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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000230:433348..440391- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113803 ID=BlTCONS00113803|Name=BlTCONS00113803|organism=Branchiostoma lanceolatum|type=mRNA|length=7044bp|location=Sequence derived from alignment at Sc0000230:433348..440391- (Branchiostoma lanceolatum)
CAGGTAGTCATCAGTCTGCACATCCTTCCTTCCTCATATATAAAGCTATA
TCTTTGAAAAGTAGTTCTTAAACTGTTATGACTGGAAAGAATGATGATGA
ACAATGGAACTTATATTTGTTTGTCATAGTGATGAGAGACGTTTTGTGAA
AAGAAGTTTCATGATATGTAGATGTTTTGGGGCAATGGACAAAGAAGTAC
CCCAAGTTGCCCATGTCAAATAACAGTATTTTAGGTGATTGAAAGAAATT
GTACATGATACAAAATTTGACTTCATCAATTGTCGTTATGGTATGTTGCA
GGAATTCTATCCTAAGTATTTGTATCATTGACTGAATACCATTTTAAAGA
TGTTGTTCTTTTGTCCATGGCCAGGTATCCCAGAATAAACAAGGAGTCCC
TGCTTCCCATTGCAACAGATGTGTCTGAGTCCAACCTGGAGGCGTAAGTA
TATTTGAAGTATCAGGGGTTTGTTCCACTTTTGTGGCTGGAACGTACATG
GCAAATCAAATAAAGCAAGTCGGGTAGTGTAGCTTTTTGTTTGAACTGCA
GTACTGATGTCTGCCCCTCCCTTCAGGTGGTATCCGCCAGGACATGGGGA
CACCTACAAGGCTTTTGCAGAGTCTGGTCTCTTGGACCAGTTCATTAAGG
AAGGCAAGGAATTTGTCTTTGTTTCCAACATCGACAACTTAGGAGCAACT
GTGGACTTCAGTATCCTTATCATTGTTTTTTCAAATGCTGTTCTATCTTT
TTATGCCATAACTTGGATACAATATTGAATTAACATGTGTAGTCATGCTT
CTTGTCCTATAGTTTGTACAATTAAGAACCTTTTGTGAAGAGACAGTTAT
TATTTGTGGATTTGATGATGTGGATTTGTATCCCGAGTAACCTGTATATG
TAATAGCCTGAGGTGCCTTCCATGCCAAGCAAAATAAAGTTACAACCTGC
TGCCAGAATTGTACAGATCAAAACATGTTATTGTACAGGGGAAAGTTCCT
GTAATGTAGTTTGTGGAATTGCCAGTTATGACCTTAATTGAAAAGGCATC
TTGAACCATATGGTGAACCCACCAAATGGCCCCATGAGTGAATATGTCAT
GGAAGTGACGGACAAGACACGGGCTGATGTCAAGGTGATGTACATCCACA
CTTTTGTATTAAGCTCTGATTTACAGGTTTTGTGCTGAAATCATGCATAC
AAGATGAAGAGATGTACTTTTTATGGTGTGTGTGTTCTGCTGGCATTGCA
GCTGTTTGTTCCTTTGTGCTTGGTGTAAACTTGATGGATGCATTTATCAC
AATATCAAATTGGCTAAAGAAAATATATACATTGCACTCAATATGTGGTG
TCTAATTCAACGTTTTCAATTATGATTTTTGCTCAACGCTTACTAAGTTT
GTTTATGTTTTTACTGATTTAACATTGCAACTCTGTATCTTACCACCACA
GGGAGGCACATTGGTAGGATATGAGGACAAGCTACGTCTTCTGGAGATTG
CACAAGTGCACAAGGATCATGTAAGTATATGTTCTTTTGTGTGATTGTGT
GATTCTCTGTTTTGTATTCAAGAATTACTGTTATTACAAGAAAGCTGTGA
TACACCTCCCCTCAAGTGTCTTGCTTTTTAAATCGCATTGAAAACATCAT
ATAATACCTAAGGGGTGTCACATGTAAAATCAGCTATTTATGACCTTGTA
CTTTTGCTTTCTTGTTAATACAGGTCGATGAATTCAAGTCAGTGACAAAG
