACGTCTGACTTTCAA
AATTTCTTCCAGCTGCTGGAGTAGCTGTCTTTTGGCATATCTTACTCCCT
GGGAGTTTAACCTTATGTACCCAATTTGTAGATATCTTCTTTGTAGAATT
TTTCTGTTAAAAAAAGAATTCAAGTCTTCTATAAAGGTAAATGTTTTTCT
GCAAAGGAAAAGGTTTAGAATGAAGTTCCTTATTATCTTACATGTTAGAG
GATTTAGTTTGCCTTGATATGACTCCTATGACCAGAGTCATAGACAAATG
TTAAGAAGGAATTTCCAGGGCTGTCGAGTTCAGTCTCTTATGAATTATGA
AGAGTTCTTCCATTGCGAAGATTCAAATTTGCTGATTTGCTGACGAACAT
GAAGTGAACTAGAAATTGTGTCAGTAGGCTTAAAGGATTGCGGAATGATA
ACTCAAGATTTATGTAAGTTGTGAAACTCAGAGTAACATCACTGGCTGTG
ATACTGTAAGACTGTTATCCTTATCTCTCAGTTCAACTTTCACGGCGGAG
AGCAGACATGTTTTGCACATATTAACAGGTCTATCCAGGAAAAAGCATTA
AGAGGGCATCTCTGACTTTAAGAAGGAGGGTTGTAACTGAGCAGAGGTTA
CTCTTCAAAAACATTTTAACCGTTTGACATTGAATTTAGATTACCTATAA
TTTGTCCGCCTTGCATTCAGAAGGACGGTCATACAAAAGATGTGAAGAAA
TGGTACAGACTGCTTTCTCTGCTTAGCTCTGTCCTATTTGGGAACGAGTA
TGGGAGGTGAACATACACCACAGCACTACCAGTGGACAGCCCCCTACTGT
AGTGACTGCGTGTTCCAAAGGCTATACAAACAGAGATGGGTACTGCCCCT
GTACACTAAAAGGTGATGGATGGATTTTGACGTAACCTAAAATTTTTTTG
TTCTTTTCTTTCTTTCCATTCAGGCATGGGTTGCGAGTTTTGAGAGACCG
AAGATGACGGCCACTTCTTTGTTAGCGAGCCCCACAGGACTCAGCCCCTA
TCTCAGATTCGGCTGCCTGTCACCCAGATTATTCTACAAGAAGCTAACAG
AGCTGTACAAGAAGGTGGGTAACCTTTCAGTTACCTTTGCATAATGATGA
TTTTATCCTCATGCTAAGAGGTATATAACTTTGATACAATGTAGTTCTCA
GACTGAGGTTTTTAACATTTAGATTTGTCTATTGGGGTTTACCTGATTTT
TGAAAGGATTGACATAACAGGTGACTATCACCTTTTCAAGGTGTCAACCC
GGACCAGACTGTAAGGTTTGAACCAATCACACTGTGAAGGACCCCTACTG
TTTTTGTTAAGTGTTGTGGGTTCTTAAATGTACTCGAGGTGTGGCTCTCC
TCAGATTTGTGACCTCCAGATTTATGTCTCATCTGAGAGGATTCCCCTAA
CTGACGCGTAGTACTCATTTTCACTTGATTAGAGTTAGAAAATAGATGGA
AAGTGCTTTTCCCAAGGGCACAACTCTAGGGCCTGCTAGGGATTTAAACA
CAGAACCAACAACCCTAACCACAACACCACCTTTCCACCATCAAACCAAC
AAATTGTTTCTGTTGCAGGTAAAGAGAAGCAATCACCCTCCCCTGTCGCT
GTACGGCCAGTTGCTCTGGAGAGAGTTCTTCTACACAGCGGCGACAAACA
ACCCAAACTTCGACAAGATGGTAAACAACACCATCTGCGTACAGATCCCT
TGGGACAAAAATCCAGAAGCGCTGGCCAAGTGGGCAGAGGTATTGTTCAA
CTTCTATCTTCTATGTTTTCGGTTGTGTGTATGTCTATCCGTCTCTCTGT
TTGTCGGAACAGCATAACTCTAGAATGCCTGGATGGATTGTCGCCATATT
TGATATGCGGGTAAGTCTTGATGAGACTTGGTTTCCGCCGCCAGGTAGTC
