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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000231:426166..434001+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113890 ID=BlTCONS00113890|Name=BlTCONS00113890|organism=Branchiostoma lanceolatum|type=mRNA|length=7836bp|location=Sequence derived from alignment at Sc0000231:426166..434001+ (Branchiostoma lanceolatum)
GAGATGATGGAGCAGGTGAAACAACAGGAGGAGGAAGATGAGTTCGAGCC
GCGATCTAAGAAGGCACCGCTCCATGTCAACAAGGACATGAACATGCCTA
ACCGTACAGGCTACCGCTTCGATGCCTCTTCTATCCTGAAAGGTAGGGAT
GTTTCACTATGAATAAGCAGTCATGTTAGTGTTTTTGGTTTCCATTTTTG
CTAAGCAATCTTATTCTTTGCATAAAGCTTAGTTCCCCGTATGGGGATCA
CTAGATATCCTCATTCAAGATAGATAGAGATAGAGAAGACAGTAAAAAGT
CAGAAAATCAGCACTTTTGTCATTTTGTATGTTATGACTGAAGATGTAGT
TACACATGTAATTTAAACTTCTACCTCACCTAAGAGTGAAATGAGAAACT
ACTGATGTTATCAGACGGAATACAGTGTATTTTTGTTTAAGATATACAAA
ATGTACATCAGTTTTTCTGAAATATGTCATTCTTTGTCTCCTCAGCAGGT
GCTACTGCCATTGCCATGAGTCGTAGAGACAAGTCACTCGGGGCCATGAG
CCAGAAGTTCATCATGCTCTTCCTGGCATCGAATGTAAGTCTTTTGATGA
AACTGGCTTACTAGTGGCTGTTATGTGTACACAACGATGTCCAAAATATT
GAACTGCCTTGGGTTTGGACGGGAAGTCTGTAGGCATTTTCCTAGGAACT
GATAGTTACTCTGCTTCTTATTTCAAAACCCTAAATGTCCTGTACAGAAT
TGAACCAAAACTTCCCATGTCAGTAGGCGTTGTGAGAACAAACCCTTGGC
CAACAAGGATGTCCATAAGATCCAACTGAAATCGGTTAACATTGTACTCA
GCTAAACTTACAGCAAGCATAATTCTTTCCGCACCAAATCTCTAATTTCA
AATGTTCTGATGTTTTTCTTCATAAGGTTAAGGACATCTCCCTGGAGACT
GCTGCTAAGGTGCTGATTGGAGAGGGAGGACCCTGTGCCGACGAGAACTC
CAAGTTTAAAAGTAAGTTAATACATGTAGATCAAGGAAATCATCCCTTTG
AACCTGCGAACAATCGGCCGAAAAAAATTGTGATGATTTTTCTGCTGTGT
GACGGGTATAGTACTAGTAGATTGTCACTAAGATACTGACTTGATAAATC
ATTTCTTTCTGAAATTTTTACTTAAGTAATGTGTGTGTTGTTCTCCGCAG
CTAAGATCCGTCGGCTGTACGACATCGCTAACGTGCTGACCAGTCTGGAG
CTGATTAAGAAGGTTCTGGTTCAGGAGGACCGCGGGAAGAAGCCGGCCTT
CACTTGGATCGGGCCAGACCCTGACATTGAAACCTTCCGAAGTATGTTAT
CAAAACTTGTAGACTTTCTATGTACAGATTTAGTGAAAGGATAGAAATCT
TTTCTACACCTCACTGTCCTTTTAGTAGTTTTACATTATGATCTTGCTAT
GTATTCTTGATACACCAAGTTTCCTTACCACCAAACCTTGCTTTCTGCAC
TTGAATTTTCATAGTTCTATGCCTGACTCTTGTTTATACTTGACATGTCT
GAACAAGGAGACTCCATAAGATCTAGGTAGGAGAGGCATTCTTTGCTTCT
