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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000231:40982..47993+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113820 ID=BlTCONS00113820|Name=BlTCONS00113820|organism=Branchiostoma lanceolatum|type=mRNA|length=7012bp|location=Sequence derived from alignment at Sc0000231:40982..47993+ (Branchiostoma lanceolatum)
CCGGAAGTGAAGGGGCCTCGGCGTAAGGGGAGGAAACCTAAAAAAGTGGG
ATGCATATATGGCAGAAATAATCATGTTTTCGCGCCGATTTTGAGGATTT
TACCGTCCAGAAAGTAACTATATTTTGTATAAAGGTTTGTAGAGACATCT
GATTGCAATGGATGCCGACGGCTTGCCTTTAGTAGGCCCAGGAGTGGACT
ACACTAAGGTATGTCACGTTTTCGAAAGAGTCCTACGACATATAACAAAC
ATCACAACCTCGTGACTTTTCTAAAATCACAAATGATTTGTTGTAGATTT
AGATTAAAAGTTATCTTTTGAGTTATGATTTTATACTACAGATTGCATCA
GGCTATGTGAAAATATAGGATATGTGTACATGATTCATTCGTATAGAACT
TAATTAAGCAGTTTTGTATTATAATAATAATAATAATAATAATATCAGGT
GTATTTGCAGCCAGTGCCACAGGCAGGTACCCAATGTGTAGGGTAATGAG
GCTGTTTAACGTGTTCGAGGCACCTCCTCGAGCACGGGACCCCCGTTTTA
CGTCCCTCCCGGAAGACGATTTCGTGGAAAGCTTCGTGAGGCTACAGCAA
TCCGGACGTCCTTGGTTGGTCTCCCATCCAAGCACTGTCCGGACCGCGCG
TTGCTTAACTTCCGAGATCGAGGGATCGGGTGTATCCAACGCGCCACGAT
TATGACCTTTCCCTGACTTCTGGAAATTTCGAAAGAAAACAAATTAAGTT
TCCAACATTTCATTGGAATCAAATTTCACACAGTAATCTACTGTTTTACA
AGAAGTACCCGTCGATGTCTAGGGATGTCACTGCCGCTCAACTGATAGCA
GCCTCACAGTACTAGTTGAGCTCCTGGTTCGTAACTGGGATACCATGGTT
CAATCCTGGGAAGGGCATCTCAGTTGGGGCTGCACCTGTCTTTCAGAAGG
GATGTAAAGTGGGGGTCCTGTGTTCGAGGAGGTGCCTCGAACACATTGGC
TAGCAACCCCTCCCTGTAAAAATATACCCTGCAACAGAAACAGATACAAA
ACTTGCTGCCATATGTGCCACTAGGTACTACAAGGTTTTGAGTTTGAGTT
GAGTTTATGAACAACAACAACCCCTTAATTAGCCTGGGCGCCATCCTATT
TCTACCGGGGCTCCTACATTCGAATGTAGGAGCCCCGGTAGAAATAGGAT
GGCACCCAGGCTACCCCTTAATGTCTTGACACTGTTGTTACTTACTGCCA
CATTTTTGGCAACACCTCTAGATCGGGGCCATCCACCAGAAGAGGATGTT
GGCCTTCATCAACCATTTCATCACCCACACGGCACGGTTCCTCAACAGGT
TCTCTTGTGTCTGTGAAGAGGTCGGTCAAGTTTACTCGTTTCTTGGTTTG
TAAACTCCATGAAAACAGAGATATTGTAATCAGTTGATTTGTTTGTTTGT
TTGTTTGTTTGTTTGTTTGTTTGTCTTGGTGTGCATCTGCACTTACAATG
CATGTCAATATTGTAGAGTATTACAGCATGTAAGGCGGAAGCGGTGTTAT
AGGTACTTGGAGAATTGGAAGTCTGGTTTCACTCTACCTATCTTCATTTC
TATAACACTTGGACCATACAATCATAGGCCACCACAGTAGTGGGCGAGTC
CACACTGGTGGTGGTGTGTGGGTTCAACTGCCATACTTTTTCTCATTTAA
GTGCTGAGTGCTAAGAAGAGAAAGCAGTCAGGCCATTGCACCAGTTGCTG
ACTTCAAAGAATGTATTCTGATTTTCTTTTCATGCAGAAACTTGCCAACA
TCAACCTGAGAATACAGAGAATAGAGACAACCATGAACATACTGGAGGCT
AAGGTATATATGTGGTCATTGTGTCAACATGACTTTAAAGATTTACATAG
TGCCCGGTAACTAGTGCCCGTAATTTCTTCTGTCATGATACTAGTAGTGC
ATTGTTGTTGGTACATACGCATGTACATGCATCTACTGTTGACCTTGTGG