AAGTTGATTTCCGCTCGTGACGTCATTGTAAACACAGCAGCCAGTTCGGA
ACCTGGTACTCCCTGCTCAAGTACCCTTTTGGCACTGGGGAGAGGGTTAA
TGCATATGTCAGGGAACTGAAAGATGCTCTTAAGTATTATAAGTCCCTTC
TCCAATTCTTTTAGAACAGAATGATCCTTTTTCAGACTATAAAGATGTGA
CTGCTGATTCAGCTCAAGGACTGCATTAGGTCTTCTGCAATAGTGTAAAA
GCATTTTGTTTTTGACAGTTGAAATATTGAATTGTGTGGCTTTTCTGTCT
AAAGACTGTACCCCTCCCTTTCCAGGGCCAGACGGGCTTTCCCTGGATAG
ATGCCATCATGGCGCAGCTGCAACAGGAGGGGTGGATCCACCACTTGGCA
CGGCATGCTGTGGCCTGCTTCCTAACCAGAGGGGACCTGTGGATCTCCTG
GGAGGAGGGCATGAAGGTGACCTTTGCTCTCTTTCTTGTAGTTTTTGTAG
GATCATGTGTTGATGTGTTCAAAAATTTGTATTTCCCCAGAACCATAGTA
AAATGGAACTTGTTGTCATCAAGTACTGTAGGAACATCTTCACTGAATAT
CTTTAAAGAATGGTTGCAGTCAGATGTGCAAAAGTTAGGTGTGACAGGCC
GTTCAGTGTAATATAACCAGTTGCTGTTGTGCCGCGTGCCTGAGAAGCTG
GTGTGTTACGCCGAAGGNNNNNNNNNNNNNNNNNNGACAAAAAGTTGAAA
GCATGTCCTCTAAGTTAGGTTTGAACAGAAGGCTTGCATAGATGATGCTA
TTTAAAATGAATAATTTATCCACATTCTTCCCCCTGCTGTGATACTGTTG
TAATGCCCGTCGTGTCCGTTCTGCTGCCGAGGTGTTTGAGGAACTCTTGC
TGGACGCAGACTGGAGCGTGAACGCTGGGAGCTGGATGTGGCTGTCCTGC
AGCTCCTTCTTCCAGCAGTTCTTCCACGTCTACTGTCCCGTCAACTTCGG
CAGGCGGACAGACCCCAACGGAGACTTCATCAGGTCAGTAGCTTAGTTTA
AAAAAAGTTATAGTCCTCCCACACCATAAGGTGTATAGGGCGGAGTCCAT
GTCTGTTTCAGTAGCCCTGGGGGCTAGTCCACTGGCAGTGGAGTGTTTCA
GAAGTATGTACCACTTCTATAAAGTCTTTGGTATGACTCGATGCACCTCT
TATCCGGACTGTTCACACCCAGGTGCAAACTTGGTATCTGTCAGTGTCTA
TTGAGGCCATGACAGAATAGACTGTCTACAAGGCTCTACGACGACTCTTT
TTACATTTTTACTTTGCTATTTTACGCTGCCATTTTTTGTGTCCACAAAA
CATATCATCAGAGGACTTAGTGATGTTTTGGGTAAAAAAAAAACAGGAGT
TTAAAAGTTTATGGTTGTGTTTTGTGTACAGGAAATACCTCCCCAAGCTG
AGAGGGTTCCCCGCCAAGTACATCTACGACCCGTGGAACGCACCGGAGTC
CGTGCAGAAGGCAGCTAAGTGCATCATCGGTAAGCCACCGTTCTGTACTT
TCGTGTCAAGAAATTGGCAAAGACCAGATCTGAAACCTCCGTCAGAAGGA
GTGTTTAAAACAAGAAACATCTCTACCACTCAAAAATCATGACCATAGCA
TGTGCATGACACAAGATATCAAAATTGAAAGTATTGCTGCACTACTATAG
AAAGCTGTTCATTATCGAACTCGAGACCTTCGTTTTTCCTACACCTAGCC
ACCGTCATAAAGATCTATCCATGACTTCTCAAGTTATGCTGTCCATAAAC
GCACAAGCAAACCATATGCAACCACAAATGGCACCAAAAACATAGTAACC
TTCTTGGTGAAGGTAGTATCAAGTAGAGTGGATTCATTCCTCAAGCTAAC
TGACATCTTTCTCGACACAGTCGTCCCACAGTAAGACATCTGGAGCAGCA