TTCAAGTAAGTGTGTGCATTCTTGATTTCAAAGCTGATGATGGTTGACAT
TTAAAAAGGTCTCCTCCAGATAGATAGGTAAATTATGAAGTACATTGTAC
ATTGTGTTTGCAAGACTGCATCAAAGACTGCAGAGCAGTTTCTCTTGGAA
AGCAATAAAAGGGCTTAATTGAAGCCAGAATCATTAAGATAGGATGAGTT
ACTCTAATGTATATACAACACCACTGATGCTGAGTACACGTTTTGTCTGA
AACAGGAACCTAAAATCAGCATGGTAAACATTTGCAACAGAGTTACATTA
TTTCACTAGACTTGTTTGTTATCAAATTGTAGCAAGTCTGAATTTTGCTG
AAGTTTCTCCTGTATAACCTGGGACATTTTCCTGCAGATTCTTCAATACA
AATAACTTGTGGATGAAACTTTCTGGCATGAAACGCCTTGTGGACAAGAA
TGAACTTGACATGGAGGTCATTGTCAATAACAAGGTCAGTTATACCAAGA
TAACATTTATATCAGAGGCTTTATTTTCTGCATTTTGATACTTAGTAAAC
CAAACTAACATTTGTGTTGACCATGCTTACATTTCACTACTGCTTCCGTG
TTATTGCCAATTCCAGTCATATTCATGCTATATCACTTATTATTGTTATA
TCAGCTAGGATTGGATGTGGGGTAGCAACTAGAGGTTATTTCAGCATATG
AACGTGCATGTGCACATCTTTTATGACATCGTTCAGGATTTCTTTCTGAA
TAGCATTTTGTTGCGTGAAAAATTTGTTTTAAATGACAAATGGTGCATTT
GTTTTCAGACCCTCGGTGATGGGCTGGGTGTCATTCAGCTGGAGACTGCA
GTTGGGGCTGCCATCAAGAACTTTGACAATGCCATTGGTAAGTCAACTGT
TTACATTGTGAGGACTTTGGGAAGAACAAAATGTACATTATTCACATACT
GTGATATTATGTTGTCGGTTACTGTTGTGGGCAAACATGGGAAAATCTCT
CCTCTGTTTGTCTTTTTTGTCAGTGTTTTATTCTAGTCATTCCTAAAGAG
CCTGTGTGTATATTTTTCATGATAGCTGAAGCTGCTGTTCAACTGTTGTC
ATAGTACCTACTCTTATCAGTCAAGAAATGAGTGTTTTTGTAAGCAATCT
TTTTTCAGTTATTTACCTGCCCATGGTGTTCATTCTACGTTTAGGAGTCA
ACGTACCCCGGAGTAGGTTCCTGCCAGTGAAGAAGACGTCAGACTTACTG
CTGGTCATGTCTAATCTGTACGACATGGACAATGGCTTCTTAGACATGAG
TGCCAAGAGACAGTTTAAAACTGTTCCTTTAGTCAAACTAGGGTCTCACT
TTGAAAAGGTGAGTTCTCACTCTGCATTTGATCTGTAGTTAAACATCTAG
CTGTCCTGAGTGTAGGAAGACCATCAAAAGTGTACAAAATACCACTGTAG
TTGGTATTCTCATGATTCTTTTTAGAATTGTTTATTACAGCTTGCATTTT
GAAAGCCCTGTTGTTGCCACTGTCTCAGAAAATCTTATGAAATAATGAAA
TCTTAAAGTCTTTAACTCTGAATTTTGGAAATTTTTAAAGTTTTTGCATC
CTTCATAGACTGGAGAATAGAATTAGAGAATAGAAAAGAATTTTAATTAG
TAGCCACAGGGACTAATTATTCTGCTTATTACACACGTCACAGGGACTAA
TTATTCTGCTTATTACACATATAGGCCAGGACATACAAGAAATGTATTTG
TGTTCTGCTGGTTTCAGGTTCAGGAGTTCCTGCGGCGATTTGAGAACATC
CCAGACATGTTGGAGCTGGATCATCTGACTGTCTCAGGAGATGTCACCTT
CGGCAAAGATGTGTCCTTGAAGGTATAACCCATGTCCTTACTAGTGCATG
TTATCATTCCTCACAGGGTGTTCAATTGTTCATGTATTGCTTTTAATGGG
AGTTCCTTTTAATACCTTGTCTATCAATGATACTTGCATGACAGTTTTCA
GATGTCGGTAGACAATGTAAGAAACGGCTGTAATTTGAAATTCCTGGTTA
CTGAGATGTATTCACACGGTTGATGGTTCTTGGAAAGCTGAAACAATATG
