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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000230:369570..377063+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113690 ID=BlTCONS00113690|Name=BlTCONS00113690|organism=Branchiostoma lanceolatum|type=mRNA|length=7494bp|location=Sequence derived from alignment at Sc0000230:369570..377063+ (Branchiostoma lanceolatum)
TAGATTCAGGCACCAAGAAGTTGAAGATGATGGTGAAGGGTGGAGCAGCT
GTAGACCCTGACTCAGGTGAGAAGGATGCTGTTGTAACCAAATTGATCTT
GGGCTTATTTATGACGAACCAAACAGAAAGTGTATTTAGTCTCTGTGTGT
CTTTTGAACACATATGTATTTGTTATTTTTGTTTGAATGAGGCAATTATA
TCTGTCTTAAACACCAACCTCTAGCCCTCCTATGTTATGTCCTCTAATAT
TTCAAATTTTATTGTATGGTTTGTAATAAGGTTTCAACCNGGATGGTTTG
TAATAAGGTTTCAAGCACAGTTTTATTGCAAACAGTTCTCTTATTTATGT
TTCAGGAATTGACCATTCTGCCCATGTCATTGAGGACAAAGGAAAGGTGT
ACAATGCTGTACTTGGTCTGGTAGACTTGGTAAGAGGCACAAACTCTTAC
TACAAGCTACAAGCCTTGGAGGCTGACAAGGGGAAGAGGTATGTGTCATA
GCAACAACTGTATTAATGATACCCTTGTTGTTATATATACCACATTGATG
TCTTGATGTGAAATATGGTATATGTATTGTCCTGCATAGGGCTATTCATG
TTGTTTGAATAGATCTGAGAACTCAAACTGTCCATTTCTATGACAGGTGA
CTTGAGTTATGCAAAGCCAGCACTTGGAAAATATTTTGAAACAGTTAGTC
TTGTCATCTTTGTCTAAGGAATGCTTAAAATGATGTTACGTAACCAAGGC
TCTTGGATACAAAAGAAAACAGGTTGTAAAACAGGTACCCCTTGCGCTGA
CAACTTTACTCTTGTGTTCTTTTAGGTGGTATGTGTTCAGGGCATGGGGA
CGAGTAGGTACCACAGTGGGTGGTAACAAGCTGGAGACCTTCCACTCCAG
ACAGGGGGCCCTGGAGCAGTTCCTTAACCTGTATGAGGAGAAGACAGGTT
ATTGGCTTATGTTCTTATTCACAACTAACATCTGCAGACACTAATACTGG
TTGTAATAGCATTGTATTGAAACAAGTACGCTGCAACTGTGCCCAGCACA
AGTCAAACTTGCTACTTCAGACTTCTCTAGATTGTTTTATTGATTATGTA
AATAGTTAAGCCATACTGGGAGTGATACCTACGTTGGGTTTTGCCCAATA
TAGTAGATAAGATAAGATACTGCTGGAAGTTTGGATTTTTAAATCTCTTT
TTCCTGTAAACAGTGCTAGATCTATATCTTTGATTTCAGAGAAAAGAAGT
ATTAGTCATTATCATGAACTGACAGTTTTGATGTTCTATCTACAGGAAAC
GAATTTGGAACCAAGAACTTTGTGAAGCACCCAAAACGATTTTACCCATT
AGACATTGACTATGGACAGGTATGTCTTCTTCTTTGTTAACATTCTCCAG
AAAGCAACAATTTTCAAAGCAGCATAGGATATGGTGGTTGATTCCTTACC
AAGCTATTGTATTATTTCATGTTGCCTTTTCTGTCCATGATATGATACTA
TTTTATAGTCATAGTAACAGTTTATTGCAATGCTGCATCATACTGTAAAT
CGAATGCATTTAACTTTGCTGTGGTTTAATGATCGTGAATTTTGCAGTGA
CCTCTGCACTGCAAAGTACAAACCACCGCAAACACTCCATTTTCTCAGTA
CCGCATTGCCAAGATTAAATCATCATAGATGCATTCTCCATACATAATCC
AAGTGCATCTTGTCCATGTACCCGTAGGAGGAGGAAGATCTGCAGAAGCT
GAAGATCAAACCAGGCTCCAAGTCTGCTCTGGCCCGGGAGGTTCAGGAGA
TCATACAGATGATCTTCGACATTGAGAGCATGAAGAAGGCCATGGTGGAG
TTTGAGGTGCTCTGATCTTTGTTACTATCAACAGCTCATCAAAAGTTTTG
GCTGTAATAAATTTGCTTTATAGGTAAGCAGAAGGTAGTGTTATCCCTAG
