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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000231:24354..28206- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113899 ID=BlTCONS00113899|Name=BlTCONS00113899|organism=Branchiostoma lanceolatum|type=mRNA|length=3853bp|location=Sequence derived from alignment at Sc0000231:24354..28206- (Branchiostoma lanceolatum)
ACAGCGACAGATCACGCTACTAACGCTAGGTAAGAACGACAGCGACAGAT
CACGCTACTAACGCTAGGTAAGAACGACAGCGTCAGATCACGCTACTAAC
ACTCGGTAAGATACACTGCGGATGAAAAAATAAAGTATGTTACTAGTCTT
CATTTTTCTCTGTCTAATTTGTTTGATTTTTTTAAATCCTTATGTTACAA
GTACAGTCAACAATTGTGAGAAATTATCTAAGGGACCTCCCAAAAGTGGT
CACATTTGCCAGGTGGTCCTTATGTAGAGGTGGTCATTTGTACCGATTTG
ACTGAATTGTTCTTATATGTAAATGTATTTTTATACACTGCAATCCTTTC
TGCTCCATTCCTTTGGGACAACAATGGTACGATCTTTGGTTTGGAACAAC
TGAAAATGACCAGGTGCTACAGATTGAGCTACAGGGACATTTCTTATCTA
GTTGCTTGTTTAATTTTGTATTGCAAAATGTTCTACCAGGATGTCTAGCA
TTCATTGATGTACTCCATGGTTTTCTGTATCAGAGTTAAACTGCAATTTC
CAACACAAGAATTTGGACTTATACCCAAATTTTTGACTGATCAACTCCAG
TCCTTATCAAGGAATGAGCAATCCACTGTCTCTGTGACGTCACATTATGC
AGATGTGACACGTGACTCGGTGAGCAGTAGACTATATGTTGAAGAAAGTG
TATGGCCTCCACCAAGCCTTTCTACGGGCGTATGGATCATAGAATTCGGC
AGAAAAAGGAAGAATTAGCCAGTAGAGTCAGTCCACGGCGAAGATCACAT
AACTGTGTGCCTGCGAATGAAACCCTTCGGTGGCCAAACTCCCCTGGCAA
ATGTTCTTCCCACAGCCGGCGTGGTTAGTCTGGTAGAGACTGTCTCTGTA
AAGCCTGGATATTTGTTGTTTTTCAGAGGGAAGAGAGGATGGAAGCAGCA
CCAGTACTGATGGAGCGGGCAGGAAGAGGAAACGACCAATCCACCCAGAG
GGCGAAGACGAGATCGTGAAAGTTGTAGTCACCACGGCGTTGTGAGACTC
CGGCAAAATGTTCTGTTCTTACCTCTCACGTTATCTGTAATTGTTTCTGT
GATTCCAATAATCAAGGAATGAAATTCAGTTCTGACTTCTCAATGTCTTG
TCTGAAATCTGATTTTTATACAGGAAAACTGGTGATAAGAATGGAAGGGT
ACATGAACGGCATTCTGTTCTTACGTCAAGTGTGATAGTTTGTGTCAGCT
TTTAGCTAGCAGGGCGTCATGGTGTCTTCTGATGACAGATTTAATCACAA
AAATTAACAATATGGGCTCCCAAACATTGAGTTGAATGCAAAAAAAATTA
AAGCTGGAGATTGCTCTGGGCAAAACGTTCTGTTTTTACGTCAAGTGCGG
TGGATTTTGTGATTGTACTCATTGCAATGATCAAGGAATGTAATTCAGTT
CTCTCTTCTCAGTGTCTTGTCCAAAATCAGATCTTTATACTAGATTATAG
TTGAAAACTGGTGATAGGAATGGAACGTTCTGTTCTTACTTCTTACACTA
AGTGTGATCAGTGTTTCTGTGATTGTACTCATGACAATAATCAAGGAATG
AAAGTCAGCTCTCTCTTGTCTTCTCTGAAATCTGATTTATATAGTTGAAA
ACTGGTGATAGGAATAGAAAGTTTAGTCGGTAAAACGTTCTGTTTGTTCA
TCAAGTGTGCTGGTTTTTCTGATTTTTACTTTTACAATAGTCAAGGAATG
AAATTCAGTCCTCACTTCTCTGTTTCTTGTCTGAAATCTGATTGTGTTTT
TGTTGAGAGGATCAAATTTAGAATTGAAGACGAAAGTGGTCTCATTTATG
ATCTTCTCATTGACTTTTTATAAAGGAAAACAGGTGATAAGAATGGAAAG
TTTGGTGATACATTGCAGAATATATCAGGATACATGTACTTATTTTTAGT
GTACGACTTGTTTCAAATACAGGATGTAACATTTGAGCTAATCGGTCCTA
TTTATCAAGCCCACTGTCGCCATTACAAACAAAAACTGCTCACTCACAAG
TATTGTATTGTCGTGCAAGGTGTGGATTTTCAGGGATCGTAGTGGGATTG
TCTAAGGTAGATTAATTCTTACATATTTTTGAATGCTAAATGTATTGAAA
CTCTTTCCTTCTTGAACCCAGGACTGTCTCCAGGACCCGTCCCTCTGTCC
TGGGACAGAAATTTGCTTGTTGGGATGGAAAAAAAATTAATCTTGTCTAT
CTAAAAAATCTGATATTGCTGGTAAAAATGTATTTTTCACAGCAATGACA
GATCTAACCATATTTAAAGCTGGAGACAGCCCTGTTTTAACCTGATCTCA
TTGTTTGTAGACAATCATGAACAGTTTAAAGATCAGAACAGTTTAAAGAT