TAAGTTGTTGGTTCATGATTTTACTTGATTTTACTTGTTTTCCTTGTCTA
GGGTACTGTAATCATTGTTGCTGAGCATGGGAACCGTATCAACATCCCTC
CTGGTGCATTACTGGAGAACAAGATTGTGTCTGGCAATCTTCGCATCCTG
GACCATTAGAACCCACCTTGTGCCGTGGACCATGGGATGTATATCTCCTG
CTCTACACAGCCTATATAGACTTTAGCCTATGTAGACCTGAATCATAAGA
CACAACCCAAATGTTTGACAAGACATAGTCATACATTGAAACCTTGATAG
TACAAAGTTTACAATGTTATTTTGCTTGAAATGATAGCTCATCCATATGT
GCTGCACAGAAAACTACATACATGTGACCCATTAGATGTAAAAGTCCAGA
TAAGTATTTATGATGACATCAAAGTAATAAGTGCAGAATAAGAGTTTTGC
TTCATAAGATGGACAGATCTCTGCTATTAAAAACTGCATCTTCATCAAAG
GCTAAAATCTGCATCAAAGGCTAAAATTCATCTTACCAGCCTTGCTGTAT
TGGGAGTTAGAAATGTCATGTTGTGGAATAGTGTAGTCAGCCTTCTGAGC
TGCTTCCATTAGTGAACATTAAGTACAGTTATGTATAACAGGTTATACTG
TTAGCTGGATGGTAGATTCAAAGAGTAAGAAGCTGTGATCTTAACTGTAT
ATTAGTGCATTGCTTTTCCGATTTGCAATGTAGTTGGCCACTGCTAGGCC
TTGAAATTTATTGTGTTACGTGATATTTTTAAGATTTTACATGATTTGAA
CAGATTCTAATATTAGTATATACATAATATAATGTATTTTTTTTACACCA
CGTAAAATTCTGTTTGTTGTAACAATCTAGGAAGTAACAAAAAGTACAGA
AAGAACCCATGCAAGCTGCTGATATGAGAAACAATATCTCAGCCGCATTC
ATGAAATATTAGATGTTCTTAAATCTACTGTAGAAAATTGGTTCAAATTA
TGCAATAATGTCCCCAGTTTTCTTCAAGCATTTGTTACCTGAGAAAATTT
TACTACTGTGTTATTTTTGTTTATCCTGACAATCCAAGGAATTGATACTG
TTTTGTTGATAAAGTCAATATCAAGAGACATGTTTTTTTAGACTTGCTTG
AAGCCTTTGGTTGTAGTAAAAAGGATTAATGGCCAAATATGAGATTGACA
AACTGAGATTGATAATATGGTATGAGATGAAACTATCATGGTGAATTCCA
ATTTAGATGGGAATGTTAAGAATTGGTTACCAAGTTTGAGAAACTCTATG
ATCAATTATAAGAAAACTGTTGTTAGACTGTAGAAAATACATTGCATGGG
CCCATGTTGTATGTCAAAGGAATTATGCTCATATCCATTGTGAGAAAGAT
GAAATATTACAATAAAGGTAGAAATGATATTCTTTGCAAAATGCTGTCCA
GTTGTGATCAGGTAGAAGGGCCATCTAAAGGTGTCCACTTCCAGCTATTG
AATGTTTTATGAATTATCTCTTCAGTATATATCAGGCATCTCCTACCCAC
TCCACTGCCTCTGATACTGACTGTAACCATCAGTGAGCTGTTTGGATCAA
TAGAAATCATGACAACATGACAGCTGTTTCTTCATTCAAGTTTTTGGTAC
ACAAATATTGAATCTTACAGTCCTAGTATGCTGGCTAAAAACAACAAAGT
ATGATCCAATAAAAACTTGAACCATCTTCGGGTCATCCACTCGACCACTC
CAAGAAGGAAGGTACAGTTCGGAAGGTAAGCAGAAAGTCTCTCCCATGTT
TGTGTGTTCAGATTTCATCTTCACAAGAATTTGTCTATGGACAAATACAC
ACAGACATATAATGCCTTGCAATGCTAAATAATTGTAACAGAATGTACAA
TCTTGCTGAGGATTCAGTAATGATGAACAAATGGGCCATGTTTATGTAGT
CCCAGATGATACTGGGTGTGGTTGTCTATATGGCCTGGCTATTAAATAGC
AGCCTGTGCCAGCCCCCTGATGGGGAGGGGTCTGTTAATAGCCATGGACA
GCATTATGTGCGTTGTATAGACACAGACTTACAGTTGTCTATAACCCAAG
