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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000231:126315..133302+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113833 ID=BlTCONS00113833|Name=BlTCONS00113833|organism=Branchiostoma lanceolatum|type=mRNA|length=6988bp|location=Sequence derived from alignment at Sc0000231:126315..133302+ (Branchiostoma lanceolatum)
CTACCAAAAGTACAAAAAGTTGCCATCATCATCAATGTTATCTATGATAG
GATAAAAACATTGAGCACGTGGTGGGTGCAATATAACACCAAATCTGAAT
GGGTTTCCTTTGAAGATGGAGTGATAGAAATTGAACAACATACCATTGTC
AGCATGCTCACCTTTTTAACATGACATATTTTGTACAAATCTTGCTGTTT
AGGGGGAAAATCTGCAAAACAGCAGTCATCTGATGAATGCATCAACAAGA
GTGAAACAGAAAGCAACCTGGTCCTCTTGAATGATGCCCTATCTGATCTC
TTCTCGACACGAGCCAACAAATGTTTCAAATCTATGATACTGCCATGGAT
GGATGACAGTCCACTTTGTAGACTTGAAAATCTGTTCACACAGCTAGACT
TAGAGATGGTACGAATTCCAAGTATAGGGCCCTGCAAAGCAAAGGAACTT
AGTCTGCCTGGCATTGGAAAAGAGGAATGTTGGCAGACTCTAACTTGTTT
GGATGATTTGTTCAGTGAAGCTACCAGAGTACACTTAGGAGCACCACGGC
GCATTCTGATCGAGGGGGAGGCTGGTGTTGGCAAAACAACGTTTCTAACA
AAGGAAGCCTTAAATGCTATCTCAGGGGTTACAGAAGTTGGCAGACAACA
TGACATTGTCATACCCATCCAACTTCACATGGTGAGAGAGAGGAAAAGCT
TAGTGGAGATTGTACTGGACCAATGTGCATCAGAAACAACCAGAAGTTAC
ATTGATGTAAATTCTCTCAAAGCTGTCTTGAATGCATCTCGCGTGCTCTT
CCTCCTTGATGGGTATGATGAGTTGCCACAAAATGCCAGAAGGGTTGGGG
AGACCATTCCCAATTTGCTGTCTGGCAAACTGCATCCAAACAGCACCATC
GTGGTCACAACACGTCCATCAGTGGGCGTGCAACAACATGTCCAGCCAGA
CTGTCATTTAAAGCTCATGGGATTTTCCCAAAATAGTGTGAGGGAATTCA
TAACGAAGTATTTCAGCATTGCAGGAAACAATAAGGATGCAGGGACCCTA
ATCACAGAGCTGAAAGAAAATCCTTGCGTGGCTATTATGATCAAGAACCC
ACTTTTCCTGGCATTAAGCTGTCTGATATGGAAGGAAGATGGGAAGGTTA
TTCCTCAAACAAAGACAGAACTGTATGATAACTTGCTGATGTGTATCTGT
ATGAAGAAAGGAATAGATATGCCACAACAAAAGGTTCCACCAGGCTTGGC
AGACACACTGCTTAAGCTGGGCAGATTCGCCTTAGATGCACGGTTGAAGA
ATAGTGCTTTGCTTGACATGTCACCTAGTCTCCAACACAACATGCTGGAA
TGGGAGATGTTGCTAAAGCTTGGATTGGTCTCTCTTGTTCCTGAGCCTTC
CCCTTCCCAAGTTAATGGTAGTAAACAGTTGGCCTTTTCCCACAAAACCA
TGCAAGAGTTCTTGGCAGGGAGGTATTTAGCTCATGCCATAATGAATGTT
GATGTAGGTGAGATGACCAAAAGAATCACCTCCATGGCCAAAGTGTTGGA
TTTTGGTAACTTGCTTCAACTCACATGTTCCTGTGACTCGCAGGCAGCAC
