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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000230:222926..229370- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113776 ID=BlTCONS00113776|Name=BlTCONS00113776|organism=Branchiostoma lanceolatum|type=mRNA|length=6445bp|location=Sequence derived from alignment at Sc0000230:222926..229370- (Branchiostoma lanceolatum)
GTTTCACAGAAAATAATTAACACATGCTACAATCTCCCACCAACATGGCT
AAAACGGAGCAATAGGACAGTGTTACGGACTGCCTTCCAAACATCTACTT
GGAGATTACTGTAGCCATATCGGGCTGCTCCACTATGGCGTTGCCAAAAA
TATGTTGATTACGTCATGATCATAAGGTTCCGTAGGTGTTTGTACAAGAA
AGATGGCGCATTGGTTCCACAGGAATCCGATCAAGGCGACTGCACCTGTA
TCATTCGCCCTTGGACCAATCTGTACCAACGCACAGACCCAGAAAATATG
CAGGTTCGTATTGATACCATACTGTACGTACAATAAGTTTATGAGTGGGA
GTGAAAGACAGCCGTATAATGTTTGCTCTGCTGCCCCCCTCCCCCTTCGG
AGGCGATCAAGAATGTTGACATGACAAGCATAAAGACGTTCCTTGGTGTA
ACTTAAACATTCGTCTGCTTTTCCAAGCAAGACTTTAAAAACGACAGACA
GCTGTGTTAACTCCTCAAAATGTCGCAAAATGTTGTTTAACGAAACTTCT
AGTGTAGTTACTAAGGAACTTGCCACTGTTTACATGCATAATGACAACTA
TCAATATTCAAGACAACGATCCTTCTAGTTTTGTTTTAATGAAAGTCACC
CAAAATTCTTTGATTACAGTGACTTGCGTATGCTCCGTGCACAACTCTTG
GAACTCCTGTGTGACCCAAATAAGGACGTGACTGTTGTTAAGACGACAAC
AGACAACTATTTTGCCTTGTTGCAAGGTATGTCCAGAAAAATGATATAAT
TCTTGGGTATCAACTTGTGTTCAATTACTGTTCAAAGTCTTAGTCTCTAT
GAATACATTTTAGGTATTTTCCAGTAGAATATGCATCACTCTGATCCTTA
TGACATCAACATGCCATACGTTTGATGAAGTTGCTTATGGTTCCCCGTGA
ATTGATTTCTGAAGAAAATTTCCTTCAAGAGTTTTCTGTCATTTCTGTCC
AACTGCCTTTTTAATTCTTTTTTAAGCCTAGTAACTCAATATGGAATTTC
CTATTTTTCTATTGGCAGGGTTCCTGCAAGCCCTAGATGACAACAGTGGT
GAGAGCAAGTTGAGGCACTCAGTCAAGTTCAAGTGGTCCAGCACAGTTCT
GAGCAATGCTGTTGTGTATGTCCTCACATTACTTGTTTTTAGCTTGTTCC
CCTCTTGTCCTATAAGGCATAGGCAACATCAGTGCTGTTACCCAGGACTT
GAGAAAACTGTTCACCTGTCAACTCAATTGCAAAGACTATTAGATTGATG
TACGGTGTAATCACAGTTGTATATCTGCTGAATGTTATAAAATAGTCTGT
GCTAAGCTATGGCCAGGGCCTGATTCAGTTCAATTGTAGTTAATCTCTAC
CATACAAGAAACAGTGGTTTAAATTGTATTGTACTTGTAGATGTACAATT
ATAAAAAGTGATTGACGCAGTACAACTAGTAGTATTGACAAGCTTGCATT
AATCAACTTGTTGTTCAAAACTGTGTAGCACCCAAGCTGATGCCCTGTTT
GAGTTGGCCTCCATGGCAATGAACAGTGGACTGTGGTATATGAAACATGC
AGCCAAGATAGCTGCCAGTGATGAGTAAGTATGACAGATAGTGTTGTTTT
GCCTCAGTTCCTAAAGTCTCTTAAATGCAGGTTGGGAAAGCCAAAGGCAT