TAAGTGACAGTTTTACGTTATACAGAAAAGACCTACACAGCCAATAATGG
GAAGATTCAATCATTTCTCGTTTATTTATTAATATTAGTAGACAAATACT
GTGACATCTACACAAGTGACATCTTTTACTTGAACCATTAACACTACGGT
TGTCCAGACTTTAAAATGTGACAGAACAGAAGGCAGTTGTATTTCTTGCT
ACAATTTCTTCTTTGTGTACCTGCAATTTGAAACTTCTAGTGTTCTTGAA
TGTCATTCACCAAACAGGCTCAGTAATAAAACTACTCAAAAGTATACATT
GTCATGATACAATGTCTCATAGAATTAATGTAAATATTCAGCTTTGCAGA
AACAGTGATTAGGATATGTGCAATATAGATTGTAGTTGGTGGTATGATGT
AATACCTCAAAGCCGTATCTGACATGTACTTCTACAGATAACTTCTCCTA
TTTTAACCTCCTTGCTTCTACTGTGGTTTGCTATAAATTTCTTTGTCATG
AACAGCAACAGCAGGAAGTTCCAAATGCTTTGTGCAAAGCTTTCATCAGT
GGTTGTCCATGTTTTTGTGCTATTTTCCAAGGCATTGCTACAGCAACATT
TCATATTTTTCTTGAAGTGCTATTGTAATTGCTGCTTGAAAATTATAGTA
CTGATTAGAATAAGCGTGCTTGTAACTATATGGTGGAGCTCTGATGTAAA
ATAAAAATGACTGAGTAATCCTCAACGTGTTATACAAAATACAAGAAGAT
GTAAGTAGATATTATAGTATCCCTGCTTTTGGTATACTGTGTCTTAAGCT
TCCCCTGGCAAAGGAATGATAGGTTATAAATACAAGTTAGTGAGGCCCAT
CACCCACTAAGCCCATATTTGTGACTCATACACTTCTTGACTTTCCACAG
TGAGATGAAATGATCATCATAAGAGGACCAATCCTTGCTGTCATCAGTCT
GGCGTCTCCACTAAGTTGTCTGCGGCATCCATCGCCAGTGCAGTTGCATC
TTGCATTTTTAAGATCTCGGCCAAGGCACAATATAGGGGTTCACAGAACT
TGGCATAACCAGAACTGAAAGAAGAAGAAAATCACTGTATAAAT Coding sequence (CDS) from alignment at Sc0000230:433348..440391- >BlTCONS00113803 ID=BlTCONS00113803|Name=BlTCONS00113803|organism=Branchiostoma lanceolatum|type=CDS|length=948bp|location=Sequence derived from alignment at Sc0000230:433348..440391- (Branchiostoma lanceolatum)
GGGTATCCCAGAATAAACAAGGAGTCCCTGCTTCCCATTGCAACAGATGT
GTCTGAGTCCAACCTGGAGGCGTGGTATCCGCCAGGACATGGGGACACCT
ACAAGGCTTTTGCAGAGTCTGGTCTCTTGGACCAGTTCATTAAGGAAGGC
AAGGAATTTGTCTTTGTTTCCAACATCGACAACTTAGGAGCAACTGTGGA
CTTCAGCATCTTGAACCATATGGTGAACCCACCAAATGGCCCCATGAGTG
AATATGTCATGGAAGTGACGGACAAGACACGGGCTGATGTCAAGGGAGGC
ACATTGGTAGGATATGAGGACAAGCTACGTCTTCTGGAGATTGCACAAGT
GCACAAGGATCATGTCGATGAATTCAAGTCAGTGACAAAGTTCAAATTCT
TCAATACAAATAACTTGTGGATGAAACTTTCTGGCATGAAACGCCTTGTG
GACAAGAATGAACTTGACATGGAGGTCATTGTCAATAACAAGACCCTCGG
TGATGGGCTGGGTGTCATTCAGCTGGAGACTGCAGTTGGGGCTGCCATCA
AGAACTTTGACAATGCCATTGGAGTCAACGTACCCCGGAGTAGGTTCCTG
CCAGTGAAGAAGACGTCAGACTTACTGCTGGTCATGTCTAATCTGTACGA
CATGGACAATGGCTTCTTAGACATGAGTGCCAAGAGACAGTTTAAAACTG