TTGTTCCCATTTAGAACTTCCAGACCAGCTTCTTGGCGAAGGTAATCATG
TTTACTGCTTTACCTTACAGGGAAAGACTACCCGCTGCCGATGGTCAACC
ACGCAGAAACCAGCAGAATCAACGTGGAACGTATGAAGCAGGTGTACCAG
CAGCTATCACGGTACAGGGGCGCAGGTAGGCAATGTAAGACCGCTTCTTA
CCTCACATAGGACACTCCCTGGAAAACCTGGAACTTGGAGATCTCTAATG
GTTAAAGATTAGGTAGTTATCTGAAAGGCTAAATCCTTAGGCCAGCAGCT
ATCACGGTACAGGGGCGCAGGTAGGTGATGTAAGACCGCTTCTTACCTCG
CGTAGGACACTCCCTGGAAAACCTGGGACTTAGAGATCTCTAACGGTTAA
AGATTAGGTTGTTATCTGAAAGGCTACTTGTAAATCCTTAGGCCAGCAGC
TGTCACGGTACAGGGGCGCGAGTTGTTATCTAAAGGCTAAATCCTAAGCC
AGAAACCAGGGTATGGGTAAAAGTTAGTCTGTTTGTTTTTTCACGTAGGA
TGCTTCCTCAAAAAACTGGTAGGAAGGGACTTGGAGATCTCTGATGGTTA
AAATTTAGTGTTATGTGAAAGCCTGTAGCCTATGTCAGTGTTTACTAGCC
TAAAAAACTCAAGCAATATTCTACTCCACTGCAAAATCCTGTTACTAATG
TTAGCTTACTCTGCAGGAGTTAAAATCTTTCATACTGTTAGCATTGAACT
TGAAGAATTTGACAGAGAAACCTCAACATATGGTCAAATTGAAGCTTTTG
TACCAGCTCATATCTGTGAGCTTGTCAACAGCCTAAAAAAAGGTTCGAAA
CGCGACATAGTTGCATAGACACTTATATAATCTGTCTCAGTAATGGAAGA
AAGCCAATAGTTTGAGGCATCAGCCAAAGATTAATAATTAACAACAAGAT
GCGGGGGGAACTATGCATTGTGGTTCATAGAATAGGAGATTATCTTTTTG
AGGCATTTCTTATTTTTGTGACATTCTTTAGAGGCAGAAAATAGTTTGGT
CACCTTGAATGGCTGGTTCCGTACTGATTTGTGACGTCACAACAGATCAA
AAATAGGTTGTTTGACCTCCAGAAACAGATAAAACCCAGACAGTGTTGGA
ACTATGAAGGGAATCCTGATAAAAAGCTATTTCTGGCAAGCTGTGACGCT
TTTGAGATAGTGACTCACGTCAGCAGTAGCACTGCGTCCTCCACCTGTAA
AGTTCAAGAAGGGGTTACAACAAGGGGTCAACAGATAAAAGCTAAGAAGA
CGAATGTCCAGAAATCCATCTTACCCTTTATGAATCCTATATTTTCAACA
TAGATGAATAAACCATAGTAACTAAACCTCAACTAAAGCAGCATTGCAAC
AGCTTTGACCTATCTTGCAGCAGTACAACATTGGTTGTTGTGAACAGTCC
AAATTTAAGGGCACTGTGTTGAAAGCACAGTTTTAAAGGTTGTTTGGAAG
AAAAGGTTTTCCTCTATGATAGGATGTCATTATTCCTCTCCTAAAGTGTT
TAGTTTTGATATTGTCGCCAGATTTCTAAATTCCCAACTCAACTGATGGG
TAACACCCTATACAATGTATATATAGTGAGTGAGTGAATGAATGAATGAG
TGAGTTCTGGCACCCCAATATTCCGACATCGTTATGTTCCGACACCTTAC
TATATAGGGGTGTTGGAACATAGGGACATCAGAACATAAGGGTGTGGGAA
CCTAAGGGTGTTGGATGTCGGAACATAGGGGTGTTGGAACATAACGGTGT
TGAATAATAGGGCTTGTCCCCAAAATGGTTTTGTAGGTTTTGTCCAAAGT
ATCTTGGCTAATTCAACGGTCTCCTCCTAGGTCTCCTGGCCACCATCCCT
