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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000230:222926..229182- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113775 ID=BlTCONS00113775|Name=BlTCONS00113775|organism=Branchiostoma lanceolatum|type=mRNA|length=6257bp|location=Sequence derived from alignment at Sc0000230:222926..229182- (Branchiostoma lanceolatum)
TTTGTACAAGAAAGATGGCGCATTGGTTCCACAGGAATCCGATCAAGGCG
ACTGCACCTGTATCATTCGCCCTTGGACCAATCTGTACCAACGCACAGAC
CCAGAAAATATGCAGGTTCGTATTGATACCATACTGTACGTACAATAAGT
TTATGAGTGGGAGTGAAAGACAGCCGTATAATGTTTGCTCTGCTGCCCCC
CTCCCCCTTCGGAGGCGATCAAGAATGTTGACATGACAAGCATAAAGACG
TTCCTTGGTGTAACTTAAACATTCGTCTGCTTTTCCAAGCAAGACTTTAA
AAACGACAGACAGCTGTGTTAACTCCTCAAAATGTCGCAAAATGTTGTTT
AACGAAACTTCTAGTGTAGTTACTAAGGAACTTGCCACTGTTTACATGCA
TAATGACAACTATCAATATTCAAGACAACGATCCTTCTAGTTTTGTTTTA
ATGAAAGTCACCCAAAATTCTTTGATTACAGTGACTTGCGTATGCTCCGT
GCACAACTCTTGGAACTCCTGTGTGACCCAAATAAGGACGTGACTGTTGT
TAAGACGACAACAGACAACTATTTTGCCTTGTTGCAAGGTATGTCCAGAA
AAATGATATAATTCTTGGGTATCAACTTGTGTTCAATTACTGTTCAAAGT
CTTAGTCTCTATGAATACATTTTAGGTATTTTCCAGTAGAATATGCATCA
CTCTGATCCTTATGACATCAACATGCCATACGTTTGATGAAGTTGCTTAT
GGTTCCCCGTGAATTGATTTCTGAAGAAAATTTCCTTCAAGAGTTTTCTG
TCATTTCTGTCCAACTGCCTTTTTAATTCTTTTTTAAGCCTAGTAACTCA
ATATGGAATTTCCTATTTTTCTATTGGCAGGGTTCCTGCAAGCCCTAGAT
GACAACAGTGGTGAGAGCAAGTTGAGGCACTCAGTCAAGTTCAAGTGGTC
CAGCACAGTTCTGAGCAATGCTGTTGTGTATGTCCTCACATTACTTGTTT
TTAGCTTGTTCCCCTCTTGTCCTATAAGGCATAGGCAACATCAGTGCTGT
TACCCAGGACTTGAGAAAACTGTTCACCTGTCAACTCAATTGCAAAGACT
ATTAGATTGATGTACGGTGTAATCACAGTTGTATATCTGCTGAATGTTAT
AAAATAGTCTGTGCTAAGCTATGGCCAGGGCCTGATTCAGTTCAATTGTA
GTTAATCTCTACCATACAAGAAACAGTGGTTTAAATTGTATTGTACTTGT
AGATGTACAATTATAAAAAGTGATTGACGCAGTACAACTAGTAGTATTGA
CAAGCTTGCATTAATCAACTTGTTGTTCAAAACTGTGTAGCACCCAAGCT
GATGCCCTGTTTGAGTTGGCCTCCATGGCAATGAACAGTGGACTGTGGTA
TATGAAACATGCAGCCAAGATAGCTGCCAGTGATGAGTAAGTATGACAGA
TAGTGTTGTTTTGCCTCAGTTCCTAAAGTCTCTTAAATGCAGGTTGGGAA
AGCCAAAGGCATTTAAAGTCTTGTGTTCACATACTGCACATGACCCAAAT
GAACTCCTGCCATTGTATATTGAAGCCTAGGGGTCTTGAAGTATCCCTAT
