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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000230:38743..46936- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113737 ID=BlTCONS00113737|Name=BlTCONS00113737|organism=Branchiostoma lanceolatum|type=mRNA|length=8194bp|location=Sequence derived from alignment at Sc0000230:38743..46936- (Branchiostoma lanceolatum) TCTTCGTCGAAAATGCGTTTCTCTTCCGAGAAAAGGTGGGCAAAGGTACA
TAAACATGAGTTCAGTGAATATAAAGGAGTTGAGAAGCTGGTCGGGAGCT
CGAGCGCCTGTCGACAACATACATGACATACGTGTAAAGGCTAGGGTTTG
CCCAGGAACGCACAGTGTTGGTGAGTTCCTACCACAGTGTGGAAACCTGT
TCTCACACAGCACGACCAGCGGATATCGGCGGACTACATTCACAAGGTTA
GACTTGTGTGAACGAATTCGGGACACATTTACAGAATACGCACGCCCTTT
ATTTTAAGTTTTATAGGAATATATTTCATGGCTTATTTTATTTTCCGGCC
ACCTATTGTGTGTGTACTAATGCCACGGTCGCAAACGTCGTAGGTCACCG
AACGATTGTGTCAAGGGAGGGTTCGTGGGTCAGCCGCACGATAATCGCAG
GTGAAATAAGCTATCGCTGAGCGTCGTGCGTGATCTTCTTCCATCGTCGT
ACGATTTCTCTAGACACATTCATGCTGTACAGTGTACATCTTTTAGTTTT
ATCTGTCGGGCCCTAGGAGCTACTGTTATGTTCCAGTATCCCAGCTGGCC
TGCTATTTGCTATTTTTCTTGGTGGGGACTTTCTGGGGGCCATCACAAGC
AAAATATCCCAGCTCTTGGCAAACTGACCACAGAGACAGTGATGAGGTCT
GATCTAGTTGTGTACCTACGACATTCCTACGTGGATATAGCCGTGTAACA
ATTGTATGCATCACATGCACGTGATTCTGGATCTGACAACGGGCGAGCTG
TTCTCTGGTTGCTACTGTGTTCTCAAAATGGCTACATTTTTCAACTGTCA
ATATCAAGGAAAATCAAAATCGCCAGAACGCGGTCTAATTTGTCACCTCA
TAAAGAAAAAGAAGGCAATCACTGTGTATCCTGCCATGGGCGCTGCCATG
GGGGCTACAAAAGTTGAACGACGATGACAACATTTTGAACATATTCAAAA
CCCCTTTCCAGCCGGCACGCCATGGGCTTCACAGAACACGAATCGAACAG
TTTTTCTATGCAGTTCGAATCGATCCGCGGTCCTTAGCAACGCGTTGCTA
AGGAATCTCTCGCTGCAGAGCAGAGAGATGAAATTTCATCCGACTTTGAC
AGCCCCGTGGAGCCTGTTTGGCGGCCTTTTTATGAATGTTGCGTTATGTG
TACCAGACGGGAATACCATGTGGCCTCGATTTCATTCATTTTCTAAGGGT
TTTACAACGATTCTAGTTAGGTTCGTGCTCATATACGTTATATAGTGAAA
TCATGAACATGTCGGTGCCGTACTGAGCTACATTTTTGACAAATTTGAAT
TTCGGGGGAATTGCATTACGCCCTCGATTTTATTTTCAGTGACCAGTACG
TCAGAATCTTTCAATCTTCTAGTTTAACTCTTCTAAAATTCTTGTTGGTT
TGAAATTTGGACAGGTTTGTAATTTCACTTCTATTGAGGTCACATTCTCA
ACTGTTTTACACCAAAAATGTTGCAAGGCGTCGGTGTAGTTGATTTGAGT
GCAGTCGACTTTTGGCAAAAGTTGCGGTACCGAAATGCCTGTCCAGTATT
GTCAAAGGAAGACTACAGCAACTTAATGCGTGAAGACGGGCTGAATTCGC
AAAGGCTATCTTAGTTTTAAGGTTACTGGTACATAAACATAGCGGCGCGG
