|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000230:424814..429430- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113800 ID=BlTCONS00113800|Name=BlTCONS00113800|organism=Branchiostoma lanceolatum|type=mRNA|length=4617bp|location=Sequence derived from alignment at Sc0000230:424814..429430- (Branchiostoma lanceolatum)
CTTCAGGTCAGAGTTCAGACAGCTGAGATGGGCAAAGGCGTGTGCGAACT
CTTCTCCCACTCCGTAACAGATCCTCTACGTTTCTTTGGTCCCTGATGTT
GCTACACTAGAGAGTTTCATCGAAAGCAGCTACTTTCGACCATCTTGTGA
ATTTCATAGCCTCTACGTACTTCAGTTAATAGTTCAGACAGGGCCGTATC
TACCACACTGTTTCGCCAACCACGTGCGCAAGTTTTGGAACATGGCTGAC
GAAGAGGACAAGTCTGGAGCTGGAGTTGGTAAGCTCAAGGGGAGTAAACA
AACAAAAAGGGCTCCGAGATACTTTGATGACAGTAGTGATGTGACGTCTA
AGGACAAACACGAGAATGAGAAGCCTTCAGAGGGGAAGTCTGAAGATAAG
AAGAAGAAATCCGGTAAGAAAAGGACGTCTGCCCCGGATGGTGACCATGC
GGACACTAAACGTGGGAAGGAGTCGTGGGACTCAGACGAGGAGAAGGACC
CGTTCCCGGGAGAGGCACCTGTCAAAGAGGAGACCCTGGCACGGTACACG
AGAGGAGAAGGGAACAAAGTCAAGGTAACTGATTTTATGTCTGAGTTTAT
GTCTGATTTTTTTTTCATTAGACACTATAGAATTTGTATAAATATTTAGA
GTAGAGTAGAGTAGATCCTTTCGGCCAGGTAGGAAGGTCATATTCCAATT
TAGGCCGCTCATCCCTTTATTGGATCATGATTCCAGGCTTGTGAGGGCAG
TCTAGTGCTTTGTAGTTGTAGACTACTGGGTGGTGTTCCATGTGTTTATC
GAGTCTGTTTTTGAAAGTGTTCACTGTTGGTGCCTCTACGACTTCTAGTA
TTTGTATATGGACCACAGAAACGTAACAAACTTGTATAGGGATGATTCAC
AAAAGATGATTGTGGTATCATGTCTATGTTATCGTAAAAGCCATGGCTGA
TGGTTTAAGTTTCTATTTTTTTTATTTCTTTCAGATGCGAGCAAAAACTG
CTGGACCAAAGCTGCAGCGGAAAACAATGGAGAAGAAGTTCCACCTGGCA
GCCAAGCAGGCAGCCAGGGCAGAGCTGTTGCTGGGCGAGGACCATGGTTA
CCTGGAAGCATCCGATGATGAAGATACAAGTCAGCTGTCTCAGACTGACA
TAGCAGATGCTGTGGATATCAGTGCAGCACAGAAGCACTTTGACCTGAAG
CTGGACAAGTTCGGTCCCTACAGGATGAACTACACACGGAATGGGCGGTT
CCTGGTCATTGGAGGCAGAAGAGGGCATGTGGCAGCCTTGGATTGGATGA
GTAAGAAGCTTCTGTGTGAGATCAATGTGATGGAGGGGGTGCATGATGTG
AAGTGGCTTCACGTGGAGACCATGTTTGCTGTGGCCCAGCAGAGGTGGAC
GTACATCTACGACCATCAGGGAGTCGAACTGCACTGTCTTAAAAAGTTCA
ATAATGTTCTTAAGATGGAATTTCTCCCCTACCATTTCCTCCTTGCAACA
GCTAGCTCCACTGGTTTCCTGCAGTACTTGGATGTGTCCCTAGGGAAAGA
ATTAGTTGCCATCAATGTGAAGCAGGGCTGCTTGAATGTCATGACCCAAA