GTCTGTGTATGTATTTCAGTCCTTATAGTTGTAGTTTTGGTATTGCAATG
AAAAACTATCTAAGTCTACTGAATGACAGCGAATACTGAAAGGATATCAA
GATGAAATGCAATGTTGTATTTATTGCTAATTTCGCAGTTTTCGTTCTGA
AGCTTAAAGTCTCTTGAAATGAATGATCAATTAATGAATATGTTCTATAT
GTCGTTTACAGTGGAAGAGAATGCCAAATCCGCTCAGCCAGCTGTCATGA
GCCAAAGAACCATGTTCGGAACAACTGCAGTACACAACACACAAGGTAGA
TGGTGAACCTGTTAATCAACTTAGACTACATGTATAGCTATACAGTCTGT
ACATGTGCTTGTAAAGAGGTTCTTGTCATGTGAACCTGTCAGACAAATGA
AACCTCCATAGAGCTATGGAGGTTTTTGTCAAGAGTTTACAAGAGCATGC
TATTATAGACAGGTCCAGAATACAGTCAAGCGTGTGTCTAACAACCACTC
AAGGGACATAGGAAAAGTGGTTACTGTAGATAGGTGGACACTACAGAAAG
AAAGCTGGTCATACCACAGTCAGTAGAAAGGAACTCCCCAAAAGTGGCCA
CGATGGTCAGGTGGTCCGTATTCAAAGGTGGTCACTGCAACCGGCTTGAC
AGTACCTGCCATTAGATTCTTCATATTGTTACACATTGAATATCGTGTTG
TTACACATTGATACAAATATTCATTTCTCAGGTACATGAAGTATGACAAC
GTATTTGTCTATTTTTCCAGATCTCAGCGTGCGTGTGCTTGCTCCTTCGG
GTACAGACAACCCCAGAGGTCTGACTCGCCACGCCTCCTTCCAGGTCTCA
GCTGGAACTGCAGCCAACACGGAACAGAAACCCTTCTCTTCTGCACCCAG
CAGTCCTGTTAAAGGTTGGTTTGCATAGAAGTGTTTTCATGTTAGGAACC
TAAATATTTCCTTGTCATAGTAACGTTACTTCTAATTTAACCCCACCCGA
TGTATTTTTTCAATTTACGGCATATGTTTTCTAATTTTGCAACCTCTTTT
GTACGATGTACAGTATGGTTGCAAAAATGTTTTTGGAAACGGGACAAAAT
TAATAGGTGTGCGGATGTCATACACATAGCCAAGTCAGCGTTGTCTTACC
TGACCAACCCTAGCAAAAAACGGTGAAGATGACTGATTCATTCATTGACT
TCAGGTACATAATCTAAAGCACAACATTGCTTTTCCAAGGCCTTATCTAC
GTTTCTTGCAAATCAAAGCTAATGAAAAAAAAAACATTTGTCTGTCCCGT
TCAGAACCTCCTCAGCAGTTCCGCATGACGGAGCGGATGCAGCAGCTGAT
GGCGATCTGTCGTCTGGAGCAGGAGGTGAACCAGCGCGAGGAGGACCGAC
AACGCTCGCTGAAACGACAGCTGCTCGAGTGCCAACAGAAGGCAGAGCCG
CTTGCTAAAGTACCGTGGGGGGATGGAGAACAGCCAGCCGAAATCACGGT
TATCAAGAAGGTGCTTATAGTTTCTGTATGTTTAGATTTGTTCAAAATGA
TTGTGAACAACTGAAGGCCAATCAGCTAGTGTGCTAAAGGTTAAGTGTGA
ACTGATAATAACATACAGTACTTCCTTATTGTTGGAAAGGATTTTGGTGC
AACTGCTGTGAAGCATTTGGGGTTGTTTTTAAATTTACACTTCCCGGTAG
TTATTTTTAAATACTGAAGAGTCTATAAGAAGTTCTTACTGGGATAGGAG
CATTGTTGCATATCATTTCCCTCCTGCATAACGAAATAACCTTTACATTG
TGTCAGGATAGCTGGATGTTTTAAGAATTTCCCAACACGTTGTTGAATTC
TCTGCTTGTTGTTCCTTATTTCTAAGTTTCCCTTCTTAAATCCACAGGAA
GTCCCAAGGCTGATACCGATGTCATCACTACACCCCATCCCGCAGTCTGC