TACCCAGACGGAGGGAACGGGAACCCGACGGGGCACAAAAAACATGCCCT
AGTACAGAGAGAGATGGAGAGACAACACGGCGAGAGAAGAGAACACGGAC
AACCGTCGCACGTAAGTACACAACCACAGTTTCTTCTTTTTACATGTCTT
GTTCCTTTGGGAGTGACAAGGTTTCTTTCATTTTGTAGGGCTCCAAACTA
GGTGTGTTTCTTTCTGGTTTGGAGCTATCAAATTATTTGCTTGAATTTTT
TTTATCGAAACAGGATAAACAAGTAGCTCAAGATTGCGAGAACATTAACT
ATATTCTGTCGATAGTTTGGAGCCCTGTTTGAAGTTGCCTTTGTCGTGAT
GACGTATGTGCTTGCTGACTGTATTTTGTTTGAATTCACTGTTGGAAACT
GAAAGCACGCTAGTAGTATTGTATGTAGGGTTGGACAAGGCCATGGGCCC
GATCGCCTCGGGCAAGTCAAAATGCTGATCGGGCAAGTGCATGTCATTCT
GTATTTGCCCGAACAGGCAAGTGTGATTTGGATAAGAAATTGGTCTACAG
GCCTGACAGTTGCTTGAGTAACTGTCATTTGGCATATCTTATTACCTGGA
TGTCTAACCTTCATCAACGGACCATGTACTTGCCAGTGAATTTTTGAATA
CTTGTCCAACCCTGGTATGTGTTAGATGCATTGTGTTGTGTTGTGTGTGG
GGCTGTGATTGATCGCAATGTCCTGTCATTGCAGATGCCATTGTTAAAAC
GGCGCAGGTGGGATTTCCACTTCCAGGTTTGTGTTTAAGGCAAAGAAAGA
AAGAGACAGTGAAACGGTCTTGGTTAAAGCTGGGATTTTTGCTATTTTGT
TTCACCTTGCACTAAAGCATGTTTTTTTAATCATTGTTGCACCAAAGCTT
TTTTTGCATTGAAAAGTCTCATGGAGGGGATAGCAAAGCTCAAGAACTAA
TACGGTGATGGGACTGAAATGACGAGAGGGAATAAAAAAATATTCCTGAC
CACCCCTTCCTGAGATCTTAAAATGGTATGTCCCTTCCAGGGAACAACTG
ATTTCCTTTCAAAATCAAATATCCAGATTAAACCTGTGCCCTTCACCCAA
ATTGTGGGCATATTTCCATAAAATTCCAACTTTTCCCAATGCTTTTTGAC
TGCCTTTCCATGTACTGGTTGTAACTTACTATATAGTATCGCCTGGAATC
CAAATCATATTGATCAACAAACCTTGTGTTTGGTACATTTTACTAACTAC
GAAGAAATTTCTCATGCATGAGTTCAGCCCTGAAGTTGGACTGGTCCAAT
ATGCTTCAGACTAACATTCATTCTGGTCCATGGAAATTTAATGTTGTGTT
TCTATTTATGGTCCTGAAAAAAATTCAGGGTTGGTAGCAGGGCTGTCTCC
AGCCTTTAATTTTTTTCCGTCCCACTCATTGTTTGAGAGCCACTCGTTAA
ATTCGTCGTTTTAAGCTTGTGAAGATACGTTTTTATCAATTTCATGTCAT
AAAGTTCAGATTTTGGGACAGACAAGGTTATATTTTTTCCGTCCAAATGA
GTAAATTTCCATCCCGGGATGGAGAGAAGGGTCCTTGAGACAGCCATGGT
TGGGAGGCAGGGATTGTCATGTCAGATCAAAAATTTTATATCCCTTCCTA
GCGCTCAACCCCCCCAAAAAGGCNCTTGCTAGCGCCTGACCCCCCCAAAA
AGGCTCGGGCTAAGGTTGTTTGGAGAACCAGAAACACAACATTTTTTTCC
TTAGGCCTTGCAGCTTTCCTGCCCATAAAAGGAAGAACAAGAAGGAATGT
TGTTATCAAAGTTATTTGAAGACAAATAGATATTGCTCTGGGAGATTGAA
AAGATGCAGGAGAAAATTGTTTGAACTGTACAGCTGAGACCTACAAAATG
TACAAATATTGTCACAGGGCTAAGCCATACAATCCGTCGTGGTCTGCCCC