ATCCACAGACTGCTGTGGTTCACCTTGGTCATGCCAATGGTACCGTTACG
CTATGGAGTCCCAATGTCAAGGAACCACTCGCCAAGCTGTTGAGTCATGT
CACCGCAATACGTTCCATTGCCGTAGACAAGACAGGGACCTATATGGCCA
CATCCGGGCAGGACCGTTACATGAAGGTCTTTGACATTCGTGCCATGAAA
CCGCTTCAGGTGTATCGCATGTCTGCAGGGGCTGGACAACTGGCCTTCAG
CCAGACAGGGCTGGTCGCAGCTGCACTTGGAAATGTGGTAGAGGTGTACA
AGGACTGCTGCAGCAATGTGGCAGAGAAANGACTTCTATTTGTATATGGA
CCACAGAAACGTAACGAACTTGTATTGGGATAATTCACAAAAGATGATTG
TGGTATCATGTCTATGTTATCGTAAAAGCCATGGCTGATCGTTTAAGTTT
CTATTCTTTTTATTTCTTTCAGATGCGAGCAAAAACTGCTGGACCAAAGC
TGGAGCGGAAAACAATGGAAAAGAAGTTCCACCTGGCAGCCAAGCAGGCA
GCCAGGGCAGAGCTGTTGCTGGGCGAGGACCATGGTTACCTGGAAGCATC
CGATGATGAAGATACAAGTCAGCTGTCTCAGACTGACATAGCAGATGCTG
TGGATATCAGTGCAGCACAGAAGCACTTTGACCTGAAGCTGGACAAGTTC
GGTCCCTACAGGATGAACTACACACGGAATGGGCGGTACCTGGTCATTGG
AGGCAGAAGAGGGCATGTGGCAGCCTTGGATTGGATGAGTAAGAAGCTTC
TGTGTGAGATCAATGTGATGGAGGGGGTGCATGATGTGAAGTGGCTTCAC
GTGGAGACCATGTTTGCTGTGGCCCAGCAGAGGTGGACGTACATCTACGA
CCATCAGGGAGTCGAACTGCACTGTCTTAAAAAGTTCAATAATGTTCTTA
AGATGGAATTTCTCCCCTACCATTTCCTCCTTGCAACAGCTAGCTCCACT
GGTTTCCTGCAGTACTTGGATGTGTCCCTAGGGAAAGAATTAGTTGCCAT
CAATGTGAAGCAGGGCTGCTTGAATGTCATGACCCAAAATCCACAGACTG
CTGTGGTTCACCTTGGTCATGCCAATGGTACCGTTACGCTATGGAGTCCC
AATGTCAAGGAACCACTCGCCAAGCTGTTGAGTCATGTCACCGCAATACG
TTCCATTGCCGTAGACAAGACAGGGACCTATATGGCCACATCCGGGCAGG
ACCGTTACATGAAGGTCTTTGACATTCGTGCCATGAAACCGCTTCAGGTG
TATCGCATGTCTGCAGGGGCTGGACAACTGGCCTTCAGCCAGACAGGGCT
GGTCGCAGCTGCACTTGGAAATGTGGTAGAGGTGTACAAGGACTGCTGCA
GCAATGTGGCAGAGAAACCTTACCTCACCCATCGTCTGCGCAACAACATA
AATGGTCTGCAGTTCTGTCCATACGAGGACGTTCTGGGGGTCGGCCACCG
AGACGGATTCACCAGCCTTCTCATCCCTGGTGCTGGTGAGGCAAACTTTG
ATGCCTTTGAGAACAACCCCTACCAAACGAAGAAACAACGCAGGGACTAT
GAAGTGAAGATGTTACTGGAGAAGATCCAGCCAGAGATGATCGGACTTGA
ACCAGGTGGAGTGGGACAGGTCAGTCAGCTTACAGCTCAGGAAGTGGAGA
AAAGAGAGCAGGAAGCCGTTCAGAAGAAATTCGAGCCTGCCAGGAAAAAG
AAGGGCCGCAGCAAGTCCCTAAAGACAGTACAAAGAACGAAGGGTGTAGA
GGAGGAGTGGAGAAGGATGAAAGTGAGACAGAAGATGAGGGAGGAAGAAG
AGAAACGAAAGAAACAACAGAAAGATCAAAAGAAGAAGGAAAAGTGGGGA