ACAGGCTGCCATGGTAACTCAGTGTACCAAGGTGTACAGACCCATTCTGC
CAGCCAACAAGCTCCGCCTTGCAGCAGCACCCAGCACTGCAGCTCAGACT
GGCAACACTGTCACATCAGCAGCAGGTAGGAGCTGAACAGACTTAACCTA
CTATTTCTCTTTCATTCTAGCTGCTCTGTTCAAAAATGAATGCAGTAATC
AGTGTAAAAAACATTGTAAGTTAAAAGGAACTTTCTTTTGCAGCTCGGGA
TAAAATAAGACATTCACATTTTAATATTCACAGTAGATAAGCATTATTGA
ACATAATCTCCGTTGCAAAGGTATTGAAGTAGGAGGAGAAGAATCCTGAT
TACAACTTTCTTGGTCAGTCAGTTTTGCAGTGGCAACCTTTATGAAACCA
AATAGCAGTTGTCTAAGTATGACCTATGTGTTATCTTAACAAAGAAGGCT
ATTCTAACATATTCCGATCAGTTATGCAAATTAGGCCCTCATTTGCATAA
TTTGCATTGAAAGTGTGTCAACATCTGGACAAGTACCTTACCTCCTTCCA
ATTTTCTTCCCTCCAGATGCAGGCCACACCCTCATCCTCCAGCCCGTGCA
GAACTGCCCTCGGGGGACTGCTGCCAGGATTGTCCTCTCGCCCAGCAAGT
CTGCCAATCAAACGGTCACCATGGCAACAGCAGGACAGCCTCTCACCACG
TCCATGTCTCTGTCCAACCTCCTCAGCACCATGGCTCAGAGCAATGCTGC
CAAGGTGTCCGTACAGCTGAAACCGAACTGCATACCACAGAACGGCGCCG
CAACAGCGTTTAACGGACAAGTCAGCAGGACACCACACCTTCAGGAAAGT
AAGGAGGGCATGCCAAAGCANAAGTAAAGAGGGCATGCCAAAGCAGGAGA
CCATGGCCAACAATACCTTCACTCTACTGCAAAGTGCCAACAGCGCGTTC
ACCGCGACCGCGCGGTATCTTAATGTCGGATCGCAGGGTCTGGGTGGGTC
AGCCGTACCATCAAGCATTGTGGTAACCCTTCCAGATGGAGTGGTGAATA
ATCAGCTGGTTACGTCGACCGCTGCGCCAGTGCCGGCAAGAAGAAGTGGG
CGGCCAGTCCAGCCGAAGCGTCTCGGAGACGAATTCGAGTACATTCCTGT
CGTGAAACGTCGGAAGGTGGAGGAAAGCAACGGAAGCAGCCAACAGGATG
GCAAAGAAGGAACAGCTGAAGAGGCAGTTATATGTCAAAGTGAGAACAGC
AGCCAGGGAGCAAGCCCGAGTTGTTCCGATTCTGACAAGGAAAACGCCTC
TCCAAGTGAACGCCTAAATAAAGAGGTGGAGAAAGCGCATGGCCAGAAGC
AGCAGGGGCTGTTGACCAATCACAAGCCTTCTCCGCACCGAGCCCTCCAT
CTTTCTCCCGAGTTCCAAAACTCTTCGCCGCCCGCCAAAAGCACGACCTC
ACCTGCCAATATCGCATCTGACATGGACTTGGCTGTCCCCATTGAAGCCG
AGGAAGAACAACAACGTACCAATCAAGATGGCGAAGCAAACTCTCAGCAT
CCAAGCAGGGTGGACCAGAGAGAAAGTCAAACCTCTGCCCTCCCCCAACC
CTTTACTCAAAGCTGGCCAGCCGACCAGCAGGTGCTTGACAAGAAGGATG
TCACCACATCGGACCTTCCACAAGCTGCCATGTTTCCACCTGATCTACTC
ACCACCAAGGTGATCCCAGTCATCGCATCTCCCTACCAGCAAGTCTTCCT
GAACCGCAGCGCCAGCAGCTCTCCTGTGGGCTTCTTCAGCCGTCCCGTGT
CGTTCTCGGACCTTGAGCACGTGTATTCCCCGACAGGACAGGTCCTCCCC
ATCCCCACATCTTTCCCCTCGTCCCCCTCCCTTTTACACACCAGTGGAGG
CTCTCCTCCCCAGCTGGCCATGTTTGCTCCAACTCTACAGCAGGCTGCCT