TTAAAGTCTTGTGTTCACATACTGCACATGACCCAAATGAACTCCTGCCA
TTGTATATTGAAGCCTAGGGGTCTTGAAGTATCCCTATTATTACACATAT
GCATGAAGATATTCTGAACATGAAACTTGGTAGATCTTCATTCAAGTATC
TTTCACTGACATGATCTGACCATCTATGTGTGATATCCTTTCACAGAGTG
TCTATGGATGAGGCAAAAGAAGTGCACAAGTGTCTGAGAACAGCAGCAGG
GATCTTTAAGAATGTGAAGGTAGGCTTACATTAGATTGTACTATGGTTTT
AAAAGTAGGATTATTTGCATCAGAACCTTTCCATATTAATCTCCACTTGG
TGAGTGAGAAAGATTTCCTATATTTACAGATTGTTGTAAATTTGTAGGAA
CAAGTCATTGGGAGACTTCTGGAGACAGCAGAGAAGGGCACAGACCTGGA
CCCGAAGGTGGTGGAAGCCTATTTTCAACAGTCTACTGCAGAGGCACAGG
AAGGTGGGTGAATTGAACACAGTAACATTAACTGGTTCCGAGTCTAACAG
GTTTTCTGACCACAGATATCTGCTGATGCTATTTCTAGGGAAAATCTGTT
TGTTGAAAAACTTTTTGGTAATTTTCTTGACAGGTTGTCTGAAGAGTAGA
AGTTGAAACTTTACTATTATGATTGTTATTATGTATGATAGCCAGCAGCA
AAACAGTAGATGTTGACTGTAATGTCTTACCTGATGTTGTCATGTAGTGG
CCCTGGCACGAGCTGTGGAGATGAAGCACAGTGCAGGCCTCATCTCATCA
CTGTCTTATGAGACGGCACAACTCTTCATCACTGCAGGTACACTTCACTT
GTTCAACGCTTCTATTTCAAACTGTACATTTAATATGTTATCTATTGGTT
TGGCATGAACACGTTGTATCATGAACAACCAGGGTTGCAGATAGTGTTAC
TGCAAGGGGCAAACCGGACTTGTGCAACCACATCCTTTTAATGTGTCTTA
GTGTAATGCAATACTGTAGTTTTATTTTTTTTAGTTATGGCTATCTCTGG
TTCCTTCATTGTCGATTGCATTTCATTATTCCTGACCTCTTGCCAACAGG
AGGTTCACTAGACCAACTTGATGCAGCAAGTGTTGGGAAGTGGCAGAAGT
ATCTACAACTGAAGGGTGTATTCTACTTGGCTCATGTAAGTCTACTAGTA
TTCTGCATCAATACAAGATTTACAGGTCCAGGTCTACTGGTCCATTACAA
GTATCAAAGTATATCAATGATTTTCATTTATGACCTGTCGTTGTATCTGT
AAGTGTAACACTACTAACAGTACTTGACATATTTTAGTCCATGTTTCACA
TTCCAACTATGTACTGAAGTACATATAGAAGATACTGATTGGCTTCTCAT
TTTGTTACAGTTGGGTTTATGATAAGAATAAGTTCTCAAGTGTCTGTTAT
AAATTTTCCAGGCCCACTGTTTCAATGGAGATGCACTGTTAGCAAAGGAT
AAATGTGGAGATGCAATCAGAGCCTTACAGGAAAGTGAAAAGTGTGAGTA
GACCCTTAGTCACATACTAGTATATGTAGTAACCAAATAGCAAAAGACTG
ATTTTGATATGATAGTACATGTAGTTACTTCTTAAAATATTGCAGTATCA
TTCAAGTTGTGGTTGAGTATTACTGAGGAGTATATGACTTTCCCCCAAAG
GCCAAGAAGACTAGTGGAATGGTCTGTATGTGTTAGTTTGTTACAGCCAC
CTGGACATCTACTACATGTAGTAGCCATTAAAGTATCCAGGCAGAATGCC
ATATAGTATTACACAAATGACAAACATTGCATTGTTTATGTGGAACATAC
CGTCTTTATTGCCTCTTGTAGTGTTCGAAAAAGCTGAAAGCTTATGTAAG
GAGTATGCATCTGCCAAAGGCCCAGGAACATCTGCCAGGCCAGACCAGCA
CATCTTTTTCACTAGGCTGGGGAAACAGGTGAAAATTACTCTGGACAAGT
GCACAAGGGAGAACGGCTTCATGTAAGTAATGCTCCTTTGTCAAGGTCTG