AAACAGTAATGCAGGAACTTGGCAAGCTAAGTAAGATGGAATTCTCAAAC
TGTCCCTTTGGTGATTTGGAAGAGGCATATGCCCCAGTAGGATGGGTCAG
GACATCAGCACAGATGTACCGAAAATTTGTACATCTCTCTCTGAACATCC
TCCATGACAGAATGGAGCCAACTCTTGTCCAGCTGATTAGCAAAGCCCTG
CCTCATGCCATCTTCCACTTCAAGGTCCCAAGTAGAGAGGGGGATGCTTT
CAAGTATTACTTGAAAAATCTTCATCCATCATCCTTCCCTGAAAGGCTGA
CGCTTCAACTTCATAGATTCACGAGGAGCGGAGATGCAGTTGACTACCTT
GAGAAATGCCTTTCTCGCCCAATATCTGGTCTGAACTTACATCTTCATGT
ACCAGGGAGCCCTTCTAGATGCAATGATGAGCTGGAAACTACCAAGCTAG
TTTCACTTCTAAGGTATCCACATATTAGGGCATTGCATCTATCATGTAGA
GCACTTACCCCTTCCACCCTGCAGCCAATTGTGTCTCGTGGCTTGAAACA
GAAATTGCCTTTGTTGGAGGTACTTGATCTTTCTTGGAACAGTGAACTTG
GGGATGAGGGGATAAAAGTCCTGATGTTTGTAATACGCCATCTTCCAGCG
CTGGCTGTCCTGCGTCTTGCGTTGGTCGGTATGACAACTGCTGGCACACC
ATTCCTTGCTGCTGGTATGCGCCAATTGAAAAAACTGAGAGAACTGGACA
TCAGTCACAATGAGATCGGAGACACCGGGATCAAATCCCTGACCAATACA
TTACACTATCTCAGCACCATAGAGGTGTTGATTATGGAACAGATTGGACT
CAGTGATACAGGAATAGTGCTTCACTGCCTGGCTAACCTAAAGAGACTGG
AGCACCTAAATTTGAGGTCGAACAAGATAGGAAACTCAGGAATTGTCTCT
GTTGTCAAGACACTGCATGAACCCAGCAAGGTAAATATTGGCGAAACTGC
AAATGTGGTTAAGAGTCTGACCACAATCCCTAACTACAACAACACACTAC
TGGAGCTGTACATTGGGGGAAATAAAGCAAAAGCACATGCACTGATAACA
GTCTTGCAAGAAAGCATCTATTTGCCTAACTTGACCAGACTCGACATATC
AGGAGACTGGTTCTCGCATACAAATTTGGACGACACTGCTGCAAGGAATG
TGGCAGAAGCCCTATCAAAGCTCCCTGCCTTACAAATGTTGAACATGAAC
AACATTTCCATGACTGCTGAAGGCTTCAAAACTATACTAAAGGCTGCTGA
GGATCATCCTACATTGCAGCAGTTGCAGTAAGTTCCAAACACTGTTGTCC
AAAGGAATAGTAGTTTTGACACATTCCATATGGAAACTCAATATGATATT
CTACTTTTTTCATGTAAGTATGTAGAAATATGTATAAGATATCTTAACTG
TCAATAATGCAGATATTCAGACACACATACACACACACACACACACACAC
ACACACACACACACACACACACACACACACACNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACACACACACACAC
ACACACACACACACACACGCACACGAGTAGAGGCCTAAAAATGGCTGCTG
TTCAAACCAGTACAGAAACCTGGTACAGCCTAAAACATTGGAGTAGACAG
TGCTTGACACCATGTAGATTCCTTAAGTATAATGCCCCAAAAGTGAAAAA
TTAGAACGTGTTTTCAAAAGCATATGGACCAATGAACATGGTTTCCACAA
TGTGGAGGTAACAGGCTTGCGGAAAATTATATATCAGTATCTGATCAGTT
GTAACGTCCCAAATCCCAAGTCAATACGGTACAAGGTTTGCACAATGTTG
CTTACCAGTGATGTCAAACTATATATGCTTCATTTGTTCCTTGTACAGCT
ACACCCGTTCAGAAGTTCCTGATGGAGTGGACACTGGTGCCAGCTGCTTG