CCCTAGTCACCCCCCAGACCAGCCCTCTACACCACACCAGTCCGCCTCAC
ACCAGCCCAAACCAGTCGCCGCTGGTTTTCCCATCTGCCATTGTGCCAAG
CATAGCACCGGGAGGAAGCCCGAACGCCCTCCCCGTTGCCATAACAACGG
TGCCGTCGACCTTCAGCTTCACTTTCCAACAGCTGAGAGGAATGGGGATC
ACCACCCAGCCGTTACACATCGCTCTCAACCCGCCCTCCAACCTGCCAAT
CAACCAGGTTGTCGGCGGCAACACCACCACCTGCACCTCCAGCCAATCAG
AGAGCAGCACCATACCTCTGGTGTCAGTCAGCCAGGTTGCTAGCGGCAAC
ACGTCGCCTGGAAACAGCCATGTGACGTCATCAGTATTGCCGGCGCCGCT
TGTGCTGGGTCAAGGGTCATCCTTACGACCTGAGTTTGACCCCCTGATCA
AGACCCCAACTGCCAACACCATGAACAACAAGGACAGTACTTTCTTTCAC
AACACGCCATTGGTTGTCCCAACTCAGACAGGTGTGTTTTCTTCACCAAC
AGCCAATCAGAGCACAGGACACTTTGGAACGGCTCAGAGAAAGCTGTCCC
TCCCACATGAGCCTTATGCTGAGAGCTCATAATACCAGAGCTGTATAGCT
GCTTTTAATTTCTTAACTTTTCAGCTGTTAATACTTTATTTAATTTTTAG
ATACTGCACATTATCATTATACAAAAATGTACAAGGCATCTCTACAGCAT
TAGAATTTAGAAACAATATTCATTTGGTTTTCCTCACATAAAAAATCACT
CCTTCAGCAAAGCATAGGCTAGCATGATCTTGAATAGCTACAAACTTGTG
CACATTCCATTTGATGAACACGCATATCAATATCTGAATGTAAATGTATT
GAGAATTGATCGGCTCCAAAAGGAGATTGTTTCGATGTTGACCAAACAAT
GAAACTTGGTGCTGTGTAGACCATAGTGTTTATAGGAAAATGCAGGCTTT
GAATTGTCAGATAGTGTTGATTTTCCTTGGAAAACTCTTGAAAGTATGAC
CAACTAAGTTACTTTGATGAATTTTGTACGTTTTCTGGTCATGTGGGCAT
TACTATGTAAAATTTGGCTGTTTTTACGTTTTTTCCACTATTGTTATTTT
CTAGATAGAATTATAGCTTTATGTAGTCTGTAGCTCTAAGCAAATGTAGA
CTGCACTTCTTTGATTCAGATATACATAATTGTACCTAATTTGATATTTA
TTGCTTATTTGTAAGCTTCTGTTATCACCTTATTGTAGAGTGATCTAGAG
ACACGCTTTGCTTAAAGTTCTGATTTTCTTTAACACACAATGAAGTAAAC
TGACATTGTGCTGCTATAAATGCTATTCATTTTCTACCCAGTGGTAATCA
AAGTTGTTTAATTAAAAAGACTTGAATTTTATTACTTGATTGACCCAAAA
CTGCCAGCCTACTGGAAAATATTTCTGTGATTTAGTGTGTTTTATATATT
ATATGTATATTGTTGCCTTTCAATTGGCTGCAAAATAATTGTCAATACAG
GAAAAGTGACATTGCAGTACTTTGTGTTTGTCTTCTTTGCGTATACATTT
TTTATAAACAGACGTGGTATTAATCTCAAAGCAGCTTTTGGGGTGAATAA
TCAACTTTTTTTACCGGCCGGTTTTTCAGATCGTCGCTTACATTTAGGGT
GACGACATTATGCTATATAGTGTCCTTTGTTAGACTTAGAGTGAAAATAA
AATGATTTTCCACCCCAACATCTGCTTGGAGATGAGAGTGAATAGGAAAT
ATAGAATTTGCACTTGAAAGATTTACCACCCCGAAATGAAATTAAGAAAT
AGAATTACACGCAATAGCAACCGATGGATTGTCAAAAATTAATCAGCACG
TCCACGGAGTAATGGTACCGTGTCAACATCGTTATGTGATGTAATCTCCA