TCAGCTTTGGATCGTTTTCAAAGAAAAGACAACTGACTCAATAGCAAAGA
AAGTTAGTCATGAGTGCACTATCAGAACAGCACGAACAAAGTGAAAATTG
TAGTGTTGTCTCCTACTAGTAGGAACATTAAAGACAGAACAGACAGCAAA
AGAAATTTCTTGTATATATTCAATGGAGGACAGTAGCAAAGAGCTTTGTA
AACCTTGCTTTATGATCTTTGAAGTAATTCATTATCCAAATAATTCTGCA
GCTGCCATGATGATCTTAGTTTGTTGGTCTAAGTATATTTTGATATTGAA
ATCAATCATGAATGTACATTGTATTAGAATTATAATTTCATATTATGCCC
TGATATAGAAAGTCGGCAGTCAAAGTTCTTAACATATGTGGGAAATTATC
AGGTAATTTCATATTACTGTGGGCCCATTAGAATAAGTGAATACCATTTT
AGGACAGCAAGTACATATGGATGATTTTATTGCACAATGCACAGGTACTT
TTTCTTTGTAACTTCTGACGTTAATTATGTAGACAAATACTAGAATTAAT
AACAGGACTACAAATCACTTGTTCCAGACAACCTCTTTAATGCCAAGTTA
GAAACCTCCTTTCTAATTGTAATGTTTCTGGCATATTGAGTTACTGATGA
TATCTTGAGTAACGTTACTCTTAAAACAAATACGCATGTACATATACTCA
AATGTGAACAAGAATGCATCAAGTTATTGCACATAATGAGGACCCATCAA
GAATTCTATACAGACAACCCTTGTTTTGTCTTACTCCTATCCACTGCTAC
TAGGATAGATATTCCATTTAACATTGTTACCTCTATTGCGACAGCACTTT
CTGAAGACAAGGGCTTAACAACACGTATGCTAAAATTGATGCTGTGAGCT
GAGATGATCATAATGTACATGAGCATATGACATAAGCTATTTAGTACAAA
GCAATAATGGATATGTTAGTGATATACACATGTATACAATACTGGAATGA
TGTAAGACACCAAGAACTCACAATGCATTTGTTCAATGTTTAAAGTTTTC
TGTAGATAATCGCTGGAATTCTTGCCCAGCTTAACCATTTAAATATACAA
AAATGTACATACACGGC Coding sequence (CDS) from alignment at Sc0000230:424814..429430- >BlTCONS00113800 ID=BlTCONS00113800|Name=BlTCONS00113800|organism=Branchiostoma lanceolatum|type=CDS|length=1797bp|location=Sequence derived from alignment at Sc0000230:424814..429430- (Branchiostoma lanceolatum)
ATGGCTGACGAAGAGGACAAGTCTGGAGCTGGAGTTGGTAAGCTCAAGGG
GAGTAAACAAACAAAAAGGGCTCCGAGATACTTTGATGACAGTAGTGATG
TGACGTCTAAGGACAAACACGAGAATGAGAAGCCTTCAGAGGGGAAGTCT
GAAGATAAGAAGAAGAAATCCGGTAAGAAAAGGACGTCTGCCCCGGATGG
TGACCATGCGGACACTAAACGTGGGAAGGAGTCGTGGGACTCAGACGAGG
AGAAGGACCCGTTCCCGGGAGAGGCACCTGTCAAAGAGGAGACCCTGGCA
CGGTACACGAGAGGAGAAGGGAACAAAGTCAAGATGCGAGCAAAAACTGC
TGGACCAAAGCTGCAGCGGAAAACAATGGAGAAGAAGTTCCACCTGGCAG
CCAAGCAGGCAGCCAGGGCAGAGCTGTTGCTGGGCGAGGACCATGGTTAC
CTGGAAGCATCCGATGATGAAGATACAAGTCAGCTGTCTCAGACTGACAT
