BlTCONS00113777 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113777
Unique NameBlTCONS00113777
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000230:229516..231195-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113777 ID=BlTCONS00113777|Name=BlTCONS00113777|organism=Branchiostoma lanceolatum|type=mRNA|length=1680bp|location=Sequence derived from alignment at Sc0000230:229516..231195- (Branchiostoma lanceolatum)
CATGCCCCGTCGGAACGTACGGACAGGGTTGTAGAAGTGAATGTCATTGT CAGAATGACGCCGTCTGCGATCCTATCTACGGTCGGTGCAACTGCACTGA GGGGTGGTACGGTATGAATTGCATCAAGCCATGTCCTAATGGTCTGTATG GACGGAGATGTCGGCATGTCTGTGACTGTAAGAACAATGCCACCTGTCAT CACGTGGACGGAAGCTGTAAATGCATGGCGCCCTGGACTGGGCAGTGGTG TGACGTCGTTCTATCGGACACATTTTCTTTGCCCCTTCAGATTCTCATAC CACTTTCAATATTAACACTGCTTGTCTCTGTGGTATTGTTGGCGCTTTAC AAAAGGAAGAGGACTACTCGAGTGAGACAAGACGAGAATATAGAAGAGAC ACAGGCTCTGCTCGAACTGCGTAGTATAGAAGGAGACCTGGCGCAAAGTT TGCAGCCGGGTTGGCTCAACCGATGGGAAAGGAACGTCGAAGATCTGACC CTTGATGAACTGATCGGATTAGGCACATTCGCACATGTCAGGAAAGGGCA CCTTCACACTGCTGACGTTGACACCACGGTAGCGGTCAAGTCCGTCCGAG GAGAAGACCGATTGTGCTACCGTGCCTTCTGTCGCGAAGTCGCCATACTG ATAGCCGTGCACGAACAAGGCAGGGATGCTCCTTCCAACATAACCAAATT ATTGGGTGTCATCACAAAGTCCAGACCCAAATGTATTCTCTTGGAATATG CTGCAAAGCGCGATCTATTGGGACTTTTAAAGCAACATGCTGGCTGCAAT GGTGCCCTTCCATTGGGCAGTCTGGTACGCTATGCCGTTCATGTGTCATG CGCCTTGAAAGAGCTGAGACGTCTTCGTATCGCTCACGGTGACGTGGCTG CTCGAAACGTTCTCGTCAACGAAGATGACGTCGCCAAGCTTGCTGATTTC GGTTCAGCCCATGACGTCTACACGACTACGTATGTGTCATCAGCCAAGAT GGATGTAGACGAACTCTTGCCTTTGAAGTGGATGGCTCTGGAATCTCTAG AATCTCGCGAGTTCACGTGCGAAAGCGACATGTGGTCGTTCGGTGTGCTA CTTTGGGAGATCGTCACGTACGGAGAGGAGCCCAACTATGAGCACAAGGT GCAGCTGAGCTGTCCTAAGTTAGTAGGGATCCTGAGGCGGGGGATTCGTC TGCAGAAGCCGCCCGAATGTCCGAGAAAGCTTTATGGCGTGATGCTGTCG TGTTGGCGGGAGGAGCCGTCGGCCAGACCTACACCAGAGGAACTGGAGCA GAGGCTGACAGAATGTCGACATGAAATAGACCCTTTATTTGTCGTCGAGA GGGAGACTATGCTTTAGAAAAGAACGAAGTGTTAGTGCGTAATGTTTATA TTCATTTTGTAAGTGATGTTGGATGATGGAAGGAAATGTCGTAAATTTTC ATACGTGTATTACAAATTTGTAACATGTATATGCATACATAATGAAACAC AAACATTGTAGACAGATTGCACTGATCCACAATTCGGACAACATGAGTGA TGCTTACTATTTCCAATTGACACGTGCATCACATTACAACACACGGTGAT GTAAGCGTGTCAAGTTTAAGTCGACCTGACACTGAATGATAGGGGCAGAT CAGAAAGACAGAAATTTGTACCGAAACAAT

