BlTCONS00113802 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113802
Unique NameBlTCONS00113802
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000230:427659..429467-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113802 ID=BlTCONS00113802|Name=BlTCONS00113802|organism=Branchiostoma lanceolatum|type=mRNA|length=1809bp|location=Sequence derived from alignment at Sc0000230:427659..429467- (Branchiostoma lanceolatum)
AGTTATCGAGCTCCTAGAAACATTGGTAGGAGATCCTCTTCAGGTCAGAG TTCAGACAGCTGAGATGGGCAAAGGCGTGTGCGAACTCTTCTCCCACTCC GTAACAGATCCTCTACGTTTCTTTGGTCCCTGATGTTGCTACACTAGAGA GTTTCATCGAAAGCAGCTACTTTCGACCATCTTGTGAATTTCATAGCCTC TACGTACTTCAGTTAATAGTTCAGACAGGGCCGTATCTACCACACTGTTT CGCCAACCACGTGCGCAAGTTTTGGAACATGGCTGACGAAGAGGACAAGT CTGGAGCTGGAGTTGGTAAGCTCAAGGGGAGTAAACAAACAAAAAGGGCT CCGAGATACTTTGATGACAGTAGTGATGTGACGTCTAAGGACAAACACGA GAATGAGAAGCCTTCAGAGGGGAAGTCTGAAGATAAGAAGAAGAAATCCG GTAAGAAAAGGACGTCTGCCCCGGATGGTGACCATGCGGACACTAAACGT GGGAAGGAGTCGTGGGACTCAGACGAGGAGAAGGACCCGTTCCCGGGAGA GGCACCTGTCAAAGAGGAGACCCTGGCACGGTACACGAGAGGAGAAGGGA ACAAAGTCAAGGTAACTGATTTTATGTCTGAGTTTATGTCTGATTTTTTT TTCATTAGACACTATAGAATTTGTATAAATATTTAGAGTAGAGTAGAGTA GATCCTTTCGGCCAGGTAGGAAGGTCATATTCCAATTTAGGCCGCTCATC CCTTTATTGGATCATGATTCCAGGCTTGTGAGGGCAGTCTAGTGCTTTGT AGTTGTAGACTACTGGGTGGTGTTCCATGTGTTTATCGAGTCTGTTTTTG AAAGTGTTCACTGTTGGTGCCTCTACGACTTCTAGTATTTGTATATGGAC CACAGAAACGTAACAAACTTGTATAGGGATGATTCACAAAAGATGATTGT GGTATCATGTCTATGTTATCGTAAAAGCCATGGCTGATGGTTTAAGTTTC TATTTTTTTTATTTCTTTCAGATGCGAGCAAAAACTGCTGGACCAAAGCT GCAGCGGAAAACAATGGAGAAGAAGTTCCACCTGGCAGCCAAGCAGGCAG CCAGGGCAGAGCTGTTGCTGGGCGAGGACCATGGTTACCTGGAAGCATCC GATGATGAAGATACAAGTCAGCTGTCTCAGACTGACATAGCAGATGCTGT GGATATCAGTGCAGCACAGAAGCACTTTGACCTGAAGCTGGACAAGTTCG GTCCCTACAGGATGAACTACACACGGAATGGGCGGTTCCTGGTCATTGGA GGCAGAAGAGGGCATGTGGCAGCCTTGGATTGGATGAGTAAGAAGCTTCT GTGTGAGATCAATGTGATGGAGGGGGTGCATGATGTGAAGTGGCTTCACG TGGAGACCATGTTTGCTGTGGCCCAGCAGAGGTGGACGTACATCTACGAC CATCAGGGAGTCGAACTGCACTGTCTTAAAAAGTTCAATAATGTTCTTAA GATGGAATTTCTCCCCTACCATTTCCTCCTTGCAACAGCTAGCTCCACTG GTTTCCTGCAGTACTTGGATGTGTCCCTAGGGAAAGAATTAGTTGCCATC AATGTGAAGCAGGGCTGCTTGAATGTCATGACCCAAAATCCACAGACTGC TGTGGTTCACCTTGGTCATGCCAATGGTACCGTTACGCTATGGAGTCCCA ATGTCAAGGAACCACTCGCCAAGCTGTTGAGTCATGTCACCGCAATACGT TCCATTGCCGTAGACAAGACAGGGACCTATATGGCCACATCCGGGCAGGA CCGTTACAT