AGCATATCTAACGGTGGCAAAGACCGTATGCAACTGGCAAAAGAGTTGTT
ACAGCCACTCATACGGTCTATGCCGCCGTTATATCTTCTTGCAGATTAAT
GTGACGGCTTTTCCGAACATCCAGTGATTTATTTTATTCGCATATGTTTT
CAGAGTATTAGGCAGGAAGCGATTGCTTATTTGAAGCCTTCTACTCAAAA
CATACAAAAAAGAGACATAATAACATACATAAATACAGAATGGATAAAAG
GAAAATGACAATAGACAATACAAGTTGGTATCTATCAATAAATGAATCTG
CCTGTACAATGTATGTAAGTATGAACTATATCGAATATTTTACAGTTTTG
TAAGTATGAGAGTGACGTAGAACCGCGTAACAGGAG Coding sequence (CDS) from alignment at Sc0000231:426166..434001+ >BlTCONS00113890 ID=BlTCONS00113890|Name=BlTCONS00113890|organism=Branchiostoma lanceolatum|type=CDS|length=1698bp|location=Sequence derived from alignment at Sc0000231:426166..434001+ (Branchiostoma lanceolatum)
ATGCCAAAGCAGGAGACCATGGCCAACAATACCTTCACTCTACTGCAAAG
TGCCAACAGCGCGTTCACCGCGACCGCGCGGTATCTTAATGTCGGATCGC
AGGGTCTGGGTGGGTCAGCCGTACCATCAAGCATTGTGGTAACCCTTCCA
GATGGAGTGGTGAATAATCAGCTGGTTACGTCGACCGCTGCGCCAGTGCC
GGCAAGAAGAAGTGGGCGGCCAGTCCAGCCGAAGCGTCTCGGAGACGAAT
TCGAGTACATTCCTGTCGTGAAACGTCGGAAGGTGGAGGAAAGCAACGGA
AGCAGCCAACAGGATGGCAAAGAAGGAACAGCTGAAGAGGCAGTTATATG
TCAAAGTGAGAACAGCAGCCAGGGAGCAAGCCCGAGTTGTTCCGATTCTG
ACAAGGAAAACGCCTCTCCAAGTGAACGCCTAAATAAAGAGGTGGAGAAA
GCGCATGGCCAGAAGCAGCAGGGGCTGTTGACCAATCACAAGCCTTCTCC
GCACCGAGCCCTCCATCTTTCTCCCGAGTTCCAAAACTCTTCGCCGCCCG
CCAAAAGCACGACCTCACCTGCCAATATCGCATCTGACATGGACTTGGCT
GTCCCCATTGAAGCCGAGGAAGAACAACAACGTACCAATCAAGATGGCGA
AGCAAACTCTCAGCATCCAAGCAGGGTGGACCAGAGAGAAAGTCAAACCT
CTGCCCTCCCCCAACCCTTTACTCAAAGCTGGCCAGCCGACCAGCAGGTG
CTTGACAAGAAGGATGTCACCACATCGGACCTTCCACAAGCTGCCATGTT
TCCACCTGATCTACTCACCACCAAGGTGATCCCAGTCATCGCATCTCCCT
ACCAGCAAGTCTTCCTGAACCGCAGCGCCAGCAGCTCTCCTGTGGGCTTC
TTCAGCCGTCCCGTGTCGTTCTCGGACCTTGAGCACGTGTATTCCCCGAC
AGGACAGGTCCTCCCCATCCCCACATCTTTCCCCTCGTCCCCCTCCCTTT
TACACACCAGTGGAGGCTCTCCTCCCCAGCTGGCCATGTTTGCTCCAACT
CTACAGCAGGCTGCCTCCCTAGTCACCCCCCAGACCAGCCCTCTACACCA
CACCAGTCCGCCTCACACCAGCCCAAACCAGTCGCCGCTGGTTTTCCCAT
CTGCCATTGTGCCAAGCATAGCACCGGGAGGAAGCCCGAACGCCCTCCCC
GTTGCCATAACAACGGTGCCGTCGACCTTCAGCTTCACTTTCCAACAGCT
GAGAGGAATGGGGATCACCACCCAGCCGTTACACATCGCTCTCAACCCGC