TAGTTTCATTTCACAGTGGGAAGAAAATGGAGGTTTTCACAGTGTTTTCA
ATTTGCAGCTGAAACAGTGACATTGTATGTTGTACAGTAGTCATACCAGG
GAGACATGTTCACAGCTAGCCTGATTTCAATCGCCCTTCTAGTCGGCAGC
TGCCTGTAACTGCTAGTCCGCGGGGAGGGGACAGAAACCCCTGGACAGCT
GGAGTTTGCGTTATACAGACTAGTTCACGGCATCATGAATTCGCGGTGGA
AAAGCTGTGAAAACTACAAAAAATAAATTTTAAAAAAAATGCAAAAGTTT
CAAGATTTGCGGTATACAGCCTCCATGCATCGGGAGTTGATGCCTGCAGA
TTTGATGGTTTCAATGATTTCCTTTCTTCACTACACTATTTGCCTGTACA
ACAGACAAATGCACATTGTCTCATACTGTTGTTGTGGTTAATGTCCTTGC
ACTGTGTATATAGATCTGATTTGTAAAATGAACCCAATTCAGGAGTACGT
GTACATGTATTTTGTGTAATATTATGTGTTTTTGACATGTTGATTTAAAC
GAATAAAGATTTAACTCGCATGATTGATTGATTGATTGACACTGTTGCTA
TGTTGCATGGATCCAAAGGTTCAACTTGCCTTCTTGTTTCTTGGTGCACA
GATAGCCTCCATTCCTGGTCTGGAGAACATCACAGGGGACAGCGCCCCTC
CCAGCACAGCAGGGACAGCAGGAACAGCAGGTACAGCAACATCAGCTGCA
CCAGCTGCCAGCATAACCTCGGTACAGCAGCCAGCAGAGGCGGAGGTCAG
TCTCTTACTTAGTCAAACCTGTAGAAATGACCACAGGTTGTACATAAGGG
GGCACACCCCAATTTATTTGGGGTTTCAATTGGAGGCTGCACACCCTCAA
GTCTAGGTACCTTCTCTTCCAGGGAATTATTCTGAAGTAAAGAAGCTGTG
TATGGGATGAAGGCATATCCCTTCCGCTACGAGACTGAGTTTTGTTTCTT
CAACCTCTCCATTTTTGGTAAATTAATCCACACCAATTTTATTTTCTGAA
AAAAAATTGGAGCGACAAGGAAAAAATAAAATAAAAATGCCAAATAGTCT
GGGGTAAAGATAAGGGTTTTACATAACATAAAGTTTCAGCTTTGTATGGC
TCATTTTATGCAATGCACCCCTTTCTTTGATCTGTAATTTCAGTAACAAA
ATTACCTTTTGCCATGTGATATATGGATTGATATTGAGAAATAGTTTTGA
CAAATGAAAAATTATAACTTATGATAAAATGTGACCACACTTTTCAGGTA
TGTGCAGACCTTTATAATCTATTTTGGTGGCTATTGAGTTTTAGAACTGA
ACAAATAGTAAAATCGTGAGTAAAATTTGTGAATGAGAATAGTGACCAAA
TTCTTTTCTTCAAAATGGGAAAAACAGGAGAGGCTATTCCCAGAAGCAAC
AAAAAATTGGTGTGGCCTTAGAAGGCAAAAAATCATTTTCACATCAAAAA
TGATTCACAATATTTGGCATTTATACATAGGATAAAATTCATGGAACATT
TTTTTTCAGCAAAAACGACTATTGTTGTCAGAAAGAGAAAAACCTGGCGT
ATAATCAAGCCCTTTTCGACACAAGCATTAAGAATCTTGTCTATAGTGCG
CACCTGTCCACATAGACTAGAGACTAGATTAAATCGGACCCCTGAGTGGT
CTGTGACTGTATTTGTGCCTTCCTATGTAAGGCTACAAAAGCTTGATTTT
TAAGGCTAACACCCCTGAAAATTAAACGCCTAATCTGATATAACTGTGGA
AAGGAACAAATGCAGCACATCTTGTAGACATGTAACAACACATCTGCTTG
TTTTGTCTCTGCTCTGCATTGAAATGCATTATTCCTATCTGACGGAAGAT
AGCAGATACTGTCTGAAACGTCTGACTGTTTCAAAATTTTATCCAGTTGC
TTGAGTAACTGTTTTTTGGCGTATCTTATTACCTGGATGTCTAACCGTCA
TCAATGTATTCTTCCTATCTATTCTCCATCCTTCCACAATGTCAGGCTGT
TCCAGTAGCTGCTCCCCCTCCCCCCGAAGAAGCGGCCCCAGCAGCTCCCA
CCATGACGGTGGCACAGGACCCACGATACGCCAAGTTCTTCAAAATGATA
AATATGGTGAGTCGTCGTCTTGTAATCCACTTACACCTCCAGTTCCACTT
CAAAGGAGGTACTGTAAATGCAGAAATGTTCGCGGTGGTTTTATGTTCGC
CTTTTTCATGGCAAACTTAAAACCACCGCGAAAAGCCGTTCCATTGTGTG
ACTGTAGCGCTACTATTGTTATAAATGTGAACTCAAAACTACCACAAACA