GACACAAAAACAGCTCATCCTGTTCCATCAGGCACTGTCAGACAGTACAT
GTATACTCGTAACATTACCAGTTGCCAGTTGTTTGAAAACCACATTTTCA
ACACTGTTCCAAATCTTGAGTACAATGGAAAGATACTAAGAACAACATTT
TGTACAAATGGTAGCTTCAGCAAGGCTTTTTAACCATTAATGTAAATGGA
TAGTTACTAGTTAGTGCATTTACCAACCTTATTAGCAGGAAATACAATAT
GATTGTTAAAGAAACAACTATTTGGAACTGTCTTTCTTATATATTAGAGT
TGGAACCTGTACATGTGTAGCAAATAGACAGAGATGGTACGTGATGTCAC
CACCATGTTGTTGCAAACAGCTCACCTACGGCATGATCCCTTGTCTTGTA
GATACTTCCAGAAGGTGCCTCCAGAGGTCCCAGAGTTGGAGAAGAAGGCC
ACATATGGTCTGGCCAACCCAGAGGAGTTCCAGTTACCTCCACCAAACCC
AATGTGGAGTGCGGACATCTACAATTCATTTGACCTGTCACTGGCACCTG
CTACACAAAAGGTGGGGTAGTATTCCTGACTTCTGCACAAAGTGTCCAGT
TCAGTTTCTTGATATTAATGGAATCATATTAGGCAGTATTTGAGAAAATA
AAGACTGTTTGCTGCTATTTTACAGGGTGAGAAGGAGCCGGAAGTCAAAC
CTGTGAAGGAAACAGACATCTATCAGTCGACCAAGGAACCTGGAACCTTC
AGTGGATGTGTGATCTCATAAGGTTGCCTTCCTGTCGTCTAGACTTTTAA
AAATATGTACAATAGAAGGAATGGTTTTTCAGCGGCTTGGTGTATTTCAC
ATTATCTCCATTCTTGAGTAATATGTATACTATATTTTGTATCTTGAATT
GACTGGAAATGAGATGCCTCAATATGGAATGCCTCAATAAGGGTGTCCCA
ATTTTTAGTTAGGCATTATGCATCTTTTTAATCTTGATGATCATTTGAAT
TTTTCAAACTTAAGTAATCAAAATGTTTGTTATCTTGATTGTCAATGCAT
ATTGTATATGGTCTGAACAAGAAAATTGTTTCCTTAATTAAGAAAAAAAC
TAATATCCCAACTTTTTAATGTTGATATTACATGCACTTTGTTTATCAAT
ATAACCAGTTGAGGACTCCTCATTATTCATTTGTAAAAAGGATCTTGCCT
CTAGTTGAGATCAAATTATTTTGTTCATATAAAAAAGACATAATGTAAGT
AGTGAAACTTTCAAAGTAGTGTACATGTATGTGTACAAAATGTATGTTTA
TAGACCTGTCCTGATGCAAATTGGGAGGGGGAGAAATGGTAGGGTGTCAC
TATTATGTACTGGTGTATATTTGTTCTTTTTTTCCTGACTCATCTTACTG
TTTTGCAGTAGTACTGCATGCCTTCCCTATTGCAAAAGATACCTAAGTAG
TATGCAACCTGTGAAGCAAAAGAAATGAAATAAATGCAAGACATGACAAG
TCAAGGAAAGATTTTTCAGGAATGGGAGGTTAGAGCAGTCCTCCAAGAAA
CAATTTGTCTATAATCTGATGACATGTTTTACACTTTTCTACTGAAGAAA
AAAATCCTTGCTTGAGTCACTACATAGACTTCACCTAGAACTACAATTAT
TATAACTACCTATTGTAAATATATTGTGTATATCTGCTGACATGTACTAG
TATATTAATATTACAACCTGGAGGTAGAGATAGTCTACTTAAACGAAGTT
GTGGTGGCCTTTTAGTTATGGTACAGTTGTTAAGCCAAAAGTGCAAGTCT
CAAACACGCATCTTTACAAGTCCCCAGAGGATGATAAAACTAAAGTCTGA
CAGGACTGTCCAATTGTAGAATGGAACTGATACTGATTCTTTTTCATTCA
TGGTTCCTGAACCAATTTTATTATTTGCACGGTGACCTTTTTTTTAGCTG
TAAGGAACACATGTCTGCTTGCCTACTGTTTTGAACGGGAAGAGTGTGAT
AAAAGGTGGTTTCAATATTTGACCTGTAAATACAGATAGATGACAATAGA
ACTATTGCTGTTTTTATATCTTAGACAACTATGTCTGTATATCATAATCA