CATTTGGGGAACCCGTAGTCGCCATCAGGCATGATCTACCCCAGCTGCTT
TGAACCAGTATTTTGAACATTTTGTAATATTTTGAACATTTGATGTAGGG
GTCTTTACGATGGTTAAAGTATGTCCTGGGCACACAGAGTGCATGACTGA
CAGCAAATCTATCTTGTTCCTGACATGTCACGACTCCACAGTTGAGAGGT
CCCTGCAAAAAATGTAAACATAGAACCACCATGAAAGATTTGCAGTGTTG
TGTAACAAGTTGAAAGGAACTGCACTGTAGATTATAATGGTGCAAGGAGA
GGACTATAACAGTTACTACAATCTATCTGTTCTTTAAATTACCAGGTGAA
ACTTTAGTGCATGGCAGTTGTAACTGGTACATTGTATGACAACATACATT
GTAATTGAATTCATGCTTATATCTAACAATTCTAAAGAACTAGTATAAAT
AATTATCTAATTCATGAATAACAGTAGAGACAATCTACTACAATCATGAT
ATGCATGCTAATGCTCGTGAACAGTATGTTGATAACAGTATGCTGCATCA
GGAATGTATAATTAATATTGTCTCGTTTTTACATAGAGTGGAATATAAAT
TGGCCTATATTATATAGGTATGCTATATATTTATATATGATGCTGCAATG
ACTATTGTACTGTGAATTTCCAGGTGAGATACGATGCTGCAAAGAGAGCA
CTATTGTACTGTAAGTTATCAGATGAGATATGATACTGTGAGGACTTTGA
TGCTGCAAAGAGGACTACTGTGTATTTGCACAGTTGCCAATACCTCAGCA
CGAAATTGGTACTTTTTAGAATTGTGTAAGATCATACAGACTTCAAGTTG
ATTTTACATATGACATCCATGTCACATCTTCACTTGAAAGTTCATCTGTG
TTGGTAGAAGTCATTCTGAATGGAGTTTAAACTGTAAACGCCAACACAAA
AATTGGACTTACCCAAATTTTCGACGGATCAACTCCAGTCTTTGTCAAGG
AGTGAGCAATCCACTGCTTCTGTGACGTCACGTTATGCAGATGAGACACG
TGACTCGGAGAGCAGTGGATCATAGGTTGCAGAAAGTCTATTTTACCAAT
GGACAAGGGGCGGCTGACGGTTATTCTCAACAAGGAAGACTACAAACGAA
AGTGTTTGGACTTACTTGATGATAAGAACACGTACCGTAGACTTGGAAAA
AGGTACCTAACAACAAGATACTGTACTCCAGCGGTTTCAGACTGAAGGTG
GGTTAAACAATATTGCTTATAAACGGTTATACCCAACCACACAAGTGCCT
CCGAAGTTTTATGGTCTCCCTAAAGTCCATAAAACTGGCATTCCACTGAG
ACCCATTGTTAGTAGTATAGACTCCATTTCTTTGTGCTGACTATCTGGCA
GATACTCTTGCCCCATTAGTGGGTAATACTCGACATCACATTAAGAACTC
ACAGCAGTTTGTAGAACTGATTAAACATGAACATGTAGAAGAAGATGAGG
TACTCCGTTCTTATGATGTGACAGCACTTTTCACTTCAGTTCCAGTTGAT
AAGGCAGCAGATGTAATTCTACAGATATTGAAGGAAGATAAGTCTTTACC
CCAACGCTCTACTTTGAGCCCAGAACAGTTGGTTGACTTACTCAAAATCT
GCCTGAACTGTACTTACTTTGTGTTTGATGGTATATTCTTTCAGCAGATC
CATGGGGCCGCAATGGGGTCACCAGTTTCCCCCATTGTGTAAATCTGTAC
TTAGAACAACTTGCCATCAAATCTGCCCCCCACCCCCCTGTGTGGTGGTT
CAGATATGTCGATGATACCTTTACCAAACTGAAGAAGGCGTACGCCAATG
ATTTCACAGAACACCTCAACAACTAAGATCCTGACATCAAATTTACGTTT
GAGAAGGAAGAGAATAGATCTTTAGCTTTCCTAGACACTTTAACAACAAT
ACAAGAAGACGGGTCACTACGAGTCAAGATTTACCGCAAACCCACGCACA