TTCCTTTAGTCAAACTAGGGTCTCACTTTGAAAAGGTTCAGGAGTTCCTG
CGGCGATTTGAGAACATCCCAGACATGTTGGAGCTGGATCATCTGACTGT
CTCAGGAGATGTCACCTTCGGCAAAGATGTGTCCTTGAAGGGTACTGTAA
TCATTGTTGCTGAGCATGGGAACCGTATCAACATCCCTCCTGGTGCATTA
CTGGAGAACAAGATTGTGTCTGGCAATCTTCGCATCCTGGACCATTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113803-exon-Sc0000230-1564993656:440389..440391 | BlTCONS00113803-exon-Sc0000230-1564993656:440389..440391 | Branchiostoma lanceolatum | exon |
| BlTCONS00113803-exon-Sc0000230-1564993656:439949..440018 | BlTCONS00113803-exon-Sc0000230-1564993656:439949..440018 | Branchiostoma lanceolatum | exon |
| BlTCONS00113803-exon-Sc0000230-1564993656:439682..439815 | BlTCONS00113803-exon-Sc0000230-1564993656:439682..439815 | Branchiostoma lanceolatum | exon |
| BlTCONS00113803-exon-Sc0000230-1564993656:439258..439346 | BlTCONS00113803-exon-Sc0000230-1564993656:439258..439346 | Branchiostoma lanceolatum | exon |
| BlTCONS00113803-exon-Sc0000230-1564993656:438872..438940 | BlTCONS00113803-exon-Sc0000230-1564993656:438872..438940 | Branchiostoma lanceolatum | exon |
| BlTCONS00113803-exon-Sc0000230-1564993656:438637..438668 | BlTCONS00113803-exon-Sc0000230-1564993656:438637..438668 | Branchiostoma lanceolatum | exon |
| BlTCONS00113803-exon-Sc0000230-1564993656:438158..438254 | BlTCONS00113803-exon-Sc0000230-1564993656:438158..438254 | Branchiostoma lanceolatum | exon |
| BlTCONS00113803-exon-Sc0000230-1564993656:437755..437833 | BlTCONS00113803-exon-Sc0000230-1564993656:437755..437833 | Branchiostoma lanceolatum | exon |
| BlTCONS00113803-exon-Sc0000230-1564993656:437284..437447 | BlTCONS00113803-exon-Sc0000230-1564993656:437284..437447 | Branchiostoma lanceolatum | exon |
| BlTCONS00113803-exon-Sc0000230-1564993656:436770..436874 | BlTCONS00113803-exon-Sc0000230-1564993656:436770..436874 | Branchiostoma lanceolatum | exon |
| BlTCONS00113803-exon-Sc0000230-1564993656:433348..436490 | BlTCONS00113803-exon-Sc0000230-1564993656:433348..436490 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000230 | genome | Sc0000230:433348..440391 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055790 |
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