TATTACACATATGCATGAAGATATTCTGAACATGAAACTTGGTAGATCTT
CATTCAAGTATCTTTCACTGACATGATCTGACCATCTATGTGTGATATCC
TTTCACAGAGTGTCTATGGATGAGGCAAAAGAAGTGCACAAGTGTCTGAG
AACAGCAGCAGGGATCTTTAAGAATGTGAAGGTAGGCTTACATTAGATTG
TACTATGGTTTTAAAAGTAGGATTATTTGCATCAGAACCTTTCCATATTA
ATCTCCACTTGGTGAGTGAGAAAGATTTCCTATATTTACAGATTGTTGTA
AATTTGTAGGAACAAGTCATTGGGAGACTTCTGGAGACAGCAGAGAAGGG
CACAGACCTGGACCCGAAGGTGGTGGAAGCCTATTTTCAACAGTCTACTG
CAGAGGCACAGGAAGGTGGGTGAATTGAACACAGTAACATTAACTGGTTC
CGAGTCTAACAGGTTTTCTGACCACAGATATCTGCTGATGCTATTTCTAG
GGAAAATCTGTTTGTTGAAAAACTTTTTGGTAATTTTCTTGACAGGTTGT
CTGAAGAGTAGAAGTTGAAACTTTACTATTATGATTGTTATTATGTATGA
TAGCCAGCAGCAAAACAGTAGATGTTGACTGTAATGTCTTACCTGATGTT
GTCATGTAGTGGCCCTGGCACGAGCTGTGGAGATGAAGCACAGTGCAGGC
CTCATCTCATCACTGTCTTATGAGACGGCACAACTCTTCATCACTGCAGG
TACACTTCACTTGTTCAACGCTTCTATTTCAAACTGTACATTTAATATGT
TATCTATTGGTTTGGCATGAACACGTTGTATCATGAACAACCAGGGTTGC
AGATAGTGTTACTGCAAGGGGCAAACCGGACTTGTGCAACCACATCCTTT
TAATGTGTCTTAGTGTAATGCAATACTGTAGTTTTATTTTTTTTAGTTAT
GGCTATCTCTGGTTCCTTCATTGTCGATTGCATTTCATTATTCCTGACCT
CTTGCCAACAGGAGGTTCACTAGACCAACTTGATGCAGCAAGTGTTGGGA
AGTGGCAGAAGTATCTACAACTGAAGGGTGTATTCTACTTGGCTCATGTA
AGTCTACTAGTATTCTGCATCAATACAAGATTTACAGGTCCAGGTCTACT
GGTCCATTACAAGTATCAAAGTATATCAATGATTTTCATTTATGACCTGT
CGTTGTATCTGTAAGTGTAACACTACTAACAGTACTTGACATATTTTAGT
CCATGTTTCACATTCCAACTATGTACTGAAGTACATATAGAAGATACTGA
TTGGCTTCTCATTTTGTTACAGTTGGGTTTATGATAAGAATAAGTTCTCA
AGTGTCTGTTATAAATTTTCCAGGCCCACTGTTTCAATGGAGATGCACTG
TTAGCAAAGGATAAATGTGGAGATGCAATCAGAGCCTTACAGGAAAGTGA
AAAGTGTGAGTAGACCCTTAGTCACATACTAGTATATGTAGTAACCAAAT
AGCAAAAGACTGATTTTGATATGATAGTACATGTAGTTACTTCTTAAAAT
ATTGCAGTATCATTCAAGTTGTGGTTGAGTATTACTGAGGAGTATATGAC
TTTCCCCCAAAGGCCAAGAAGACTAGTGGAATGGTCTGTATGTGTTAGTT
TGTTACAGCCACCTGGACATCTACTACATGTAGTAGCCATTAAAGTATCC
AGGCAGAATGCCATATAGTATTACACAAATGACAAACATTGCATTGTTTA
TGTGGAACATACCGTCTTTATTGCCTCTTGTAGTGTTCGAAAAAGCTGAA
AGCTTATGTAAGGAGTATGCATCTGCCAAAGGCCCAGGAACATCTGCCAG
GCCAGACCAGCACATCTTTTTCACTAGGCTGGGGAAACAGGTGAAAATTA
CTCTGGACAAGTGCACAAGGGAGAACGGCTTCATGTAAGTAATGCTCCTT
TGTCAAGGTCTGGACACAAAAACAGCTCATCCTGTTCCATCAGGCACTGT