GTCTGGCGCGCGCGCTCTGGAACGGGCATGGGCGCCGGGGCTGACGCGTT
CTTTTTTAGAATCAAAACGACGCCTATGATAAAGTGGCATCGCGCGATTT
AGCAGGAAGCCCATTTCGCACTCGAAATTGATAATAAATTATATACCACC
TAAAAGTACAGATTTTGATTTATTCTACGCAGTACATTTCTTTTTGTTTT
AAAATCGAAAATAGCGTAAAAACTCGAGGGGGATTTGCTCTAAAATCAAC
TGATTTCAGGTCATACCATCAGAAGGGTACAGGTAAAAAATCGGTTCAAA
AACTCTATATTAGTGAAATAGAAAACTTGAAAATTATAGATGCGATGAAA
TATTGAATATACATAGTTGTAAACTTAAGCAACAAGCTTTGTTGTAGGTA
GTCCCGAAGCCCGGGGGTCATGGAACGTACAACTGGCTCAAAAAGCCGCG
CGGTTCGGCATGGTACTTAATCAGAAATTTTGAACTTAGATTTATGTGAC
TTTGGGCTGGTATATTTACTTAAAACTCGGAATTCATAAACGGGGGACCC
CCTAAAACATAATTCTTGTCATAAATTTAAGACTTGTGGAACGATGATCT
GTCCATAGTAGATAATTACAAAAAAGGTCGAACCGGGCGCGTTCTATTCT
GGAATCAAAATGATGACATGACCATGTGCGATTTCGGGGGAAATGCATTA
CGCCCTCGAAATCTATCACAAGTCATATACCACCAGAAACTAGAAAGATT
TCTCTTTTTCACGCAGTACATTTCCTGTTGGTTTGAAGTATACAACTGGA
TAAAAATAAGGGGAGAAAATACACGAAAATAACCTAATTTCGGGGCGTAT
TGCTGACAAGAAAGTAATAAAATATCGGTTTAGAAATCTATAGGAGTAGA
AAACAAAGCTAAAATAGTGTAATTAACTTCAAATCAAAATGATATACGGT
GATATACTCCCGCAACAAGCTTTCTTGTAAGGGGTGTTGACGCCCGGAGT
GATGGAACGGACTACTTTCTCTCGCGGAAGGAAAAGAAAACTGCATAGAA
CTCTCGGCATGGCGTGCCGGCTGTTTCAGCTGTATTTTCCGTCGTACGAC
GCTCGGCGATCGCTAAACTGGCAATTTACCTGCGAGTGACCCAAGTGAAC
TTGTGACTACGAAATAGTTGTCATGTGTAGTTCATTTGTTTATCCTCCAT
AGCCATGGGTTCTAAGAGAGTGGCCATTATTGGAGCCGGAGTGAGCGGAC
TCACGTCAATCAAAGCTTGTCTGGAGGAGGGGCTGCAGCCTGTTTGTTTC
GAGCAACATGAGGATCTCGGTAAGAACCAGACATTACAAGTCTTAGATAT
TCATTTCAATAGCGTTCAAGAACAGAAGTAGCTAATTCCATTTAATGATG
ACAGACAATAAACATGCACCGTGGAATAGAATAGTGAAGCAGCAGTACTG
ACTGTCCTTGAAGCATAAAAGAGATGAAGACAGAAGGGAAGGATGAAAGA
TTGTAAGTAATCCATGTGAACATGCGTGAGCGTATGTGGCTGTTGGGGTA
TGGTAAATCATGCTAAACCTGTTGAAAAATCCCTATCATTTGTAAAGTCA
ATAGGCTACCTGCTGCCATGCTGCTATCTTACTTATGATAACATGACTGT
AGTCCCTAGAGGTACTTTGCATAGTAATGATATGTATACACAGAAGGGCA
TAGACATGTCTTAGACTGGAGGTGAATCTAATTTGTTCCCTTGACTTCTA
CCTGCTGTGTGCTACTGCAAATAATCTCGATGCAAACTGCAATTCCAGGC
GGCGTGTGGTACTACTCTGACGATGTCAGGCCCAACCAGGGGGCCGCCAT
GTACCGCTCTCTCATCACAAACTCCAGTAAAGAAATGATGTCATTCAGCG
ACTTCCCCTTTCCCAAGGACACGCCCCCCTACCTGCCGTACCACCGTGTG
CACACATATCTACAGGACTACGCTCAGCACTTCGACCTGAAGAAACACAT
CCGATTCGGCACACAGGTGGGGATATTCTTGTTGAACCATTGATTCTATA