AATTATGTGGTTTGGTAATTGTGATAGATAGGATTACAACTAACTTAAAC
ACAATAGCAGATCTTATCTCTCAAAACATTCAGTCATCCAAACCAACTTC
AAACACCTATTTATCATGTGGGTTAATGATATACTGTATTTTCTTTTTCT
TAATGAAAAGGAATCTTCATCCAATGTATGAACTACCCTGGCATCTAGCC
TTCCGCCGCTGAGGTTATCTTTGGCAGCCGGTAGGAGTTTTATGTGCTAG
GAGTTTATTTGGCCAGGACGGCAATAAAACTCCTACCACGTAAAACAACC
ACCGGGTGCAATTGATAACCCAGGCGGCATAGACATGTAGAACAAACCTT
GGCCGAAGATAACCCGGCTTAAGGACAAGACTGGATGCCAGGTTATGTGT
GAACTGGACAGATATGTACACTGTACATGTAACTTACATATTATATCAAT
AGGTAATGAACTTCTGTATTGCCAGGTTCACCAATAAACGTGTAATGCCC
TGTAAAATTGCCTTTCATTTGTTGGTTTCTCTATAGCTGTGTTCTACCTG
CATGCATGCCAGATGAACGGCTCCAAGTCTTTCACTCTTTGCTAA Coding sequence (CDS) from alignment at Sc0000230:222926..229370- >BlTCONS00113776 ID=BlTCONS00113776|Name=BlTCONS00113776|organism=Branchiostoma lanceolatum|type=CDS|length=1245bp|location=Sequence derived from alignment at Sc0000230:222926..229370- (Branchiostoma lanceolatum)
ATGGCGCATTGGTTCCACAGGAATCCGATCAAGGCGACTGCACCTGTATC
ATTCGCCCTTGGACCAATCTGTACCAACGCACAGACCCAGAAAATATGCA
GTGACTTGCGTATGCTCCGTGCACAACTCTTGGAACTCCTGTGTGACCCA
AATAAGGACGTGACTGTTGTTAAGACGACAACAGACAACTATTTTGCCTT
GTTGCAAGGGTTCCTGCAAGCCCTAGATGACAACAGTGGTGAGAGCAAGT
TGAGGCACTCAGTCAAGTTCAAGTGGTCCAGCACAGTTCTGAGCAATGCT
GTTGTCACCCAAGCTGATGCCCTGTTTGAGTTGGCCTCCATGGCAATGAA
CAGTGGACTGTGGTATATGAAACATGCAGCCAAGATAGCTGCCAGTGATG
AAGTGTCTATGGATGAGGCAAAAGAAGTGCACAAGTGTCTGAGAACAGCA
GCAGGGATCTTTAAGAATGTGAAGGAACAAGTCATTGGGAGACTTCTGGA
GACAGCAGAGAAGGGCACAGACCTGGACCCGAAGGTGGTGGAAGCCTATT
TTCAACAGTCTACTGCAGAGGCACAGGAAGTGGCCCTGGCACGAGCTGTG
GAGATGAAGCACAGTGCAGGCCTCATCTCATCACTGTCTTATGAGACGGC
ACAACTCTTCATCACTGCAGGAGGTTCACTAGACCAACTTGATGCAGCAA
GTGTTGGGAAGTGGCAGAAGTATCTACAACTGAAGGGTGTATTCTACTTG
GCTCATGCCCACTGTTTCAATGGAGATGCACTGTTAGCAAAGGATAAATG
TGGAGATGCAATCAGAGCCTTACAGGAAAGTGAAAAGTTGTTCGAAAAAG
CTGAAAGCTTATGTAAGGAGTATGCATCTGCCAAAGGCCCAGGAACATCT
GCCAGGCCAGACCAGCACATCTTTTTCACTAGGCTGGGGAAACAGGTGAA
AATTACTCTGGACAAGTGCACAAGGGAGAACGGCTTCATATACTTCCAGA
AGGTGCCTCCAGAGGTCCCAGAGTTGGAGAAGAAGGCCACATATGGTCTG
GCCAACCCAGAGGAGTTCCAGTTACCTCCACCAAACCCAATGTGGAGTGC
GGACATCTACAATTCATTTGACCTGTCACTGGCACCTGCTACACAAAAGG
GTGAGAAGGAGCCGGAAGTCAAACCTGTGAAGGAAACAGACATCTATCAG