TTTCTTTTCTTCTTACCGTGAAATTAAATCCCCAGAAACATTTCTGCATT
TACAGTAACACTTCAAAGGAGATACATGTTTGTCAGTGCTTGTCATGTTT
TCGAAATCTAGTATACGGGCTTGACGTCATTTGCGCCATATTGGATTACA
GTGTACGTCTCTTGAGGGCCCCCCGAGCATTTTATGAGGCTTGAAACTTC
TATTCATCTCTAGACATATTAAGTTTCAATAACACCATTACATATCAACA
TTCAAGGAGCAAAGATGCAATGTCGTGTGGCGAGAACTGATAGAAAATCC
AAGCGCTGCCAGCGATGCCGGGAGCATCCTTTTTTTTTCAAATCTTCAAA
TGCTGACATGATGCTGGTGTAATCAAATTATCCGCCTACATGCTCGCCGC
AGGATTCAAATTATAATTGCTTTACTGTCAAGGAAAAGTCTCTATAGACA
TGATTCCTGATCTTACATAAAAGACACCAGGATTCAGCGTTTCTGCTGAT
ATCTTCTACGAGTACATGAATAATATACAGTCAAACCTGTACAAGTGGCC
ACCTCTACGTAAGGATCACCTGGCCATTGTGACCACTTTTTAGGAGTAGA
TATTATTTCTGATTGATACAAGCATTAGGAATCTTGTCTATAGTGACAAC
CTGTCCGCAAAGGCCAGATTGGTCCCATGAGTGGTGTTTTGGGACATTTG
ATTGAAGAATGAAGAGCTTCTGTCGGTAGTGTGCTCCCTGATAGTCCTCC
CTCTGTATCTGTTACGTAGTGTGTTTTGCTTTTCCTTTGCAGGGTGTCCC
TGTCCAGGCTCTGAAAGCCAAAGTTATGATGGAAGGACTGGACCCAGACC
TATTGGAGTAAGTTTGCTTCTCTATTCCTCCTTACCTCTTCTCATTCTCC
TCTATTTCCTAGTTTGACTGTTGTCCCTACCTCTTCTCATCAATTTCGTA
GTTTGGTCGCAGTCTTTACCTCTTCTTGTCTCATTTATTTCTTTGTTTGA
CAGTTTCCTTACCTCTTCTTATCTCATCTATTTTTTAGTTTGGCCATTGG
GGCACCACAGAAGATCTGACAGTTTTCTCCACCCTTCTCGGTTTTCTGTT
GTTCTTAATGTTTCGCTTGGTTTAATGCCTGTCCATTCGCTGATATTATC
CTCCCATTTTTCGTTGCCTACCTCTTTCTTCCTATCTGGACGGTTAGTGC
TGCGTACCGGTACTGTGTACCGGTACTGTACCATAAAAATCGATTAGGCA
CAGGTCCAAAATACCGGATCATGAAGTACTGGTACTGTACCGATATAAAT
CTACACCAAGTATATGCTTATTTTGTGACCTCATAGCCTCATGCAACACC
AAACATGACCAAAGTGACATTCAGGAGGGCCAGGAGTTTTGATAGCAAGG
CCAAGGGAGTTTGGTAGTAGGAACCTAGTTATATTCTTAGACTAAAGATG
CTGACAAGTTGTAAACAGCTTATTAATGTTTCTGTCATTGTTGAAGAAGT
TCAGAAGAACACATGTTTATTTGTAAAAATGTTTAGGTACAGGTACAGGT
ACCTGTACCTAAACCTCTGTACCAGTACCTGTACCTGATGTTACGTTTAG
GTATGCAGCACTATGGACGGTTCCTTGCATGATAGTTTTTCCAATCCCAA
TGACTGTGACACATGTCCGTACCACTTGAGTTTTATTTTATTTTATATGG
TGAGGTCTTCATACAGACCAATGTTTTGCTTGATTCTATTCCATACTTCA
CTCTACCTTAAATCTATTCCTTCAAAATGTTATTTGCATCCTAGCTATTC
CCCAATGTCCTTGCTGTTTCCTAAATACTGTGTTTCAAATATACTCTTTA
TCTGCTAGGTTTGTCATGTTTGCCTAATCAAGTATACGGGCTTGACGTCT
CTTGAAGGCCCCCCCAGAGCATTTTAGTGAAACTTCAATCATTTCTACAC
ATATTAAGTTTCAATAACGCTATATCATTACATAACGACATTCAAGGATC
AAAGTTGTGATGTTGTTGTGTGGTGAGATCGAGAACTGATAGAAAATCCA
AGCGATGCCGAGAGCATCCATTTCTTTTCAAATCTTCAAACGCTGACATG
CTGCTCTGTCTCAACTGTAAAATGTTTTGAGTGCAAAACCGAACTTGCAA
GAATCTTTCTGTTAACAGATTGGGTGTTGATATCAGCAATAGATCAACTT
TTACTTGTTTAGGAAAGGTTGTTATCAATAATGTATGGGTGCAAAATGTT
ATCCTTATGATTGAGGGTATAACTGCATTCCAGCACTCCTGATGCCCCTG
CCCCAGCTGGAGCAGTGCAGGAAGACAGTGACAGTGAGAGCGCCAGCAGT
TTCAGTGACAGCGACTAGTTGTCAATATTTCACTACAATCAAGACTAATT