CAGACAGTACATGTATACTCGTAACATTACCAGTTGCCAGTTGTTTGAAA
ACCACATTTTCAACACTGTTCCAAATCTTGAGTACAATGGAAAGATACTA
AGAACAACATTTTGTACAAATGGTAGCTTCAGCAAGGCTTTTTAACCATT
AATGTAAATGGATAGTTACTAGTTAGTGCATTTACCAACCTTATTAGCAG
GAAATACAATATGATTGTTAAAGAAACAACTATTTGGAACTGTCTTTCTT
ATATATTAGAGTTGGAACCTGTACATGTGTAGCAAATAGACAGAGATGGT
ACGTGATGTCACCACCATGTTGTTGCAAACAGCTCACCTACGGCATGATC
CCTTGTCTTGTAGATACTTCCAGAAGGTGCCTCCAGAGGTCCCAGAGTTG
GAGAAGAAGGCCACATATGGTCTGGCCAACCCAGAGGAGTTCCAGTTACC
TCCACCAAACCCAATGTGGAGTGCGGACATCTACAATTCATTTGACCTGT
CACTGGCACCTGCTACACAAAAGGTGGGGTAGTATTCCTGACTTCTGCAC
AAAGTGTCCAGTTCAGTTTCTTGATATTAATGGAATCATATTAGGCAGTA
TTTGAGAAAATAAAGACTGTTTGCTGCTATTTTACAGGGTGAGAAGGAGC
CGGAAGTCAAACCTGTGAAGGAAACAGACATCTATCAGTCGACCAAGGAA
CCTGGAACCTTCAGTGGATGTGTGATCTCATAAGGTTGCCTTCCTGTCGT
CTAGACTTTTAAAAATATGTACAATAGAAGGAATGGTTTTTCAGCGGCTT
GGTGTATTTCACATTATCTCCATTCTTGAGTAATATGTATACTATATTTT
GTATCTTGAATTGACTGGAAATGAGATGCCTCAATATGGAATGCCTCAAT
AAGGGTGTCCCAATTTTTAGTTAGGCATTATGCATCTTTTTAATCTTGAT
GATCATTTGAATTTTTCAAACTTAAGTAATCAAAATGTTTGTTATCTTGA
TTGTCAATGCATATTGTATATGGTCTGAACAAGAAAATTGTTTCCTTAAT
TAAGAAAAAAACTAATATCCCAACTTTTTAATGTTGATATTACATGCACT
TTGTTTATCAATATAACCAGTTGAGGACTCCTCATTATTCATTTGTAAAA
AGGATCTTGCCTCTAGTTGAGATCAAATTATTTTGTTCATATAAAAAAGA
CATAATGTAAGTAGTGAAACTTTCAAAGTAGTGTACATGTATGTGTACAA
AATGTATGTTTATAGACCTGTCCTGATGCAAATTGGGAGGGGGAGAAATG
GTAGGGTGTCACTATTATGTACTGGTGTATATTTGTTCTTTTTTTCCTGA
CTCATCTTACTGTTTTGCAGTAGTACTGCATGCCTTCCCTATTGCAAAAG
ATACCTAAGTAGTATGCAACCTGTGAAGCAAAAGAAATGAAATAAATGCA
AGACATGACAAGTCAAGGAAAGATTTTTCAGGAATGGGAGGTTAGAGCAG
TCCTCCAAGAAACAATTTGTCTATAATCTGATGACATGTTTTACACTTTT
CTACTGAAGAAAAAAATCCTTGCTTGAGTCACTACATAGACTTCACCTAG
AACTACAATTATTATAACTACCTATTGTAAATATATTGTGTATATCTGCT
GACATGTACTAGTATATTAATATTACAACCTGGAGGTAGAGATAGTCTAC
TTAAACGAAGTTGTGGTGGCCTTTTAGTTATGGTACAGTTGTTAAGCCAA
AAGTGCAAGTCTCAAACACGCATCTTTACAAGTCCCCAGAGGATGATAAA
ACTAAAGTCTGACAGGACTGTCCAATTGTAGAATGGAACTGATACTGATT
CTTTTTCATTCATGGTTCCTGAACCAATTTTATTATTTGCACGGTGACCT
TTTTTTTAGCTGTAAGGAACACATGTCTGCTTGCCTACTGTTTTGAACGG
