BlTCONS00113784 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113784
Unique NameBlTCONS00113784
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000230:339241..340545-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113784 ID=BlTCONS00113784|Name=BlTCONS00113784|organism=Branchiostoma lanceolatum|type=mRNA|length=1305bp|location=Sequence derived from alignment at Sc0000230:339241..340545- (Branchiostoma lanceolatum)
GTCCAAGTCGCCTTGCTGTTAACATCCAACCCCAGGTCTCCAGGATAGCT
GACTGTACCCTGTACTTGAGTGAGTGGGGTGGATGCCTCCCTCAGAGCCC
AGCAGTCTGTAGCTGGTACACTCTGGAACCCTTCTTCAGCAGGTACCCTT
GGTTGTTAAGGGAGGCAATGAATCCCTCAAAGTCTGGAACCTTCACATCA
CAATTCTGCAGAGGAAAAGAGGTATGCTAAATGTGCCTGTACACGCATTG
ACTTATTTCTAGTGATATATTCCTACTATCTCCTCCACATTTTGCACAAG
AAAGTGTTCAGATCTAGCATGTAATGCAAGATACTGTGCTTATCATGTTT
CATCATTATCCAAGGGCTAGGCCATATCATCAGATTGCATGTATGGTAAA
GATCGGGTCTCTGATTTCGTTCATCGTTAAGTTTGTTCATGATAATGTCT
GGGTTCTATGCAGGCTCGTAGCCGTCTGGAGCTGAGGGAGACAGCTACCA
GTCAGGATGCCCAAGATGTGGAGGAAACGGTGAATCAAAGACACATTACA
ATATCTTGCTTGAACTTCATCAAAGTCCCAATACAAACCTGAGCAATCTC
CCTCATCTGTTGCACAGTAAAGATGTTGTTGTAGGTCCGTTCTGCTACTC
TATTCAGGGCAGCAACAAACCTCTTCGGCTACGGAAACATAACACCAACA
AATTACAACCATTTCAAAGTACCTGCACTTGAGATTAACTATGATTAACT
ATTAAGACTTCATAAAACTCCATGCGGTGTGAACAAAAACTTTTATCAGG
TACTGTATTAATACAAGCTGAATAACAACAGCTACAGGGTGTAATAAAAT
GTGTCATAAGTAAATCAATTGGCATACATATATATACAAAATACAGCCAG
GTATTAAACCAGTATGTACTTTGACCTGACCTTGCTCCTGCAGCTCATGC
CTGACCCATTCTGTGATCTGAGGAAATCCAGTTGTCCAAATTCATCTGAG
TACGTGTCAAACATGCTGAAGAAAAAAATGTGGTTTTGAATGGATTAAAC
AATGTTATGCAAATAGCACCCATTATTTTGTTTTGTTAATATAGCGTACA
CTGTCATCCTGGGCATGTCAATTTTGTTAAGCAATATATGCTTTTTGTAA
TGATGGTTCAGTCTACATGATTATCAATTTTTAAATACTGCATAATTATG
TTATGCCTGATGACATACACATCCATCTCATACCCTTAGCACAAATCACC
TTTGTGAAAGTCCCAGCAAGTCAAGTGATGGCCCAATCTGCATATTTCAT
TTCCG

Coding sequence (CDS) from alignment at Sc0000230:339241..340545-

>BlTCONS00113784 ID=BlTCONS00113784|Name=BlTCONS00113784|organism=Branchiostoma lanceolatum|type=CDS|length=348bp|location=Sequence derived from alignment at Sc0000230:339241..340545- (Branchiostoma lanceolatum)
CCAAGTCGCCTTGCTGTTAACATCCAACCCCAGGTCTCCAGGATAGCTGA
CTGTACCCTGTACTTGAGTGAGTGGGGTGGATGCCTCCCTCAGAGCCCAG
CAGTCTGTAGCTGGTACACTCTGGAACCCTTCTTCAGCAGGTACCCTTGG
TTGTTAAGGGAGGCAATGAATCCCTCAAAGTCTGGAACCTTCACATCACA
ATTCTGCAGAGGAAAAGAGGCTCGTAGCCGTCTGGAGCTGAGGGAGACAG
CTACCAGTCAGGATGCCCAAGATGTGGAGGAAACGGTGAATCAAAGACAC
ATTACAATATCTTGCTTGAACTTCATCAAAGTCCCAATACAAACCTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113784-exon-Sc0000230-1564993656:340325..340545BlTCONS00113784-exon-Sc0000230-1564993656:340325..340545Branchiostoma lanceolatumexon
BlTCONS00113784-exon-Sc0000230-1564993656:339241..340082BlTCONS00113784-exon-Sc0000230-1564993656:339241..340082Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113784BlTCONS00113784-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000230genomeSc0000230:339241..340545 -
Properties
Property NameValue
GeneIDBlCUFF055784