AGATTCCTTGCATTTTCAATTTTATGATTATGAATTGAGGGCTCGAAATA
GTGTTTACATGTATATATGCACTTTTATGCACCCAAAATTGGAGCTGTGC
ACCTAATTTTTGACTGTGGGTGCACCGGTGCATCTAGATATTTGCGTAGG
GTAACATAAGGCATACTAGCATACAGCATATTGTTTTTGTTTTTCAAATT
CAATTAAATTCAAAGTGTCAGCAAAAATAATAAGAAAACCTTTAGTGTGT
TAGTCTATTTGTTTAGAATTCTGAAGTTACAAAATGTAGCTATGAAATTT
GGGCTGTGCACCCAAATTTATTTCTGTGTACCTAGATGTTTTGGTTAGGT
GCACTTTTTCCGAAAACAACTTTCAAGCCCTAATGATTGATGTAGTGTGA
ATGGTTTATTATCAATGAATTGAGAAGACTGTTTATACAGCCCGTTATAT
AAACCCGAGTCGTGATNACTGCAAAAATAAGTGAATTTACAGTACTGCAC
TTTTGGCCCAGTCTGTCTCTTGACCAATTAGATTACGGCATTTAACACTG
GCTTGGTGGGTAATTTGTAAGGAAGGCATTGATTGACTGCAAACTAAGTT
ATGTCAAATAAGGCAGGCTCTTGAATATTTAAGATTGTAAGTAGTACAAG
CAAGTTGATTTGTCAAGGGTGGTAATACAGCATGTACTGTCCTGGGCCCT
GGCAAGGGAGGATATATGGTATCATTCTGTAAATAGAGCTTTAAAGTTTT
GTCAGTTATATGACCTCTTTAATGTTTTATTCTTTGTAAACAATAGATGG
GATAATTAAACCAACTGACAGAGGTCCAAGAAAAAGATGGGTGTTGTACT
ATTTTATTGTTGTACAGGTTGTGTTCAGGATTAGAAAAAAGATGCCTAAG
AGGCGCGAGAAACATGTGAGGACCTTTGATGTTGTCAGAAAGATTCTATT
TTTTGTATGAGATTGATGAATATGTGGGGAAACATAACGAGCATAGGAAG
TGCTTGTGTTTGTACACTATGAAGTGGCATCACTGTAAAAGACAAGCAGT
ATTTTAGGACTTGACGTTTGTGTTCTTGTAGACAAGAACTTGCACACAAA
ACCCTACATGTTCTGTGTAGTTTTGCATATTTAAATGATTCATGACAATA
GAAATTCTTTGGGAAAGCCTTCCAATCTTGTGTTGAAATTATGTTGATAT
TGCTTCTGTAACTAGTTTAAGAATACAGTTGACTCCTTGTACATACAAAT
CTGTATCCAGTATGGGTATTACCGTAATTTGATGTTGACTGTTATATCAT
GTTGACTATATGATGACACAAACATGCAAAAGGTGGTTCAATTAGGATTA
TAAGGAAAACACAGTGAAAAAATTTCTATTATTTCTGCACCATATGGTTT
CCCCAATTGTATCAAGTTTATGGTTTGATTTGACAAACATAAGTTATTTA
CTACGCAAGGTGATTTGTTTAAAAAAGTTTTTATCATAGGTTGCAGCTGA
TCAGACCTGCATGGAGGTTCTACCAGGTTGCTTTGGTTGTCCATGTAGAT
GCAGAACCACAATTTTGCATGTTCACAGGTTGCTTCAGTGTAATTCCATT
CTCCAAAATTATATACTAGACGTCAAACTCTAAAATTATCATCATGTATA
CAGCCAGAGAATCAGTCTGGCACTGGTAGCTTTAAATTTGAAAGAGTATT
TTCGAAATTCTGAGGGCACTATATTTTGAAGCCCAATAATATTTCTACTT
GTTGGATATATCATTAAGTTCCACGGGTTATTTTATATAGTGTGCTTCCG
TCTTTTTCATGGCGTGACTTTATTTCTGTAGCCGGATAGACTTATCCAAA
TCCATTGTCTTTTCAAAGTTAGATTGACCAGTGTCATAACTAATGTGAAG