ACATCTGTACTAAGATCTTTGTTTTGATGTCCTTCTTTCTTACGTTCAAC
GCTGTCTATCACTCCAGGTCAGTCGCATAGAGAAGACAGAAGACTTTGAT
GAGACTGGCCGGTGGGAGGTCCGTACTGTACAGACGGGTCACAGCGATGG
GGAACAGACAGAGATTTTTGACGCCATCATGGTACGTGCTAAGCGCCGCC
ATAGAAACAGAAATGTTAAACACAGCAATGACTGATGATCTCCGATAAGA
GTGAAGCGTAATAGACCCAGCCGTCCACTTACGCCATCTTCTACATGAGG
CTGAGGATGTGATGGTCCACCGTTCTTTGTAGCCTTGTATACAAACCTAC
TATAGCTCCCGAGTCTCCTCTCCGGAGAGGAGACTCGGAAGCTATAGTTT
GGATACCAGGCTACGTTATTTGGCCCTTCCATACTAAGTAAACGTCTCTC
AACTTTGTCTCACTACTTTACTTCCTCCCTAGGTGTGTAACGGCGTGTTC
GCCCGGCCGTACGTTCCAGACGTGCCTGGTCTGTCGGACTTTGCAGGTGT
CACCATGCACAGTCAGGAGTACCGGACTGCCCAACAGTTCACGGGGAAGA
AGGTGGTTGTTGTAGGTAGGTCAGCTATTACCTTCCACTTACACACCCAG
GTTAAGTCATTCTTGTCTATACGTTTATCCCTACTACCCACATGACTTCA
AATAACCTTCTTCATCCGCGATTCTGTCTCCAGGGGCGGGAAACTCTGCA
GGCGACGTGGCGGCGGAGATCGCTCAGGTGGCGTCACAGGTGAGATTTTA
TGACAACTGTTGTCCTGTCGTCTCCTTCGATTCCTACGTTTTCTCTTCTC
TGCCAAACCGACAAATATTCATTATCCTAAAGGGACATACATGTTTACAT
TGTAAACTGTTTGTATCAGTACTGAGAACACACGAAAGCTCCGTTAGTCC
ATCCTTCCCTTCTCTATAGACGTAACGTTACACTGCTCACNAAATGGACA
TACATGTTTACATTGTTCTCTGTTTGTATCAGTACTGAGAACACACGAAG
GCCCCGTTAGTCCATCCTTCCCTTCTCTAAAGACGTAACATTACACTGCT
GACTGTTGACCACACTGACAACCCCATCCCGTTCCCAGGTATACCTGAGT
CTGAGGGACGGTGCCTGGGTGCTTCCCCGGCTGGCTCAGGCCGGGGTGCC
GCGGGACATGATGCTGCGCCGGGTACTTATGGGCATGCCCGAGGTCATCG
TCAACAAAATCATCAAGGGCGAGGCGAACGCCAGAGTGTGTCATGACAAC
TACGGGCTGACGTGTCCGGCGGACCCGCTCAAACACTCCGTCATGGCGAA
TGACGAGATAGGTTTCAGACTGGCCNAGATAGGTTACAGACTGGCCACTG
GGCAGGTACGTTTATACAATAGTGTTTATCAATCTGATATATAACTGTTA
ATTGTGTTTGTTTAATGATAGACATGCAATATGTTTGGCGTTATTTCTGA
TGAGGTGATTAATGTATCTGTGGGGTACATGTGTATCTCGTCGTTTATCT
TGGCGGCAAATACTACTCATTTCTAAAGTCATGTCTGATCTGATGTGCTT
CATATCTAATCTGATATGTACATGTAACCGTGACTGTCTGTCCTTAACAG
GTCCTCACGAAGCCCCAGCTCTCCCGGTTCACCCAGCACGCTGCCCGGTT
CGCGGACGGCAGTACAGTGGACGGGCTAGACGCCGTGGTATTCGCCACTG
GATTCAACCTGGCCTTTAACTTCAGTGACAAGTCCATCCTTAATAGTAAG
TCCTAGCCCTATGCAGGGTTTTCAGTCCGTCACCTACACCGCAGTTGAAA
GCAAACTTAAGCTTATGTGGACTTTGATAGAGTTATCAGAAATGTTTGTT
TTCCTCTATAAAGCTGATAAGACTCACGTGGTGATTGCAAATCTGTCTGT
AGTGTATCTTTCCTTCACTTCATTTGTGTTTTAAATCAATGGAATATGGT
ACATGTATTTGAAAGCTCAAAGTGTCAAAGGTGTTCTTGTACCTGCAGCT