Coding sequence (CDS) from alignment at Sc0000230:427659..429467-

>BlTCONS00113802 ID=BlTCONS00113802|Name=BlTCONS00113802|organism=Branchiostoma lanceolatum|type=CDS|length=1119bp|location=Sequence derived from alignment at Sc0000230:427659..429467- (Branchiostoma lanceolatum)
ATGGCTGACGAAGAGGACAAGTCTGGAGCTGGAGTTGGTAAGCTCAAGGG
GAGTAAACAAACAAAAAGGGCTCCGAGATACTTTGATGACAGTAGTGATG
TGACGTCTAAGGACAAACACGAGAATGAGAAGCCTTCAGAGGGGAAGTCT
GAAGATAAGAAGAAGAAATCCGGTAAGAAAAGGACGTCTGCCCCGGATGG
TGACCATGCGGACACTAAACGTGGGAAGGAGTCGTGGGACTCAGACGAGG
AGAAGGACCCGTTCCCGGGAGAGGCACCTGTCAAAGAGGAGACCCTGGCA
CGGTACACGAGAGGAGAAGGGAACAAAGTCAAGATGCGAGCAAAAACTGC
TGGACCAAAGCTGCAGCGGAAAACAATGGAGAAGAAGTTCCACCTGGCAG
CCAAGCAGGCAGCCAGGGCAGAGCTGTTGCTGGGCGAGGACCATGGTTAC
CTGGAAGCATCCGATGATGAAGATACAAGTCAGCTGTCTCAGACTGACAT
AGCAGATGCTGTGGATATCAGTGCAGCACAGAAGCACTTTGACCTGAAGC
TGGACAAGTTCGGTCCCTACAGGATGAACTACACACGGAATGGGCGGTTC
CTGGTCATTGGAGGCAGAAGAGGGCATGTGGCAGCCTTGGATTGGATGAG
TAAGAAGCTTCTGTGTGAGATCAATGTGATGGAGGGGGTGCATGATGTGA
AGTGGCTTCACGTGGAGACCATGTTTGCTGTGGCCCAGCAGAGGTGGACG
TACATCTACGACCATCAGGGAGTCGAACTGCACTGTCTTAAAAAGTTCAA
TAATGTTCTTAAGATGGAATTTCTCCCCTACCATTTCCTCCTTGCAACAG
CTAGCTCCACTGGTTTCCTGCAGTACTTGGATGTGTCCCTAGGGAAAGAA
TTAGTTGCCATCAATGTGAAGCAGGGCTGCTTGAATGTCATGACCCAAAA
TCCACAGACTGCTGTGGTTCACCTTGGTCATGCCAATGGTACCGTTACGC
TATGGAGTCCCAATGTCAAGGAACCACTCGCCAAGCTGTTGAGTCATGTC
ACCGCAATACGTTCCATTGCCGTAGACAAGACAGGGACCTATATGGCCAC
ATCCGGGCAGGACCGTTAC
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113802-exon-Sc0000230-1564993656:428857..429467BlTCONS00113802-exon-Sc0000230-1564993656:428857..429467Branchiostoma lanceolatumexon
BlTCONS00113802-exon-Sc0000230-1564993656:427659..428446BlTCONS00113802-exon-Sc0000230-1564993656:427659..428446Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113802BlTCONS00113802-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000230genomeSc0000230:427659..429467 -
Properties
Property NameValue
GeneIDBlCUFF055789