TCGACCAAGGAACCTGGAACCTTCAGTGGATGTGTGATCTCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113776-exon-Sc0000230-1564993656:229068..229370 | BlTCONS00113776-exon-Sc0000230-1564993656:229068..229370 | Branchiostoma lanceolatum | exon |
| BlTCONS00113776-exon-Sc0000230-1564993656:228595..228701 | BlTCONS00113776-exon-Sc0000230-1564993656:228595..228701 | Branchiostoma lanceolatum | exon |
| BlTCONS00113776-exon-Sc0000230-1564993656:228206..228302 | BlTCONS00113776-exon-Sc0000230-1564993656:228206..228302 | Branchiostoma lanceolatum | exon |
| BlTCONS00113776-exon-Sc0000230-1564993656:227747..227842 | BlTCONS00113776-exon-Sc0000230-1564993656:227747..227842 | Branchiostoma lanceolatum | exon |
| BlTCONS00113776-exon-Sc0000230-1564993656:227402..227474 | BlTCONS00113776-exon-Sc0000230-1564993656:227402..227474 | Branchiostoma lanceolatum | exon |
| BlTCONS00113776-exon-Sc0000230-1564993656:227168..227273 | BlTCONS00113776-exon-Sc0000230-1564993656:227168..227273 | Branchiostoma lanceolatum | exon |
| BlTCONS00113776-exon-Sc0000230-1564993656:226834..226923 | BlTCONS00113776-exon-Sc0000230-1564993656:226834..226923 | Branchiostoma lanceolatum | exon |
| BlTCONS00113776-exon-Sc0000230-1564993656:226486..226571 | BlTCONS00113776-exon-Sc0000230-1564993656:226486..226571 | Branchiostoma lanceolatum | exon |
| BlTCONS00113776-exon-Sc0000230-1564993656:226128..226209 | BlTCONS00113776-exon-Sc0000230-1564993656:226128..226209 | Branchiostoma lanceolatum | exon |
| BlTCONS00113776-exon-Sc0000230-1564993656:225649..225799 | BlTCONS00113776-exon-Sc0000230-1564993656:225649..225799 | Branchiostoma lanceolatum | exon |
| BlTCONS00113776-exon-Sc0000230-1564993656:225060..225219 | BlTCONS00113776-exon-Sc0000230-1564993656:225060..225219 | Branchiostoma lanceolatum | exon |
| BlTCONS00113776-exon-Sc0000230-1564993656:222926..224945 | BlTCONS00113776-exon-Sc0000230-1564993656:222926..224945 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000230 | genome | Sc0000230:222926..229370 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055776 |
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