GAAGAGTGTGATAAAAGGTGGTTTCAATATTTGACCTGTAAATACAGATA
GATGACAATAGAACTATTGCTGTTTTTATATCTTAGACAACTATGTCTGT
ATATCATAATCAAATTATGTGGTTTGGTAATTGTGATAGATAGGATTACA
ACTAACTTAAACACAATAGCAGATCTTATCTCTCAAAACATTCAGTCATC
CAAACCAACTTCAAACACCTATTTATCATGTGGGTTAATGATATACTGTA
TTTTCTTTTTCTTAATGAAAAGGAATCTTCATCCAATGTATGAACTACCC
TGGCATCTAGCCTTCCGCCGCTGAGGTTATCTTTGGCAGCCGGTAGGAGT
TTTATGTGCTAGGAGTTTATTTGGCCAGGACGGCAATAAAACTCCTACCA
CGTAAAACAACCACCGGGTGCAATTGATAACCCAGGCGGCATAGACATGT
AGAACAAACCTTGGCCGAAGATAACCCGGCTTAAGGACAAGACTGGATGC
CAGGTTATGTGTGAACTGGACAGATATGTACACTGTACATGTAACTTACA
TATTATATCAATAGGTAATGAACTTCTGTATTGCCAGGTTCACCAATAAA
CGTGTAATGCCCTGTAAAATTGCCTTTCATTTGTTGGTTTCTCTATAGCT
GTGTTCTACCTGCATGCATGCCAGATGAACGGCTCCAAGTCTTTCACTCT
TTGCTAA Coding sequence (CDS) from alignment at Sc0000230:222926..229182- >BlTCONS00113775 ID=BlTCONS00113775|Name=BlTCONS00113775|organism=Branchiostoma lanceolatum|type=CDS|length=1152bp|location=Sequence derived from alignment at Sc0000230:222926..229182- (Branchiostoma lanceolatum)
TTTGTACAAGAAAGATGGCGCATTGGTTCCACAGGAATCCGATCAAGGCG
ACTGCACCTGTATCATTCGCCCTTGGACCAATCTGTACCAACGCACAGAC
CCAGAAAATATGCAGGGTTCCTGCAAGCCCTAGATGACAACAGTGGTGAG
AGCAAGTTGAGGCACTCAGTCAAGTTCAAGTGGTCCAGCACAGTTCTGAG
CAATGCTGTTGTCACCCAAGCTGATGCCCTGTTTGAGTTGGCCTCCATGG
CAATGAACAGTGGACTGTGGTATATGAAACATGCAGCCAAGATAGCTGCC
AGTGATGAAGTGTCTATGGATGAGGCAAAAGAAGTGCACAAGTGTCTGAG
AACAGCAGCAGGGATCTTTAAGAATGTGAAGGAACAAGTCATTGGGAGAC
TTCTGGAGACAGCAGAGAAGGGCACAGACCTGGACCCGAAGGTGGTGGAA
GCCTATTTTCAACAGTCTACTGCAGAGGCACAGGAAGTGGCCCTGGCACG
AGCTGTGGAGATGAAGCACAGTGCAGGCCTCATCTCATCACTGTCTTATG
AGACGGCACAACTCTTCATCACTGCAGGAGGTTCACTAGACCAACTTGAT
GCAGCAAGTGTTGGGAAGTGGCAGAAGTATCTACAACTGAAGGGTGTATT
CTACTTGGCTCATGCCCACTGTTTCAATGGAGATGCACTGTTAGCAAAGG
ATAAATGTGGAGATGCAATCAGAGCCTTACAGGAAAGTGAAAAGTTGTTC
GAAAAAGCTGAAAGCTTATGTAAGGAGTATGCATCTGCCAAAGGCCCAGG
AACATCTGCCAGGCCAGACCAGCACATCTTTTTCACTAGGCTGGGGAAAC
AGGTGAAAATTACTCTGGACAAGTGCACAAGGGAGAACGGCTTCATATAC
TTCCAGAAGGTGCCTCCAGAGGTCCCAGAGTTGGAGAAGAAGGCCACATA
TGGTCTGGCCAACCCAGAGGAGTTCCAGTTACCTCCACCAAACCCAATGT
