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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000231:24354..28173- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113898 ID=BlTCONS00113898|Name=BlTCONS00113898|organism=Branchiostoma lanceolatum|type=mRNA|length=3820bp|location=Sequence derived from alignment at Sc0000231:24354..28173- (Branchiostoma lanceolatum)
GAACGACAGCGACAGATCACGCTACTAACGCTAGGTAAGAACGACAGCGT
CAGATCACGCTACTAACACTCGGTAAGATACACTGCGGATGAAAAAATAA
AGTATGTTACTAGTCTTCATTTTTCTCTGTCTAATTTGTTTGATTTTTTT
AAATCCTTATGTTACAAGTACAGTCAACAATTGTGAGAAATTATCTAAGG
GACCTCCCAAAAGTGGTCACATTTGCCAGGTGGTCCTTATGTAGAGGTGG
TCATTTGTACCGATTTGACTGAATTGTTCTTATATGTAAATGTATTTTTA
TACACTGCAATCCTTTCTGCTCCATTCCTTTGGGACAACAATGGTACGAT
CTTTGGTTTGGAACAACTGAAAATGACCAGGTGCTACAGATTGAGCTACA
GGGACATTTCTTATCTAGTTGCTTGTTTAATTTTGTATTGCAAAATGTTC
TACCAGGATGTCTAGCATTCATTGATGTACTCCATGGTTTTCTGTATCAG
AGTTAAACTGCAATTTCCAACACAAGAATTTGGACTTATACCCAAATTTT
TGACTGATCAACTCCAGTCCTTATCAAGGAATGAGCAATCCACTGTCTCT
GTGACGTCACATTATGCAGATGTGACACGTGACTCGGTGAGCAGTAGACT
ATATGTTGAAGAAAGTGTATGGCCTCCACCAAGCCTTTCTACGGGCGTAT
GGATCATAGAATTCGGCAGAAAAAGGAAGAATTAGCCAGTAGAGTCAGTC
CACGGCGAAGATCACATAACTGTGTGCCTGCGAATGAAACCCTTCGGTGG
CCAAACTCCCCTGGCAAATGTTCTTCCCACAGCCGGCGTGGTTAGTCTGG
TAGAGACTGTCTCTGTAAAGCCTGGATATTTGTTGTTTTTCAGAGGGAAG
AGAGGATGGAAGCAGCACCAGTACTGATGGAGCGGGCAGGAAGAGGAAAC
GACCAATCCACCCAGAGGGCGAAGACGAGATCGTGAAAGTTGTAGTCACC
ACGGCGTTGTGAGACTCCGGCAAAATGTTCTGTTCTTACCTCTCACGTTA
TCTGTAATTGTTTCTGTGATTCCAATAATCAAGGAATGAAATTCAGTTCT
GACTTCTCAATGTCTTGTCTGAAATCTGATTTTTATACAGGAAAACTGGT
GATAAGAATGGAAGGGTACATGAACGGCATTCTGTTCTTACGTCAAGTGT
GATAGTTTGTGTCAGCTTTTAGCTAGCAGGGCGTCATGGTGTCTTCTGAT
GACAGATTTAATCACAAAAATTAACAATATGGGCTCCCAAACATTGAGTT
GAATGCAAAAAAAATTAAAGCTGGAGATTGCTCTGGGCAAAACGTTCTGT
TTTTACGTCAAGTGCGGTGGATTTTGTGATTGTACTCATTGCAATGATCA
AGGAATGTAATTCAGTTCTCTCTTCTCAGTGTCTTGTCCAAAATCAGATC
TTTATACTAGATTATAGTTGAAAACTGGTGATAGGAATGGAACGTTCTGT
TCTTACTTCTTACACTAAGTGTGATCAGTGTTTCTGTGATTGTACTCATG
ACAATAATCAAGGAATGAAAGTCAGCTCTCTCTTGTCTTCTCTGAAATCT
GATTTATATAGTTGAAAACTGGTGATAGGAATAGAAAGTTTAGTCGGTAA
AACGTTCTGTTTGTTCATCAAGTGTGCTGGTTTTTCTGATTTTTACTTTT
ACAATAGTCAAGGAATGAAATTCAGTCCTCACTTCTCTGTTTCTTGTCTG
AAATCTGATTGTGTTTTTGTTGAGAGGATCAAATTTAGAATTGAAGACGA
AAGTGGTCTCATTTATGATCTTCTCATTGACTTTTTATAAAGGAAAACAG
GTGATAAGAATGGAAAGTTTGGTGATACATTGCAGAATATATCAGGATAC
ATGTACTTATTTTTAGTGTACGACTTGTTTCAAATACAGGATGTAACATT
TGAGCTAATCGGTCCTATTTATCAAGCCCACTGTCGCCATTACAAACAAA
AACTGCTCACTCACAAGTATTGTATTGTCGTGCAAGGTGTGGATTTTCAG
GGATCGTAGTGGGATTGTCTAAGGTAGATTAATTCTTACATATTTTTGAA
TGCTAAATGTATTGAAACTCTTTCCTTCTTGAACCCAGGACTGTCTCCAG
GACCCGTCCCTCTGTCCTGGGACAGAAATTTGCTTGTTGGGATGGAAAAA
AAATTAATCTTGTCTATCTAAAAAATCTGATATTGCTGGTAAAAATGTAT
TTTTCACAGCAATGACAGATCTAACCATATTTAAAGCTGGAGACAGCCCT
GTTTTAACCTGATCTCATTGTTTGTAGACAATCATGAACAGTTTAAAGAT