AGCAGATGCTGTGGATATCAGTGCAGCACAGAAGCACTTTGACCTGAAGC
TGGACAAGTTCGGTCCCTACAGGATGAACTACACACGGAATGGGCGGTAC
CTGGTCATTGGAGGCAGAAGAGGGCATGTGGCAGCCTTGGATTGGATGAG
TAAGAAGCTTCTGTGTGAGATCAATGTGATGGAGGGGGTGCATGATGTGA
AGTGGCTTCACGTGGAGACCATGTTTGCTGTGGCCCAGCAGAGGTGGACG
TACATCTACGACCATCAGGGAGTCGAACTGCACTGTCTTAAAAAGTTCAA
TAATGTTCTTAAGATGGAATTTCTCCCCTACCATTTCCTCCTTGCAACAG
CTAGCTCCACTGGTTTCCTGCAGTACTTGGATGTGTCCCTAGGGAAAGAA
TTAGTTGCCATCAATGTGAAGCAGGGCTGCTTGAATGTCATGACCCAAAA
TCCACAGACTGCTGTGGTTCACCTTGGTCATGCCAATGGTACCGTTACGC
TATGGAGTCCCAATGTCAAGGAACCACTCGCCAAGCTGTTGAGTCATGTC
ACCGCAATACGTTCCATTGCCGTAGACAAGACAGGGACCTATATGGCCAC
ATCCGGGCAGGACCGTTACATGAAGGTCTTTGACATTCGTGCCATGAAAC
CGCTTCAGGTGTATCGCATGTCTGCAGGGGCTGGACAACTGGCCTTCAGC
CAGACAGGGCTGGTCGCAGCTGCACTTGGAAATGTGGTAGAGGTGTACAA
GGACTGCTGCAGCAATGTGGCAGAGAAACCTTACCTCACCCATCGTCTGC
GCAACAACATAAATGGTCTGCAGTTCTGTCCATACGAGGACGTTCTGGGG
GTCGGCCACCGAGACGGATTCACCAGCCTTCTCATCCCTGGTGCTGGTGA
GGCAAACTTTGATGCCTTTGAGAACAACCCCTACCAAACGAAGAAACAAC
GCAGGGACTATGAAGTGAAGATGTTACTGGAGAAGATCCAGCCAGAGATG
ATCGGACTTGAACCAGGTGGAGTGGGACAGGTCAGTCAGCTTACAGCTCA
GGAAGTGGAGAAAAGAGAGCAGGAAGCCGTTCAGAAGAAATTCGAGCCTG
CCAGGAAAAAGAAGGGCCGCAGCAAGTCCCTAAAGACAGTACAAAGAACG
AAGGGTGTAGAGGAGGAGTGGAGAAGGATGAAAGTGAGACAGAAGATGAG
GGAGGAAGAAGAGAAACGAAAGAAACAACAGAAAGATCAAAAGAAGAAGG
AAAAGTGGGGATCAGCTTTGGATCGTTTTCAAAGAAAAGACAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113800-exon-Sc0000230-1564993656:428857..429430 | BlTCONS00113800-exon-Sc0000230-1564993656:428857..429430 | Branchiostoma lanceolatum | exon |
| BlTCONS00113800-exon-Sc0000230-1564993656:428372..428446 | BlTCONS00113800-exon-Sc0000230-1564993656:428372..428446 | Branchiostoma lanceolatum | exon |
| BlTCONS00113800-exon-Sc0000230-1564993656:424814..427283 | BlTCONS00113800-exon-Sc0000230-1564993656:424814..427283 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000230 | genome | Sc0000230:424814..429430 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055789 |
|