GGAGTGCGGACATCTACAATTCATTTGACCTGTCACTGGCACCTGCTACA
CAAAAGGGTGAGAAGGAGCCGGAAGTCAAACCTGTGAAGGAAACAGACAT
CTATCAGTCGACCAAGGAACCTGGAACCTTCAGTGGATGTGTGATCTCAT
AA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113775-exon-Sc0000230-1564993656:229068..229182 | BlTCONS00113775-exon-Sc0000230-1564993656:229068..229182 | Branchiostoma lanceolatum | exon |
| BlTCONS00113775-exon-Sc0000230-1564993656:228206..228302 | BlTCONS00113775-exon-Sc0000230-1564993656:228206..228302 | Branchiostoma lanceolatum | exon |
| BlTCONS00113775-exon-Sc0000230-1564993656:227747..227842 | BlTCONS00113775-exon-Sc0000230-1564993656:227747..227842 | Branchiostoma lanceolatum | exon |
| BlTCONS00113775-exon-Sc0000230-1564993656:227402..227474 | BlTCONS00113775-exon-Sc0000230-1564993656:227402..227474 | Branchiostoma lanceolatum | exon |
| BlTCONS00113775-exon-Sc0000230-1564993656:227168..227273 | BlTCONS00113775-exon-Sc0000230-1564993656:227168..227273 | Branchiostoma lanceolatum | exon |
| BlTCONS00113775-exon-Sc0000230-1564993656:226834..226923 | BlTCONS00113775-exon-Sc0000230-1564993656:226834..226923 | Branchiostoma lanceolatum | exon |
| BlTCONS00113775-exon-Sc0000230-1564993656:226486..226571 | BlTCONS00113775-exon-Sc0000230-1564993656:226486..226571 | Branchiostoma lanceolatum | exon |
| BlTCONS00113775-exon-Sc0000230-1564993656:226128..226209 | BlTCONS00113775-exon-Sc0000230-1564993656:226128..226209 | Branchiostoma lanceolatum | exon |
| BlTCONS00113775-exon-Sc0000230-1564993656:225649..225799 | BlTCONS00113775-exon-Sc0000230-1564993656:225649..225799 | Branchiostoma lanceolatum | exon |
| BlTCONS00113775-exon-Sc0000230-1564993656:225060..225219 | BlTCONS00113775-exon-Sc0000230-1564993656:225060..225219 | Branchiostoma lanceolatum | exon |
| BlTCONS00113775-exon-Sc0000230-1564993656:222926..224945 | BlTCONS00113775-exon-Sc0000230-1564993656:222926..224945 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000230 | genome | Sc0000230:222926..229182 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055776 |
|