CAGAAGTACATTGCAAGATTAGAAACTTCGTTCATCCTATTCTTCCTCAG
ATAACGCGGAGGACCTGAACTTGTACAAGTTGGTGTTCCCTGCGGAGCTT
ACAAAACCCACCCTGTCTGTGATCGGCTGCCTGTCTACCATCGGGGCACA
TCCTCCTATCTACGAACTACAGGCTCGCTGGGCCGTCAGGGTGTTCTTGG
TAAGTAGAACGTTTCAGTCATTCCGCCCTACGGGCATTCTTGTCAAGTTG
TTTGGATAGCCTAAATATATCAAATTGACTGAAGTGACCATGGCAAACAA
ACGGGCAATTTATGATCAAATAAGCAAACAGCAGGTGTTTAAGTAACTTT
AACGTTTTCCATGGCAGCAAACCAATGCTATCTAAGTTATCAATCAAACA
CAAGAGACCGTGTTTTCACACAGGCGACTTATTTTGTTCCAGGGTCTGAA
TAAGCTTCCCGATAAGGAGACCATGCTGAAGCGGATCCGCTCCGACAAAC
AGGAGCTGAAGCAGCGGTTCGGCTACGTCAAGCTGCAGGTAACATGATAT
TCTCATTTTTCAGACCGTTATAAATGGGCAGTATAAACTTAGGGACAGAG
GAATAATGGGTATTATTGTTGTGCAGAAAAGAAAGTTGGGCAAGAGACAA
TACACAGTTATGACTACAATTACACTAAAGTTAAAGCTGGTGTTTCAGGC
AATAATGGATATTTAGAAGAACATTGGATTCAAGCTATTCTCCTTATATA
GGAGCATAGGGGTCGTGCTTTTTTACTTATTATGTGCTGTATTTTAGGTG
GTGTATTAGTTCTGAATGTACCCCGTTTCTCACGGTAGTCAGCCTCCCAT
GTTGACTTACAATCAGAAAATATATGATCCCTCCCCCAAGCAAAACCCGT
ACAATGAGCCTGCTAAGAAGTCTAAGAAGTGTTTATCTTAAGAAATAACG
TAACGTGATAGGGACAGTCACGAAGTGTGTACTTCATGTTCACACTAACT
TAAATGGCATCCTGTCTATGTTACAGATGATGAACGTGCCGTACCGGGAT
GACATTGCCGAAGAGATCGGAGTCAAACCATCATTTTGGAGGCTCCTTCC
TCGGGACCCAAAATTAGCTTTCCTCTGCTACTTCGGCCCCGCCTTCTCTG
TCCAGTACCGCCTGCTGGGGCCGCATCCCTGGTCAGGTGCAGCCGGCCAC
GCCAAGTCAGCCCTGGCCAACACCCTGTACCCCTTCGGGTCACCTGCTCT
GGACAAGGAACAGTCGGGCCTTTCACTGGCCAAAGTTGTCAAGTTTCTCT
TGTTGGTCGGGGTGCTGATGGCGGTGTTTAATCGTTTTATGTAATATCAA
TCTAAACAAAGATCCCCAATTCCATACTTTGGAATGGTGATGTATTCTAG
GATTGTTTTGATAAAGTGCTTCCTTGAAATCCCACTAAGGCTGCACCAAG
TAATTTTTATGGATGACGTCCTTTGGAAACCCTAAATCTAATGCGAGAGC
GCGAAAAAAAAACAAGAAGGGCCGAAAAAACAAGATGCCTAGATTTGAAA
AATCTTGTCAGCAGGAAACATCTGCACTGCTGACAGGATGATCAGTAGAA
AAATTGCACTACTGAGAGGACGATCCTGTCAGCAGTAGAAAAAATGCACT
GCTGACAGGATGATCCAATTTTTTTTACTGATGACAGGATCATCCTGACA
GTAGGTAGCCACTTCCTTATCTATGCATTTTGCGTGACGAGTTATATGCA
TTTTGCGTGACGAGTTTTACATTAATCTTACGATTTCCGGCACTGTCGTA
ACTCTTTGGTCATAGTTACAGGAAGCGGAATTTCTTGTTTTTTTTCTGGG
TACAGACCAAAATCAATGCGCGCGCGGACGTCATCCATAAAAATTACTTG
GTGCAGCCTAATGTGAGTTTCACAAGAATCAATATTGTTATTTCAAATGG
AGTCTATGTACCATAGTTCAATGACATGTTGTTGTTTTGCCGCGGTGTTC
CACACTCACGATTTGAAAACAGAGCTAAGGGTTTGGTACTTCATATAGTT