CTTAATGGAAATATAAGATGGTACTTCTACATTGTAAGTATTCAAGAATG
TTTGGACCAAATCAAAATAATGCCAGTTGTGCATGTAATGAAGTTATGCT
GACATGTTATTGTCACTGTTTTAGATTGACCTGAAGAAAATGCCATTAGG
CAAGCTGTCACGGAAACAGATTGAGAGTGCCTATAGTGTGCTGACAGAAC
TGAATGGGGTAGGTATGCACATTTTCCTGTGTCAGAATGGAATCTTAAAC
GTGGTGTACATGTATAGCACAGGACATGTGTCATCTCTACCTGATGTAAA
TGTGTTATCAGACGAATCACATCAAGGAACAACTTTTGTAAAATGTAAAA
CCTGGGATTGCTGTCATTCCTTTTTTTATGATATGTTAAGCATATTTCTT
GATGTACTGTTTGTAGCATGATATTATGCTTGGTTGGTTTACTTACACAC
GTTTGATCTGTCACACTATAAATTCTCGTGACAGATGAATGAATGAGTTT
ACTGATATCTTCTGTGTATGTTGTAGATCCTGACTGGTGAGAAGAGTGCC
ACAAGAATCCTTGATGCCTCCAACCGATTCTACACCCTCATCCCTCATGA
CTTTGGCATGAAGAAACCACCCATGTTGGACAACGTGGAGGTCATCAAGG
TACGAACGTCCAGAAAAATACGAAATAGTCAGTTTCTTCCTTGCTACATA
TCGAGAAATATCTGCCCCCTTCTTTACTCATCAAAACTAGAATGTCTGTT
ACCTTGACCTCTGCATTGTTATTTTGCATTTGTAAAATTCAAAGTACCAA
GCTGACCAGGACTTCTTGTTCAGGCCAAGACTACTATGCTGGACAACCTG
TTGGAGATAGAAGTGGCCTACAACCTACTGAAGAGTGGAGATGATGGGGA
GGGCAAGGACCCCATCGATGCCCACTATGACAAACTCAAGTGCAAGATGG
AGGTAGGTGTCTAAAGTAGTACTGAAAGATGACTGCATGTCGAGTATGCT
GTGTATCATATTTGCAATTAAACACCCCATTAGATGGAGATACATGATAA
ATTTATGTATTATAGGCTTTTTACTTTAACGAATACACTAGAATTGATGT
GGGAAACATAGCACAAATTTAAGCAAGGTTTTAAGAATTTATGTGGTACT
AAAGTGACCCTTTTGATTTTATACAAATGATGTTTGTACTGTTGTAGTTT
TACTATTTTTCTAAATACAGGAAAGTTAAAACCATTAAGTAAGGTGATTT
GTGTGCTTTGCTTGTACATTTCAGGTTGTTGAGAAGAGCTCGGATGAGTT
TACCTTGGTGCAGGACTATGTGAAGAACACCCATGCCAAAACACACAGCC
ATTACTCCTTGGAAGTAGAAGAGGCAAGAATACACTTTGAACAAAAATAC
TAAATTGTGAAAATTGTATACTGAGAAGTTAAATCAATATTCAGTGCCAC
GTACACTAGTTAGTAAAGGTGCTATTTGAGTATGAGCTCAACTTGCTATT
GGTATGTCAGTTGTATGAATTGCTGATAGGCCCTAAAAGTTTTTTCTCAT
CACTTGTTAGTTGTTCAAGATTGCTAGGGAGGGAGAAGCGTCCCGATACA
GGCCCTTCCAGCAGCTGCACAACAGACAGCTCTTATGGCACGGTTCTCGT
GTTACCAACTATGCTGGCATCCTTTCTCAGGGACTCAGGATTGCACCCCC
TGAGGCCCCTGTGGTGGGTAGTGATTTGTGTTTTGATTATTTCCTTTCTA
TATAATCTACAGAGTTGTTTTCATCAGTGACTGTAATTACTTAGCCTGGT
TTCAACCAAGCCCCGTGTCCGCCCGCCGCCTGTAACGGCTATCCACCCAC
GGGGAGGGGAGAGAAACCCCCGGACAGCTGGAGTTTGCGTGATACAGACT
AGTAATTACTTAGCATTCAGTGATTTAACGTCCTGGTAGAAGTGATTAGT
TTTCTTGTTGTTGGACAAGTTCTTTTGTTGTTAGATTGAAAGTATGGCAG
TATGAATTTGGATGTACCTAGTATTTTTTTTATCATTAGATGATACATCA
GAAAGTGTCGGGTTTTGGAATTTCATGTGCAGAAGAGGTAGACTAGGAAT
GTCTTGAATGTTTTATTTTACTATATAGTCATGATGAAGTCAGACTTTGA
TGCCTATGTCATCGACTATCAGATGTCTTTAAATGTCATTGTAAGGTGTT
TGAAGAAGAGTGCACAGTCTTCACCTGTAATCACTTTATTGAAAAGTGTG
TCCCTTGAATCTACGAAAAAGTGCTCTTTGGTTTGGTAACAAAGCCAGAC
TAGAAGTGCCTTTACTTGCTAAGTTGCTAACCACCATTTCTTCACCACCC