CAGAACAGTTTAAAGATCAGTCATCATATTGTGTAATGTAATGAAGTGAT
GACGATGTGAATGTCATGATCACTTGTTTGTACAATATTTGTAGATGCCA
GCTTTACAGACCAAAAACATCGAAGAGTGACGACCAGAGGAGAAACCTTC
AAACCTCTATCAAAGAAACGCACAATTGTTGTCAGTCAGGGTCGGTCAAC
ATTGTACATATTTGTCTGTTTTTGATGGAGCAGATTTTTAAAAAGACTTA
CAAACTTGGACAAATCAAACTGATAATCAGAAACCTAAGATTCCAGTCCA
AGTTGTAAGGTAAATGTGTTGTGTAAGTATTGAAAGAATATGTATAATTA
TGATTATTTGGTTGACAGTTAACTTGTTTTCTCTATACATATTTCATGTG
TAACAGTTGAAAAGAAATATCTGTCATGAAATTCAGTGGGTGAGGGCCAT
ACATCAAAATACCTTGTGTTTGATCAATTGAGCATGAAGCACTTTTAGTG
TGAGTTTTACAGTTTTACAACTTGAACATTAATGTAAGTCTGTAGGATAT
TTGACTGTATTTGCCAACAGTACAAAATATTGCAAAGCCAACTAATTGAA
CAACTTCTCTAGACACAAGTGTACTTGAACCAAAAGCAATGGTCAACAAT
ACTGTAGTTCAGTTCTACCTCAGAGCTCGTACAAATACAACAAGTAGTCA
ACAGTTATAAGGAACGCAAACAAGTTCAATGTATATATATATTTATATAT
ATATGCTAGCAACTGGAATGTTGTATTTATACTTTGTAATTTTGTGGGGA
ACATTGATGGCAATACTGTTAGATAAAGACGCAAAGCTGTTGAACAAAAC
TTAAGTCATAACAGAACATTTTAACTTAACTCTTCTTGATCAAAGCACTA
CTTTCATCAGAACTCCAACCATGCATGTGTTTGTGTCACTGTTTTTTCAC
CGCATATTGAATTAACATTGTTTTAAGGATACAGTGAATTATGTACTGAT
AATTGGTTGAGGAATACTAGTGTTAATGTGTTGGTTAGTATTTCAATGTT
ATGAAAGTGCTCTCAAATTATGCGGAAGTCATTGGTAGAAGTTATAATGA
AGACTGAATCATTTTTAATGAGGAATGGAATGTTAGCCTGCTTCCAACCC
TATTATAGCTTCTGACTTTCTTTCATCCTCGCAAAGCGAAGACAAAAGAG
ACTCGGCATCTATAATAGGTTTGGATACCAGGGTATGAAGTGTAATTTTC
ACTCTTGTAAATGTTGTGTCACAAAAATGACCTGGTAAAAGACTTGCAAG
GCCTTTGAATAGTTCCTCCGAATGGCTGAATTTTATAACAGATGATCAGG
AATGACATGGTCGAAGAAGAGTTGATGTTCTCCAAACAATGGAGACTTGT
AACTATGTGGCAAAAAATAAAGTTTCCCACCAATGACTTGTTTGTTTTTT
GTGTGTGTTATATTGAGTGG Coding sequence (CDS) from alignment at Sc0000231:24354..28173- >BlTCONS00113898 ID=BlTCONS00113898|Name=BlTCONS00113898|organism=Branchiostoma lanceolatum|type=CDS|length=363bp|location=Sequence derived from alignment at Sc0000231:24354..28173- (Branchiostoma lanceolatum)
GAACGACAGCGACAGATCACGCTACTAACGCTAGAGGGAAGAGAGGATGG
AAGCAGCACCAGTACTGATGGAGCGGGCAGGAAGAGGAAACGACCAATCC
ACCCAGAGGGCGAAGACGAGATCGTGAAAGTTGTAGTCACCACGGCGTTA
TGCCAGCTTTACAGACCAAAAACATCGAAGAGTGACGACCAGAGGAGAAA
CCTTCAAACCTCTATCAAAGAAACGCACAATTGTTGTCAGTCAGGGTCGG
TCAACATTGTACATATTTGTCTGTTTTTGATGGAGCAGATTTTTAAAAAG
ACTTACAAACTTGGACAAATCAAACTGATAATCAGAAACCTAAGATTCCA
GTCCAAGTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113898-exon-Sc0000231-1564993656:28140..28173 | BlTCONS00113898-exon-Sc0000231-1564993656:28140..28173 | Branchiostoma lanceolatum | exon |
| BlTCONS00113898-exon-Sc0000231-1564993656:27166..27280 | BlTCONS00113898-exon-Sc0000231-1564993656:27166..27280 | Branchiostoma lanceolatum | exon |
| BlTCONS00113898-exon-Sc0000231-1564993656:24354..25729 | BlTCONS00113898-exon-Sc0000231-1564993656:24354..25729 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000231 | genome | Sc0000231:24354..28173 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055833 |
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