TGGACCAGTACTTGAACTTCCATTCAAACCACCCCTTGGATCATAAACTC
GGGGTTGTCCGTACCCTTTTTCATAGGGCGGAAACCCTTATCACAGATCC
ACAGGACAAAGAAGACGAGAAACTTCACATTACAAGTGCCTTGAGAATGT
GTGGTTATCCCACATGGGCGTTGAGAAAGCCACTGCGCTCAAACCCCAAC
GGCTCAGCAAAACTAACAAGACCTGGAACAACAAGGGAACCAACAGGGGT
TTCGTCACTTTGCCATACACGAAAGGGGTGTCTGAAGGACTTAGACGCAT
TTTCACATCACATGGGATAAAGACCTGTTTTAAGCCAACTAAAACACTTC
GAAATGCCCTAGTAGCGCCTAAGGATAAAACACCTAGGGAGGACAAGTGC
GGAGTTGTGTACTTCATTCCTTGTCAAGGTCAAAACATTAGAGATGTACA
TTGGAGAGACCGAACGCTCACTGAAAACCCGTTTCAACGAACACAAGCAT
CCGAGCATAACCTCTTCTGAAATTTCTAAACACATACACTTAGAGTCGCC
TGGACATTCGGTTTCATTGGACAAGGTTAAGATCCTGG Coding sequence (CDS) from alignment at Sc0000231:126315..133302+ >BlTCONS00113833 ID=BlTCONS00113833|Name=BlTCONS00113833|organism=Branchiostoma lanceolatum|type=CDS|length=2664bp|location=Sequence derived from alignment at Sc0000231:126315..133302+ (Branchiostoma lanceolatum)
ATGATACTGCCATGGATGGATGACAGTCCACTTTGTAGACTTGAAAATCT
GTTCACACAGCTAGACTTAGAGATGGTACGAATTCCAAGTATAGGGCCCT
GCAAAGCAAAGGAACTTAGTCTGCCTGGCATTGGAAAAGAGGAATGTTGG
CAGACTCTAACTTGTTTGGATGATTTGTTCAGTGAAGCTACCAGAGTACA
CTTAGGAGCACCACGGCGCATTCTGATCGAGGGGGAGGCTGGTGTTGGCA
AAACAACGTTTCTAACAAAGGAAGCCTTAAATGCTATCTCAGGGGTTACA
GAAGTTGGCAGACAACATGACATTGTCATACCCATCCAACTTCACATGGT
GAGAGAGAGGAAAAGCTTAGTGGAGATTGTACTGGACCAATGTGCATCAG
AAACAACCAGAAGTTACATTGATGTAAATTCTCTCAAAGCTGTCTTGAAT
GCATCTCGCGTGCTCTTCCTCCTTGATGGGTATGATGAGTTGCCACAAAA
TGCCAGAAGGGTTGGGGAGACCATTCCCAATTTGCTGTCTGGCAAACTGC
ATCCAAACAGCACCATCGTGGTCACAACACGTCCATCAGTGGGCGTGCAA
CAACATGTCCAGCCAGACTGTCATTTAAAGCTCATGGGATTTTCCCAAAA
TAGTGTGAGGGAATTCATAACGAAGTATTTCAGCATTGCAGGAAACAATA
AGGATGCAGGGACCCTAATCACAGAGCTGAAAGAAAATCCTTGCGTGGCT
ATTATGATCAAGAACCCACTTTTCCTGGCATTAAGCTGTCTGATATGGAA
GGAAGATGGGAAGGTTATTCCTCAAACAAAGACAGAACTGTATGATAACT
TGCTGATGTGTATCTGTATGAAGAAAGGAATAGATATGCCACAACAAAAG
GTTCCACCAGGCTTGGCAGACACACTGCTTAAGCTGGGCAGATTCGCCTT
AGATGCACGGTTGAAGAATAGTGCTTTGCTTGACATGTCACCTAGTCTCC
AACACAACATGCTGGAATGGGAGATGTTGCTAAAGCTTGGATTGGTCTCT
CTTGTTCCTGAGCCTTCCCCTTCCCAAGTTAATGGTAGTAAACAGTTGGC
CTTTTCCCACAAAACCATGCAAGAGTTCTTGGCAGGGAGGTATTTAGCTC