CCTCCAACCTGCCAATCAACCAGGTTGTCGGCGGCAACACCACCACCTGC
ACCTCCAGCCAATCAGAGAGCAGCACCATACCTCTGGTGTCAGTCAGCCA
GGTTGCTAGCGGCAACACGTCGCCTGGAAACAGCCATGTGACGTCATCAG
TATTGCCGGCGCCGCTTGTGCTGGGTCAAGGGTCATCCTTACGACCTGAG
TTTGACCCCCTGATCAAGACCCCAACTGCCAACACCATGAACAACAAGGA
CAGTACTTTCTTTCACAACACGCCATTGGTTGTCCCAACTCAGACAGGTG
TGTTTTCTTCACCAACAGCCAATCAGAGCACAGGACACTTTGGAACGGCT
CAGAGAAAGCTGTCCCTCCCACATGAGCCTTATGCTGAGAGCTCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113890-exon-Sc0000231-1564993656:426166..426307 | BlTCONS00113890-exon-Sc0000231-1564993656:426166..426307 | Branchiostoma lanceolatum | exon |
| BlTCONS00113890-exon-Sc0000231-1564993656:426664..426749 | BlTCONS00113890-exon-Sc0000231-1564993656:426664..426749 | Branchiostoma lanceolatum | exon |
| BlTCONS00113890-exon-Sc0000231-1564993656:427092..427176 | BlTCONS00113890-exon-Sc0000231-1564993656:427092..427176 | Branchiostoma lanceolatum | exon |
| BlTCONS00113890-exon-Sc0000231-1564993656:427366..427741 | BlTCONS00113890-exon-Sc0000231-1564993656:427366..427741 | Branchiostoma lanceolatum | exon |
| BlTCONS00113890-exon-Sc0000231-1564993656:427977..428060 | BlTCONS00113890-exon-Sc0000231-1564993656:427977..428060 | Branchiostoma lanceolatum | exon |
| BlTCONS00113890-exon-Sc0000231-1564993656:428536..428679 | BlTCONS00113890-exon-Sc0000231-1564993656:428536..428679 | Branchiostoma lanceolatum | exon |
| BlTCONS00113890-exon-Sc0000231-1564993656:429070..429275 | BlTCONS00113890-exon-Sc0000231-1564993656:429070..429275 | Branchiostoma lanceolatum | exon |
| BlTCONS00113890-exon-Sc0000231-1564993656:429663..429840 | BlTCONS00113890-exon-Sc0000231-1564993656:429663..429840 | Branchiostoma lanceolatum | exon |
| BlTCONS00113890-exon-Sc0000231-1564993656:430282..434001 | BlTCONS00113890-exon-Sc0000231-1564993656:430282..434001 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000231 | genome | Sc0000231:426166..434001 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055826 |
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