CACAGACTGGCTACATGTTTGGGAAGGGTCTGTACTTTGCTGACATGGTG
TCCAAGAGTGCTAACTACTGTGCCACGTCCACGGCCAGCCCCACCGGACT
GCTGCTGCTCTGTGAGGTGGCGCTGGGAAACATGTGAGGACACTCAGTTA
CAACCATTAGCATGTCTTCCAGAGACATAAGTGTTACTAGTGGGGAATGC
GGTTCTGAACACAGAAGGTCCCTTGCAATAGCCTCTTTGTGATACATTCC
AATGAGAAGCTAGAATATCTCACTGAGAGGTGTCTATTCATTATATGGAT
CTGTTAACCACAAAGAAGCTATTGCACTGTTTTATGTTTTCGACTTGAAT
GAGATGTGACAAAATAGATGCTTTATACTGTACTATTGTCTTGGTAGCAT
TGTGTTGGTCAGCTCCACAACATCAGTCTAATTGAGTACCACCTTGTATA
CATTTGATATATATTTGAATACATCAGTGTAGAGAAAAACCTTGAAGCAG
AAATGTGATTCGTTTTCCATACCCTATCTTACTAGACAATATGTCCTTGT
TGAACAACATATTGCAAACTAATGTTGTCTGACTTTTCACCCCACACAGG
TATGAGAAGAAACATGCAGAGTATGTCTCCAAACTTCCCAAAGGCATGCA
CAGTACCAAAGGTTGGTCACTTTATTGGAGTCTAGTGGAGCCATTGGTCA
GGCAAAGGAGCAGGATAGTTGTTTTGTGTGGTGTTATTTTTATAAACAAA
GCTACTGGATTGAGTCTAGTAACTTTGCTAAGTTCCATGTTGAGAAATAA
ACTGCCCATACTCTGTCATTAGGCTTCTCTTTTTCCAGGAATGGTCAAAA
TGTCACTAATACAGAACCCCTTCCATTACAGCTTGGTGTTCCATAAATGG
GGTCACAATTGCACAATGGGTTTTAATTTGATCTTGTAAATGGGAAAACA
AAGTGTGTAGAAAATTAGCAATGGCATAGTGTCATTGTCTTTCACTTCAA
GTTGGACCCCACACCTGTCCACAAACCACTATTCACAACATGACTTGTTT
CACCTGATCAGTTTTGAGGTGGGATATTTTGTATGTTGTATGTTGTGGAT
GTACCGACTGATAATTATCTAATACCAGCCCAGAAAAGGACAAGAAATAG
TCATGCCTTTAAGTACCAGAGTTATAAACCAAGGATTGATGTGTTCAAAA
ATTCGTTTTTCCCGAGAACCATAGTAGAATGGAACTCGTTGTCATCAGAT
GCTGTAGGAACACCTTCACTAAATAGCTTCAAAGAACGATTGCAGTCAGA
TGAGCAAAAGTTAGGTGTGACAGGCCGTTCAGTGTAATATAACCAGCTGC
TGCCGCGCCGCGTGCCTGCGAAGCTGGTGTGTTACGCCGAAGGGCGGTTA
TACCGGCTATACAGATACAGATACAGATATGTTCTTCCTGCAGGACTTGG
ATCCACTGGCCCAGACCCTGCGGCTACAAAGACACTGCCCAATGGTACCC
AGGTTCCCATTGGTGTTGGGGCTCCCAGTGGTGTGACTAATTCCAGTCTG
CTGTACAATGAGTATCCTTTTTATCATGTTCTTCATTTCTATCGGAGCTC
ATGCCAAAGGTTGTCCAGAAAGCAGCCTAATGCAAGGGTCACATTCCCAT
ACTGGGGCCCAGCCGGGCTGTTAGTAGAAACGAAAAATAAAAGTGTATAT
CAAGAAATATGCGCAAATTATGCTAATGAAAATTTTATTTCACATTTTTT
GTGTTTTGTTGTCATTTATGTAATAATTTTCCTTCCCTCAAGCTGCACCG
TCAGGCCCCTGTTTTGATCTACTTTTTCTAAATTTTAGAAAATTTGTGTA
CATTATGGCCAATTTTGAAATCATTAGAACATAATTTTGCACTTGTCTCA
ACTATACCGGTATTAGGTGGTGGGAGGAAAGATCCTAGTATACATGTTTG
AATTGAACATATCTGTTGAGATAACCTTGGACATTACATGTAAAGAGATT
TTCAGAATCATGCCTTGAAGTACATCTATTAACTTAATACATGTGTATCA
TTATTTGCTTCCACCGCAGTTCTGATTAAGTCAGGTGAAATCCTTAACAG
TTTGTCAGGTATATCGTGTACGACGTGGCGCAGGTGGAAATGAAGTACCT
GATCAAGATGAAGTTCAACTACAAGAGTCTGTGGTGAGGAGCTAGCTACG
GTGGGACCTGGCCCTGCATGTGTTGTCTCTGCAAACAGGAGGAATATTGT
ACCACTAGGTCTTGGTTACGTCACAACAGGGTTTCAATAACATTGTGGGA