CAATGGATGCTTTGGGGTCTTTTTTAGTGCAACCGGTTTATTTGTTTGTG
GACAACCATTGTTGTTGCTGTCTGAAAAAAATGTATCTAGGCACAACTGA
CTGCAATAATTGTGTACAAGTGAAATATTTTGGGTTTGAACACTGTTTTG
TATCATCTTTTTTTGTGTCAGGAAGTCATTATAATTTATGATACACTACA
AAATGGGTTTTGATGTGTTCTTGTGACTTAGTATGTGTGTGTGTATGTAT
GTATGTGGAAGGGGGCATTTGGCCAGCACAATAGTTCATTTTTTTACTAA
AGAACTAAAGCCCTCAGTTATAGTAGGATATCTTAAACACATTGAAGATA
TTGCTTACATACAATCAATGTCAATTTGTACAATTTTTATTTGATGATGA
CAAAAACATTACATTTTTTCTGGCAAATTTGTTACAAATTTGTACATTAA
TTATTACAATTTATTCACTTGAAACCATTTCGAAATATAGCACTCAAATT
AGGTGTTGGCAACTGGACAGAATGTATTTTGTTTCTAATAACAAAATTTA
TTTGTATTCTATGAATCTTTAATGTACTTCTATTTTTTCTTCCCATCAAA
AAAAAGGAAAAGTTAATGAATAAGACATTTTGGTTCACTCTTTTTAGAAA
GATTTT

Coding sequence (CDS) from alignment at Sc0000231:47758..66363-

>BlTCONS00113909 ID=BlTCONS00113909|Name=BlTCONS00113909|organism=Branchiostoma lanceolatum|type=CDS|length=1236bp|location=Sequence derived from alignment at Sc0000231:47758..66363- (Branchiostoma lanceolatum)
CTGACATACAAGCGGTTCCAGGCTATCCTGTCCAAGATGGACCCTCCAGA
CCAACCCGTGGACGCCATCACAGCAAGCACCGTGGACAATCTGACCACAC
CCATCAGAGAAGACCACGACGAGAAATACGGAGTACCGTCTCTCGAGGAG
TTAGGTTTCGACACAGATAACTTGAACCCCGTTGTTTGGCCCGGAGGCGA
GACAGAATCACTCACCAGACTGGAACGGCATCTCGAGAGAAAGGCATGGG
TTGCGAGTTTTGAGAGACCGAAGATGACGGCCACTTCTTTGTTAGCGAGC
CCCACAGGACTCAGCCCCTATCTCAGATTCGGCTGCCTGTCACCCAGATT
ATTCTACAAGAAGCTAACAGAGCTGTACAAGAAGGTAAAGAGAAGCAATC
ACCCTCCCCTGTCGCTGTACGGCCAGTTGCTCTGGAGAGAGTTCTTCTAC
ACAGCGGCGACAAACAACCCAAACTTCGACAAGATGGTAAACAACACCAT
CTGCGTACAGATCCCTTGGGACAAAAATCCAGAAGCGCTGGCCAAGTGGG
CAGAGGGCCAGACGGGCTTTCCCTGGATAGATGCCATCATGGCGCAGCTG
CAACAGGAGGGGTGGATCCACCACTTGGCACGGCATGCTGTGGCCTGCTT
CCTAACCAGAGGGGACCTGTGGATCTCCTGGGAGGAGGGCATGAAGGTGT
TTGAGGAACTCTTGCTGGACGCAGACTGGAGCGTGAACGCTGGGAGCTGG
ATGTGGCTGTCCTGCAGCTCCTTCTTCCAGCAGTTCTTCCACGTCTACTG
TCCCGTCAACTTCGGCAGGCGGACAGACCCCAACGGAGACTTCATCAGGA
AATACCTCCCCAAGCTGAGAGGGTTCCCCGCCAAGTACATCTACGACCCG
TGGAACGCACCGGAGTCCGTGCAGAAGGCAGCTAAGTGCATCATCGGGAA
AGACTACCCGCTGCCGATGGTCAACCACGCAGAAACCAGCAGAATCAACG