CAGTCATCATATTGTGTAATGTAATGAAGTGATGACGATGTGAATGTCAT
GATCACTTGTTTGTACAATATTTGTAGATGCCAGCTTTACAGACCAAAAA
CATCGAAGAGTGACGACCAGAGGAGAAACCTTCAAACCTCTATCAAAGAA
ACGCACAATTGTTGTCAGTCAGGGTCGGTCAACATTGTACATATTTGTCT
GTTTTTGATGGAGCAGATTTTTAAAAAGACTTACAAACTTGGACAAATCA
AACTGATAATCAGAAACCTAAGATTCCAGTCCAAGTTGTAAGGTAAATGT
GTTGTGTAAGTATTGAAAGAATATGTATAATTATGATTATTTGGTTGACA
GTTAACTTGTTTTCTCTATACATATTTCATGTGTAACAGTTGAAAAGAAA
TATCTGTCATGAAATTCAGTGGGTGAGGGCCATACATCAAAATACCTTGT
GTTTGATCAATTGAGCATGAAGCACTTTTAGTGTGAGTTTTACAGTTTTA
CAACTTGAACATTAATGTAAGTCTGTAGGATATTTGACTGTATTTGCCAA
CAGTACAAAATATTGCAAAGCCAACTAATTGAACAACTTCTCTAGACACA
AGTGTACTTGAACCAAAAGCAATGGTCAACAATACTGTAGTTCAGTTCTA
CCTCAGAGCTCGTACAAATACAACAAGTAGTCAACAGTTATAAGGAACGC
AAACAAGTTCAATGTATATATATATTTATATATATATGCTAGCAACTGGA
ATGTTGTATTTATACTTTGTAATTTTGTGGGGAACATTGATGGCAATACT
GTTAGATAAAGACGCAAAGCTGTTGAACAAAACTTAAGTCATAACAGAAC
ATTTTAACTTAACTCTTCTTGATCAAAGCACTACTTTCATCAGAACTCCA
ACCATGCATGTGTTTGTGTCACTGTTTTTTCACCGCATATTGAATTAACA
TTGTTTTAAGGATACAGTGAATTATGTACTGATAATTGGTTGAGGAATAC
TAGTGTTAATGTGTTGGTTAGTATTTCAATGTTATGAAAGTGCTCTCAAA
TTATGCGGAAGTCATTGGTAGAAGTTATAATGAAGACTGAATCATTTTTA
ATGAGGAATGGAATGTTAGCCTGCTTCCAACCCTATTATAGCTTCTGACT
TTCTTTCATCCTCGCAAAGCGAAGACAAAAGAGACTCGGCATCTATAATA
GGTTTGGATACCAGGGTATGAAGTGTAATTTTCACTCTTGTAAATGTTGT
GTCACAAAAATGACCTGGTAAAAGACTTGCAAGGCCTTTGAATAGTTCCT
CCGAATGGCTGAATTTTATAACAGATGATCAGGAATGACATGGTCGAAGA
AGAGTTGATGTTCTCCAAACAATGGAGACTTGTAACTATGTGGCAAAAAA
TAAAGTTTCCCACCAATGACTTGTTTGTTTTTTGTGTGTGTTATATTGAG
TGG Coding sequence (CDS) from alignment at Sc0000231:24354..28206- >BlTCONS00113899 ID=BlTCONS00113899|Name=BlTCONS00113899|organism=Branchiostoma lanceolatum|type=CDS|length=357bp|location=Sequence derived from alignment at Sc0000231:24354..28206- (Branchiostoma lanceolatum)
CAGCGACAGATCACGCTACTAACGCTAGAGGGAAGAGAGGATGGAAGCAG
CACCAGTACTGATGGAGCGGGCAGGAAGAGGAAACGACCAATCCACCCAG
AGGGCGAAGACGAGATCGTGAAAGTTGTAGTCACCACGGCGTTATGCCAG
CTTTACAGACCAAAAACATCGAAGAGTGACGACCAGAGGAGAAACCTTCA
AACCTCTATCAAAGAAACGCACAATTGTTGTCAGTCAGGGTCGGTCAACA
TTGTACATATTTGTCTGTTTTTGATGGAGCAGATTTTTAAAAAGACTTAC
AAACTTGGACAAATCAAACTGATAATCAGAAACCTAAGATTCCAGTCCAA
GTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113899-exon-Sc0000231-1564993656:28178..28206 | BlTCONS00113899-exon-Sc0000231-1564993656:28178..28206 | Branchiostoma lanceolatum | exon |
| BlTCONS00113899-exon-Sc0000231-1564993656:27166..27280 | BlTCONS00113899-exon-Sc0000231-1564993656:27166..27280 | Branchiostoma lanceolatum | exon |
| BlTCONS00113899-exon-Sc0000231-1564993656:24354..25729 | BlTCONS00113899-exon-Sc0000231-1564993656:24354..25729 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000231 | genome | Sc0000231:24354..28206 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055833 |
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