GCCATTGTCAAGCTATTGCTGATGTTTACTAAAACTGTCTCTAGGTCACT
TATAACAATTAGCAACTAGTAATCATGTACAAGCTGGATGATTGTAGTTT
GACTAATCACATTATTTTCAACTAATTGTGGTTGAAATCATGCTTATGGA
GGTGTTACCGCTTCCATGTAAACTCACCCACTTTGCTAAGGAGCAAAGTT
GTCATCAACCTCTGAATTGGAAATAGAGATCAGTAGAAAGCGCCTGTTGC
CAAAGGTAACAGTCCAAATTATACCAGTTAGATTGTAAGACAAAGGATGG
TGCAGCTGTTTTGTTGCCTTTATTATTTTCAATACATGGGAGACACTCTT
GAGACAAGACTTGAAGGAAGGAAATGTCAGCATAAATCTTAGAAGGCTCT
GGTTTGATTCCTTGGCACCAAGACGACTTGGTGTGAAAGTGGAGGCAGAT
GCTTTCAGTATTTTTCAAAACTTACGTTCCATGTAGTTGTAGTGGAAATG
TATATGTTGTTGCCTTTAGTTGCGTTTAGTTCCCTTGTTAACAATGTCTT
AAAAATTTTTTTATTTCTCCTGAGATGAAGATGAGATAACCTATATCAAA
GTTACTTAGAAACTCTATTGTTAGAGATGTAGCAAAGTTTACTAAATTGC
AGAGCAACAGTATGTCGAGTAGTTTATCTTTAGTCCAAAGATGATTGTTC
TTTACTGACATAAAGCACATCTTAACCTCTCAGAAAGGATGGTAGTCAAT
AAAAAAAGTCTACCCCCAAGCATTCAAATGTTTCTGTCTTTATCATAGCA
TAAGCTGACAGGTTGATGTCAGATATTGAAATCTTTGGTTAAAAAAGGTT
ACAAAGTATAGGTGGTAATTATATTTCAGTTAGTAGCACAGAGC Coding sequence (CDS) from alignment at Sc0000230:369570..377063+ >BlTCONS00113690 ID=BlTCONS00113690|Name=BlTCONS00113690|organism=Branchiostoma lanceolatum|type=CDS|length=1242bp|location=Sequence derived from alignment at Sc0000230:369570..377063+ (Branchiostoma lanceolatum)
GATTCAGGCACCAAGAAGTTGAAGATGATGGTGAAGGGTGGAGCAGCTGT
AGACCCTGACTCAGGAATTGACCATTCTGCCCATGTCATTGAGGACAAAG
GAAAGGTGTACAATGCTGTACTTGGTCTGGTAGACTTGGTAAGAGGCACA
AACTCTTACTACAAGCTACAAGCCTTGGAGGCTGACAAGGGGAAGAGGTG
GTATGTGTTCAGGGCATGGGGACGAGTAGGTACCACAGTGGGTGGTAACA
AGCTGGAGACCTTCCACTCCAGACAGGGGGCCCTGGAGCAGTTCCTTAAC
CTGTATGAGGAGAAGACAGGAAACGAATTTGGAACCAAGAACTTTGTGAA
GCACCCAAAACGATTTTACCCATTAGACATTGACTATGGACAGGAGGAGG
AAGATCTGCAGAAGCTGAAGATCAAACCAGGCTCCAAGTCTGCTCTGGCC
CGGGAGGTTCAGGAGATCATACAGATGATCTTCGACATTGAGAGCATGAA
GAAGGCCATGGTGGAGTTTGAGATTGACCTGAAGAAAATGCCATTAGGCA
AGCTGTCACGGAAACAGATTGAGAGTGCCTATAGTGTGCTGACAGAACTG
AATGGGATCCTGACTGGTGAGAAGAGTGCCACAAGAATCCTTGATGCCTC
CAACCGATTCTACACCCTCATCCCTCATGACTTTGGCATGAAGAAACCAC
CCATGTTGGACAACGTGGAGGTCATCAAGGCCAAGACTACTATGCTGGAC
AACCTGTTGGAGATAGAAGTGGCCTACAACCTACTGAAGAGTGGAGATGA
TGGGGAGGGCAAGGACCCCATCGATGCCCACTATGACAAACTCAAGTGCA
AGATGGAGGTTGTTGAGAAGAGCTCGGATGAGTTTACCTTGGTGCAGGAC
TATGTGAAGAACACCCATGCCAAAACACACAGCCATTACTCCTTGGAAGT
AGAAGAGTTGTTCAAGATTGCTAGGGAGGGAGAAGCGTCCCGATACAGGC
CCTTCCAGCAGCTGCACAACAGACAGCTCTTATGGCACGGTTCTCGTGTT
ACCAACTATGCTGGCATCCTTTCTCAGGGACTCAGGATTGCACCCCCTGA
GGCCCCTGTGACTGGCTACATGTTTGGGAAGGGTCTGTACTTTGCTGACA