TGGAACGTATGAAGCAGGTGTACCAGCAGCTATCACGGTACAGGGGCGCA
GGTCTCCTGGCCACCATCCCTTACCCAGACGGAGGGAACGGGAACCCGAC
GGGGCACAAAAAACATGCCCTAGTACAGAGAGAGATGGAGAGACAACACG
GCGAGAGAAGAGAACACGGACAACCGTCGCACATGCCATTGTTAAAACGG
CGCAGGTGGGATTTCCACTTCCAGGTTTGTGTTTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113909-exon-Sc0000231-1564993656:66357..66363BlTCONS00113909-exon-Sc0000231-1564993656:66357..66363Branchiostoma lanceolatumexon
BlTCONS00113909-exon-Sc0000231-1564993656:65808..65956BlTCONS00113909-exon-Sc0000231-1564993656:65808..65956Branchiostoma lanceolatumexon
BlTCONS00113909-exon-Sc0000231-1564993656:58197..58285BlTCONS00113909-exon-Sc0000231-1564993656:58197..58285Branchiostoma lanceolatumexon
BlTCONS00113909-exon-Sc0000231-1564993656:56950..57090BlTCONS00113909-exon-Sc0000231-1564993656:56950..57090Branchiostoma lanceolatumexon
BlTCONS00113909-exon-Sc0000231-1564993656:56275..56445BlTCONS00113909-exon-Sc0000231-1564993656:56275..56445Branchiostoma lanceolatumexon
BlTCONS00113909-exon-Sc0000231-1564993656:55648..55788BlTCONS00113909-exon-Sc0000231-1564993656:55648..55788Branchiostoma lanceolatumexon
BlTCONS00113909-exon-Sc0000231-1564993656:55081..55232BlTCONS00113909-exon-Sc0000231-1564993656:55081..55232Branchiostoma lanceolatumexon
BlTCONS00113909-exon-Sc0000231-1564993656:54585..54682BlTCONS00113909-exon-Sc0000231-1564993656:54585..54682Branchiostoma lanceolatumexon
BlTCONS00113909-exon-Sc0000231-1564993656:53989..54093BlTCONS00113909-exon-Sc0000231-1564993656:53989..54093Branchiostoma lanceolatumexon
BlTCONS00113909-exon-Sc0000231-1564993656:52153..52283BlTCONS00113909-exon-Sc0000231-1564993656:52153..52283Branchiostoma lanceolatumexon
BlTCONS00113909-exon-Sc0000231-1564993656:47758..51529BlTCONS00113909-exon-Sc0000231-1564993656:47758..51529Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113909BlTCONS00113909-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000231genomeSc0000231:47758..66363 -
Properties
Property NameValue
GeneIDBlCUFF055834