TATAATGGGTGGATTAGTTACGATAAAATTGAGTAATACGGTTACAAATG
GAGCTCATTAGACATTCACTACGCAGTGAGTATAGATATAGAGAATGTTA
TGATAAAATGCTATGGAGATCTCGAGAAGATGGGTGAATGCTGTCTGTAG
TTTCAAACGATAGTGACAATGCCTGTTACTGCCTACCTAGACATGGCAAA
AGTTAAACTAAAGTGTAACGTTATAGTGAATAAAATGAAGAACGAATATT
GCATCCACTCAAAATGTACCAAGATTCTTTTTTTCAATCCGTCTTGTCAA
TTTTTACTATTGCAACCGACTGAGTTTAGTAAAGACTAATGAAC Coding sequence (CDS) from alignment at Sc0000230:38743..46936- >BlTCONS00113737 ID=BlTCONS00113737|Name=BlTCONS00113737|organism=Branchiostoma lanceolatum|type=CDS|length=1647bp|location=Sequence derived from alignment at Sc0000230:38743..46936- (Branchiostoma lanceolatum) CTTCGTCGAAAATGCGTTTCTCTTCCGAGAAAAGCCATGGGTTCTAAGAG AGTGGCCATTATTGGAGCCGGAGTGAGCGGACTCACGTCAATCAAAGCTT GTCTGGAGGAGGGGCTGCAGCCTGTTTGTTTCGAGCAACATGAGGATCTC GGCGGCGTGTGGTACTACTCTGACGATGTCAGGCCCAACCAGGGGGCCGC CATGTACCGCTCTCTCATCACAAACTCCAGTAAAGAAATGATGTCATTCA GCGACTTCCCCTTTCCCAAGGACACGCCCCCCTACCTGCCGTACCACCGT GTGCACACATATCTACAGGACTACGCTCAGCACTTCGACCTGAAGAAACA CATCCGATTCGGCACACAGGTCAGTCGCATAGAGAAGACAGAAGACTTTG ATGAGACTGGCCGGTGGGAGGTCCGTACTGTACAGACGGGTCACAGCGAT GGGGAACAGACAGAGATTTTTGACGCCATCATGGTGTGTAACGGCGTGTT CGCCCGGCCGTACGTTCCAGACGTGCCTGGTCTGTCGGACTTTGCAGGTG TCACCATGCACAGTCAGGAGTACCGGACTGCCCAACAGTTCACGGGGAAG AAGGTGGTTGTTGTAGGGGCGGGAAACTCTGCAGGCGACGTGGCGGCGGA GATCGCTCAGGTGGCGTCACAGGTATACCTGAGTCTGAGGGACGGTGCCT GGGTGCTTCCCCGGCTGGCTCAGGCCGGGGTGCCGCGGGACATGATGCTG CGCCGGGTACTTATGGGCATGCCCGAGGTCATCGTCAACAAAATCATCAA GGGCGAGGCGAACGCCAGAGTGTGTCATGACAACTACGGGCTGACGTGTC CGGCGGACCCGCTCAAACACTCCGTCATGGCGAATGACGAGATAGGTTTC AGACTGGCCNAGATAGGTTACAGACTGGCCACTGGGCAGGTCCTCACGAA GCCCCAGCTCTCCCGGTTCACCCAGCACGCTGCCCGGTTCGCGGACGGCA GTACAGTGGACGGGCTAGACGCCGTGGTATTCGCCACTGGATTCAACCTG GCCTTTAACTTCAGTGACAAGTCCATCCTTAATAATAACGCGGAGGACCT GAACTTGTACAAGTTGGTGTTCCCTGCGGAGCTTACAAAACCCACCCTGT CTGTGATCGGCTGCCTGTCTACCATCGGGGCACATCCTCCTATCTACGAA CTACAGGCTCGCTGGGCCGTCAGGGTGTTCTTGGGTCTGAATAAGCTTCC CGATAAGGAGACCATGCTGAAGCGGATCCGCTCCGACAAACAGGAGCTGA AGCAGCGGTTCGGCTACGTCAAGCTGCAGATGATGAACGTGCCGTACCGG GATGACATTGCCGAAGAGATCGGAGTCAAACCATCATTTTGGAGGCTCCT TCCTCGGGACCCAAAATTAGCTTTCCTCTGCTACTTCGGCCCCGCCTTCT CTGTCCAGTACCGCCTGCTGGGGCCGCATCCCTGGTCAGGTGCAGCCGGC CACGCCAAGTCAGCCCTGGCCAACACCCTGTACCCCTTCGGGTCACCTGC TCTGGACAAGGAACAGTCGGGCCTTTCACTGGCCAAAGTTGTCAAGTTTC TCTTGTTGGTCGGGGTGCTGATGGCGGTGTTTAATCGTTTTATGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