TCAAAGAGAAGAAAGTGAAAAGGATGAAAATCTTTCTAAAAAGAGTGAAC
CAAAATGTCTTATTCATTAACTTTTCCTTTTTTTTGATGGGAAGAAAAAA
TAGAAGTACATTAAAGATTCATAGAATACAAATAAATTTTGTTATTAGAA
ACAAAATACATTCTGTCCAGTTGCCAACACCTAATTTGAGTGCTATATTT
CGAAATGGTTTCAAGTGAATAAATTGTAATAATTAATGTACAAATTTGTA
ACAAATTTGCCA Coding sequence (CDS) from alignment at Sc0000231:40982..47993+ >BlTCONS00113820 ID=BlTCONS00113820|Name=BlTCONS00113820|organism=Branchiostoma lanceolatum|type=CDS|length=621bp|location=Sequence derived from alignment at Sc0000231:40982..47993+ (Branchiostoma lanceolatum)
ATGGATGCCGACGGCTTGCCTTTAGTAGGCCCAGGAGTGGACTACACTAA
GATCGGGGCCATCCACCAGAAGAGGATGTTGGCCTTCATCAACCATTTCA
TCACCCACACGGCACGGTTCCTCAACAGGTTCTCTTGTGTCTGTGAAGAG
AAACTTGCCAACATCAACCTGAGAATACAGAGAATAGAGACAACCATGAA
CATACTGGAGGCTAAGATAGCCTCCATTCCTGGTCTGGAGAACATCACAG
GGGACAGCGCCCCTCCCAGCACAGCAGGGACAGCAGGAACAGCAGGTACA
GCAACATCAGCTGCACCAGCTGCCAGCATAACCTCGGTACAGCAGCCAGC
AGAGGCGGAGGCTGTTCCAGTAGCTGCTCCCCCTCCCCCCGAAGAAGCGG
CCCCAGCAGCTCCCACCATGACGGTGGCACAGGACCCACGATACGCCAAG
TTCTTCAAAATGATAAATATGGGTGTCCCTGTCCAGGCTCTGAAAGCCAA
AGTTATGATGGAAGGACTGGACCCAGACCTATTGGACACTCCTGATGCCC
CTGCCCCAGCTGGAGCAGTGCAGGAAGACAGTGACAGTGAGAGCGCCAGC
AGTTTCAGTGACAGCGACTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113820-exon-Sc0000231-1564993656:40982..41189 | BlTCONS00113820-exon-Sc0000231-1564993656:40982..41189 | Branchiostoma lanceolatum | exon |
| BlTCONS00113820-exon-Sc0000231-1564993656:42253..42351 | BlTCONS00113820-exon-Sc0000231-1564993656:42253..42351 | Branchiostoma lanceolatum | exon |
| BlTCONS00113820-exon-Sc0000231-1564993656:42769..42834 | BlTCONS00113820-exon-Sc0000231-1564993656:42769..42834 | Branchiostoma lanceolatum | exon |
| BlTCONS00113820-exon-Sc0000231-1564993656:43633..43776 | BlTCONS00113820-exon-Sc0000231-1564993656:43633..43776 | Branchiostoma lanceolatum | exon |
| BlTCONS00113820-exon-Sc0000231-1564993656:45027..45137 | BlTCONS00113820-exon-Sc0000231-1564993656:45027..45137 | Branchiostoma lanceolatum | exon |
| BlTCONS00113820-exon-Sc0000231-1564993656:46124..46188 | BlTCONS00113820-exon-Sc0000231-1564993656:46124..46188 | Branchiostoma lanceolatum | exon |
| BlTCONS00113820-exon-Sc0000231-1564993656:47615..47993 | BlTCONS00113820-exon-Sc0000231-1564993656:47615..47993 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000231 | genome | Sc0000231:40982..47993 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055797 |
|