TGGTGTCCAAGAGTGCTAACTACTGTGCCACGTCCACGGCCAGCCCCACC
GGACTGCTGCTGCTCTGTGAGGTGGCGCTGGGAAACATGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
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| BlTCONS00113690-exon-Sc0000230-1564993656:369570..369635 | BlTCONS00113690-exon-Sc0000230-1564993656:369570..369635 | Branchiostoma lanceolatum | exon |
| BlTCONS00113690-exon-Sc0000230-1564993656:369925..370057 | BlTCONS00113690-exon-Sc0000230-1564993656:369925..370057 | Branchiostoma lanceolatum | exon |
| BlTCONS00113690-exon-Sc0000230-1564993656:370395..370516 | BlTCONS00113690-exon-Sc0000230-1564993656:370395..370516 | Branchiostoma lanceolatum | exon |
| BlTCONS00113690-exon-Sc0000230-1564993656:370865..370938 | BlTCONS00113690-exon-Sc0000230-1564993656:370865..370938 | Branchiostoma lanceolatum | exon |
| BlTCONS00113690-exon-Sc0000230-1564993656:371297..371425 | BlTCONS00113690-exon-Sc0000230-1564993656:371297..371425 | Branchiostoma lanceolatum | exon |
| BlTCONS00113690-exon-Sc0000230-1564993656:371644..371727 | BlTCONS00113690-exon-Sc0000230-1564993656:371644..371727 | Branchiostoma lanceolatum | exon |
| BlTCONS00113690-exon-Sc0000230-1564993656:372046..372168 | BlTCONS00113690-exon-Sc0000230-1564993656:372046..372168 | Branchiostoma lanceolatum | exon |
| BlTCONS00113690-exon-Sc0000230-1564993656:372343..372471 | BlTCONS00113690-exon-Sc0000230-1564993656:372343..372471 | Branchiostoma lanceolatum | exon |
| BlTCONS00113690-exon-Sc0000230-1564993656:372794..372892 | BlTCONS00113690-exon-Sc0000230-1564993656:372794..372892 | Branchiostoma lanceolatum | exon |
| BlTCONS00113690-exon-Sc0000230-1564993656:373080..373232 | BlTCONS00113690-exon-Sc0000230-1564993656:373080..373232 | Branchiostoma lanceolatum | exon |
| BlTCONS00113690-exon-Sc0000230-1564993656:373875..374530 | BlTCONS00113690-exon-Sc0000230-1564993656:373875..374530 | Branchiostoma lanceolatum | exon |
| BlTCONS00113690-exon-Sc0000230-1564993656:375313..375430 | BlTCONS00113690-exon-Sc0000230-1564993656:375313..375430 | Branchiostoma lanceolatum | exon |
| BlTCONS00113690-exon-Sc0000230-1564993656:375978..377063 | BlTCONS00113690-exon-Sc0000230-1564993656:375978..377063 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000230 | genome | Sc0000230:369570..377063 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055750 |
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