BlTCONS00113675 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113675
Unique NameBlTCONS00113675
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000230:338729..340854+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113675 ID=BlTCONS00113675|Name=BlTCONS00113675|organism=Branchiostoma lanceolatum|type=mRNA|length=2126bp|location=Sequence derived from alignment at Sc0000230:338729..340854+ (Branchiostoma lanceolatum)
GACTTACAGAGGTCGCTCCCCTGCTCTTCTGTACCTCATTAACAATGACT
GACACTTCAAAATGAATCATCATGTGCCGTTATAAGTTGGATATAGCTTC
ATCGCTCATGCATACAAGAAGTGATGCACGGTTATTTGAGTTTCTGCCAC
AACAATCAAACACATCAAGGACTGCTTTCTTCACATTGTATCCAGGGCTT
GACGTAACAACAGGCAGCCTGAAATGCTTTTTTCTGATGCCCATTTATGA
GCTATTGCAGTATCCAATTTTATCAGACTTTTCCCTCAGAATATAGCATG
CAACTTCTTTTTTGCCATTCAAATTGTGAATATCTGCTGCTATCCCGGGA
AAATTGTCATGAGTTCTTTGTTTTTGAAGTTTTTCTGTAATAATGTGTCT
TTCATGCAGGCTCGTAGCCGTCTCGAGCTGAGGGAGACAGCTACCAGTCA
GGATGCTCAGGATGTGGTGGAAATCATGAAAGACAGGTCAGATATTTTGT
AATGGAGTGAATCGGAAATGAAATATGCAGATTGGGCCATCACTTGACTT
GCTGGGACTTTCACAAAGGTGATTTGTGCTAAGGGTATGAGATGGATGTG
TATGTCATCAGGCATAACATAATTATGCAGTATTTAAAAATTGATAATCA
TGTAGACTGAACCATCATTACAAAAAGCATATATTGCTTAACAAAATTGA
CATGCCCAGGATGACAGTGTACGCTATATTAACAAAACAAAATAATGGGT
GCTATTTGCATAACATTGTTTAATCCATTCAAAACCACATTTTTTTCTTC
AGCATGTTTGACACGTACTCAGATGAATTTGGACAACTGGATTTCCTCAG
ATCACAGAATGGGTCAGGCATGAGCTGCAGGAGCAAGGTCAGGTCAAAGT
ACATACTGGTTTAATACCTGGCTGTATTTTGTATATATATGTATGCCAAT
TGATTTACTTATGACACATTTTATTACACCCTGTAGCTGTTGTTATTCAG
CTTGTATTAATACAGTACCTGATAAAAGTTTTTGTTCACACCGCATGGAG
TTTTATGAAGTCTTAATAGTTAATCATAGTTAATCTCAAGTGCAGGTACT
TTGAAATGGTTGTAATTTGTTGGTGTTATGTTTCCGTAGCCGAAGAGGTT
TGTTGCTGCCCTGAATAGAGTAGCAGAACGGACCTACAACAACATCTTTA
CTGTGCAACAGATGAGGGAGATTGCTCAGGTTTGTATTGGGACTTTGATG
AAGTTCAAGCAAGATATTGTAATGTGTCTTTGATTCACCGTTTCCTCCAC
ATCTTGGGCATCCTGACTGGTAGCTGTCTCCCTCAGCTCCAGACGGCTAC
GAGCCTGCATAGAACCCAGACATTATCATGAACAAACTTAACGATGAACG
AAATCAGAGACCCGATCTTTACCATACATGCAATCTGATGATATGGCCTA
GCCCTTGGATAATGATGAAACATGATAAGCACAGTATCTTGCATTACATG
CTAGATCTGAACACTTTCTTGTGCAAAATGTGGAGGAGATAGTAGGAATA
TATCACTAGAAATAAGTCAATGCGTGTACAGGCACATTTAGCATACCTCT
TTTCCTCTGCAGAATTGTGATGTGAAGGTTCCAGACTTTGAGGGATTCAT
TGCCTCCCTTAACAACCAAGGGTACCTGCTGAAGAAGGGTTCCAGAGTGT
ACCAGCTACAGACTGCTGGGCTCTGAGGGAGGCATCCACCCCACTCACTC
AAGTACAGGGTACAGTCAGCTATCCTGGAGACCTGGGGTTGGATGTTAAC
AGCAAGGCGACTTGGACTGAATCAAAACAGAATTTGAGGACTCAGAAGGA
GTGACTGAAAAACAAGGACATACCTAGTAGATAACTGTTGTGTTTTAAAT
GTTTGAATCGCCCTGGTTTCACAGAAATCTTGTCTTATATCTCACATGTT
TCTATCTCCAGATGGTCTATGTTATGTTGCATGTTTATCAAGTAAATTTA
TATCAGTACTAGCATATCTGGTCATCGATATGCCAGTTTGTTCTATGTAT
TTATTGTACCATAGCATGAAGAAGGAGAATAAAACTGCAACCCGAGCATC
GCATCGGCTTTTTAGCGAATGCCCAC

Coding sequence (CDS) from alignment at Sc0000230:338729..340854+

>BlTCONS00113675 ID=BlTCONS00113675|Name=BlTCONS00113675|organism=Branchiostoma lanceolatum|type=CDS|length=378bp|location=Sequence derived from alignment at Sc0000230:338729..340854+ (Branchiostoma lanceolatum)
GACTTACAGAGGGCTCGTAGCCGTCTCGAGCTGAGGGAGACAGCTACCAG
TCAGGATGCTCAGGATGTGGTGGAAATCATGAAAGACAGCATGTTTGACA
CGTACTCAGATGAATTTGGACAACTGGATTTCCTCAGATCACAGAATGGG
TCAGGCATGAGCTGCAGGAGCAAGCCGAAGAGGTTTGTTGCTGCCCTGAA
TAGAGTAGCAGAACGGACCTACAACAACATCTTTACTGTGCAACAGATGA
GGGAGATTGCTCAGAATTGTGATGTGAAGGTTCCAGACTTTGAGGGATTC
ATTGCCTCCCTTAACAACCAAGGGTACCTGCTGAAGAAGGGTTCCAGAGT
GTACCAGCTACAGACTGCTGGGCTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113675BlTCONS00113675-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113675-exon-Sc0000230-1564993656:338729..338739BlTCONS00113675-exon-Sc0000230-1564993656:338729..338739Branchiostoma lanceolatumexon
BlTCONS00113675-exon-Sc0000230-1564993656:339137..339214BlTCONS00113675-exon-Sc0000230-1564993656:339137..339214Branchiostoma lanceolatumexon
BlTCONS00113675-exon-Sc0000230-1564993656:339531..339615BlTCONS00113675-exon-Sc0000230-1564993656:339531..339615Branchiostoma lanceolatumexon
BlTCONS00113675-exon-Sc0000230-1564993656:339868..339957BlTCONS00113675-exon-Sc0000230-1564993656:339868..339957Branchiostoma lanceolatumexon
BlTCONS00113675-exon-Sc0000230-1564993656:340341..340854BlTCONS00113675-exon-Sc0000230-1564993656:340341..340854Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000230genomeSc0000230:338729..340854 +
Properties
Property NameValue
GeneIDBlCUFF055746