BlTCONS00113737-exon-Sc0000230-1564993656:46902..46936 | BlTCONS00113737-exon-Sc0000230-1564993656:46902..46936 | Branchiostoma lanceolatum | exon |
BlTCONS00113737-exon-Sc0000230-1564993656:43918..44034 | BlTCONS00113737-exon-Sc0000230-1564993656:43918..44034 | Branchiostoma lanceolatum | exon |
BlTCONS00113737-exon-Sc0000230-1564993656:43221..43438 | BlTCONS00113737-exon-Sc0000230-1564993656:43221..43438 | Branchiostoma lanceolatum | exon |
BlTCONS00113737-exon-Sc0000230-1564993656:43006..43119 | BlTCONS00113737-exon-Sc0000230-1564993656:43006..43119 | Branchiostoma lanceolatum | exon |
BlTCONS00113737-exon-Sc0000230-1564993656:42572..42704 | BlTCONS00113737-exon-Sc0000230-1564993656:42572..42704 | Branchiostoma lanceolatum | exon |
BlTCONS00113737-exon-Sc0000230-1564993656:42398..42453 | BlTCONS00113737-exon-Sc0000230-1564993656:42398..42453 | Branchiostoma lanceolatum | exon |
BlTCONS00113737-exon-Sc0000230-1564993656:41782..42048 | BlTCONS00113737-exon-Sc0000230-1564993656:41782..42048 | Branchiostoma lanceolatum | exon |
BlTCONS00113737-exon-Sc0000230-1564993656:41392..41536 | BlTCONS00113737-exon-Sc0000230-1564993656:41392..41536 | Branchiostoma lanceolatum | exon |
BlTCONS00113737-exon-Sc0000230-1564993656:40938..41086 | BlTCONS00113737-exon-Sc0000230-1564993656:40938..41086 | Branchiostoma lanceolatum | exon |
BlTCONS00113737-exon-Sc0000230-1564993656:40599..40694 | BlTCONS00113737-exon-Sc0000230-1564993656:40599..40694 | Branchiostoma lanceolatum | exon |
BlTCONS00113737-exon-Sc0000230-1564993656:38743..40110 | BlTCONS00113737-exon-Sc0000230-1564993656:38743..40110 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000230 | genome | Sc0000230:38743..46936 - |
Properties
Property Name | Value |
GeneID | BlCUFF055760 |
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