ATGCCATAATGAATGTTGATGTAGGTGAGATGACCAAAAGAATCACCTCC
ATGGCCAAAGTGTTGGATTTTGGTAACTTGCTTCAACTCACATGTTCCTG
TGACTCGCAGGCAGCACAAACAGTAATGCAGGAACTTGGCAAGCTAAGTA
AGATGGAATTCTCAAACTGTCCCTTTGGTGATTTGGAAGAGGCATATGCC
CCAGTAGGATGGGTCAGGACATCAGCACAGATGTACCGAAAATTTGTACA
TCTCTCTCTGAACATCCTCCATGACAGAATGGAGCCAACTCTTGTCCAGC
TGATTAGCAAAGCCCTGCCTCATGCCATCTTCCACTTCAAGGTCCCAAGT
AGAGAGGGGGATGCTTTCAAGTATTACTTGAAAAATCTTCATCCATCATC
CTTCCCTGAAAGGCTGACGCTTCAACTTCATAGATTCACGAGGAGCGGAG
ATGCAGTTGACTACCTTGAGAAATGCCTTTCTCGCCCAATATCTGGTCTG
AACTTACATCTTCATGTACCAGGGAGCCCTTCTAGATGCAATGATGAGCT
GGAAACTACCAAGCTAGTTTCACTTCTAAGGTATCCACATATTAGGGCAT
TGCATCTATCATGTAGAGCACTTACCCCTTCCACCCTGCAGCCAATTGTG
TCTCGTGGCTTGAAACAGAAATTGCCTTTGTTGGAGGTACTTGATCTTTC
TTGGAACAGTGAACTTGGGGATGAGGGGATAAAAGTCCTGATGTTTGTAA
TACGCCATCTTCCAGCGCTGGCTGTCCTGCGTCTTGCGTTGGTCGGTATG
ACAACTGCTGGCACACCATTCCTTGCTGCTGGTATGCGCCAATTGAAAAA
ACTGAGAGAACTGGACATCAGTCACAATGAGATCGGAGACACCGGGATCA
AATCCCTGACCAATACATTACACTATCTCAGCACCATAGAGGTGTTGATT
ATGGAACAGATTGGACTCAGTGATACAGGAATAGTGCTTCACTGCCTGGC
TAACCTAAAGAGACTGGAGCACCTAAATTTGAGGTCGAACAAGATAGGAA
ACTCAGGAATTGTCTCTGTTGTCAAGACACTGCATGAACCCAGCAAGGTA
AATATTGGCGAAACTGCAAATGTGGTTAAGAGTCTGACCACAATCCCTAA
CTACAACAACACACTACTGGAGCTGTACATTGGGGGAAATAAAGCAAAAG
CACATGCACTGATAACAGTCTTGCAAGAAAGCATCTATTTGCCTAACTTG
ACCAGACTCGACATATCAGGAGACTGGTTCTCGCATACAAATTTGGACGA
CACTGCTGCAAGGAATGTGGCAGAAGCCCTATCAAAGCTCCCTGCCTTAC
AAATGTTGAACATGAACAACATTTCCATGACTGCTGAAGGCTTCAAAACT
ATACTAAAGGCTGCTGAGGATCATCCTACATTGCAGCAGTTGCACTACAC
CCGTTCAGAAGTTCCTGATGGAGTGGACACTGGTGCCAGCTGCTTGCATT
TGGGGAACCCGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113833-exon-Sc0000231-1564993656:126315..129241 | BlTCONS00113833-exon-Sc0000231-1564993656:126315..129241 | Branchiostoma lanceolatum | exon |
| BlTCONS00113833-exon-Sc0000231-1564993656:130663..133302 | BlTCONS00113833-exon-Sc0000231-1564993656:130663..133302 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000231 | genome | Sc0000231:126315..133302 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055803 |
|