Coding sequence (CDS) from alignment at Sc0000230:229516..231195-

>BlTCONS00113777 ID=BlTCONS00113777|Name=BlTCONS00113777|organism=Branchiostoma lanceolatum|type=CDS|length=1365bp|location=Sequence derived from alignment at Sc0000230:229516..231195- (Branchiostoma lanceolatum)
TGCCCCGTCGGAACGTACGGACAGGGTTGTAGAAGTGAATGTCATTGTCA
GAATGACGCCGTCTGCGATCCTATCTACGGTCGGTGCAACTGCACTGAGG
GGTGGTACGGTATGAATTGCATCAAGCCATGTCCTAATGGTCTGTATGGA
CGGAGATGTCGGCATGTCTGTGACTGTAAGAACAATGCCACCTGTCATCA
CGTGGACGGAAGCTGTAAATGCATGGCGCCCTGGACTGGGCAGTGGTGTG
ACGTCGTTCTATCGGACACATTTTCTTTGCCCCTTCAGATTCTCATACCA
CTTTCAATATTAACACTGCTTGTCTCTGTGGTATTGTTGGCGCTTTACAA
AAGGAAGAGGACTACTCGAGTGAGACAAGACGAGAATATAGAAGAGACAC
AGGCTCTGCTCGAACTGCGTAGTATAGAAGGAGACCTGGCGCAAAGTTTG
CAGCCGGGTTGGCTCAACCGATGGGAAAGGAACGTCGAAGATCTGACCCT
TGATGAACTGATCGGATTAGGCACATTCGCACATGTCAGGAAAGGGCACC
TTCACACTGCTGACGTTGACACCACGGTAGCGGTCAAGTCCGTCCGAGGA
GAAGACCGATTGTGCTACCGTGCCTTCTGTCGCGAAGTCGCCATACTGAT
AGCCGTGCACGAACAAGGCAGGGATGCTCCTTCCAACATAACCAAATTAT
TGGGTGTCATCACAAAGTCCAGACCCAAATGTATTCTCTTGGAATATGCT
GCAAAGCGCGATCTATTGGGACTTTTAAAGCAACATGCTGGCTGCAATGG
TGCCCTTCCATTGGGCAGTCTGGTACGCTATGCCGTTCATGTGTCATGCG
CCTTGAAAGAGCTGAGACGTCTTCGTATCGCTCACGGTGACGTGGCTGCT
CGAAACGTTCTCGTCAACGAAGATGACGTCGCCAAGCTTGCTGATTTCGG
TTCAGCCCATGACGTCTACACGACTACGTATGTGTCATCAGCCAAGATGG
ATGTAGACGAACTCTTGCCTTTGAAGTGGATGGCTCTGGAATCTCTAGAA
TCTCGCGAGTTCACGTGCGAAAGCGACATGTGGTCGTTCGGTGTGCTACT
TTGGGAGATCGTCACGTACGGAGAGGAGCCCAACTATGAGCACAAGGTGC
AGCTGAGCTGTCCTAAGTTAGTAGGGATCCTGAGGCGGGGGATTCGTCTG
CAGAAGCCGCCCGAATGTCCGAGAAAGCTTTATGGCGTGATGCTGTCGTG
TTGGCGGGAGGAGCCGTCGGCCAGACCTACACCAGAGGAACTGGAGCAGA
GGCTGACAGAATGTCGACATGAAATAGACCCTTTATTTGTCGTCGAGAGG
GAGACTATGCTTTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113777-exon-Sc0000230-1564993656:229516..231195BlTCONS00113777-exon-Sc0000230-1564993656:229516..231195Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113777BlTCONS00113777-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000230genomeSc0000230:229516..231195 -
Properties
Property NameValue
GeneIDBlCUFF055777