BlTCONS00113665 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00113665
Unique NameBlTCONS00113665
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000230:267352..269399+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00113665 ID=BlTCONS00113665|Name=BlTCONS00113665|organism=Branchiostoma lanceolatum|type=mRNA|length=2048bp|location=Sequence derived from alignment at Sc0000230:267352..269399+ (Branchiostoma lanceolatum)
AGTGTAGGCTGTACACCCAGAATGCCCTTGGTCAGAGGAGTGCTAAAAAG
GAGAGCAGCGTCCCTCCCCCTCCCATCCTCCTGTCCAGGACTGACACCAC
CATGATCTTCAGACCAGCAGAGTTCCATTCTACAAAACCGGTGAGGCAAC
AACTTCTTTTATAAAGATGATTACTGTAAATTATAATGTGTGTGTGACAC
TTTGATTCTAATATCATTTTCTGTTGGATTTTACAAGCATTGACTGTATC
TTGCTCGGGTTCTAAATGAATCTATACTGCAAATATTCACTCATACCTCA
TGTGTTCTTGTGTGTTACAGGTTGCTTGGTATAGGCTGTTTGGTTGCAGG
TCTAGCGGCAGTAACGTCAGGGTCAGGCTGAATGACTACTTCCTGGTCGG
GTCTGGAGAAGAGGTAATAACATCAAAATCCCTCTCTGAGAAAAAGACTA
GTGCAGTTATGAAGTGATAAATCTGTATGTATATTCAAGTAAAGTAAACA
GTGTCAACTCACTATGTACCTTTGATTGGAGACAATATTATGTTCCATAG
CCTTTAGTTGAATGAGGGAAATACATGTACATGTATCAGGGGAAGTTGAG
AGCACATTGTTAGTAAATATGCTGTGAACTGCTGTCTTTGTTTATTGACT
GTCTGCCTCTGCTCTACCTGCAGGTCCCAGCTNGGGAAATACATGTACAT
GTATCAGGGGAAGTTGAGAGCACATTGTTAGTAAATATGCTGTGAACTGC
TGTCTTTGTTTATTGACTGTCTGCCTCTGCTCTACCTGCAGGTGCCAGCT
CAGAACGGTGACTGTATCCTGACAGTGTCAGGCCTGGAGCCCAATGAGAG
GTACATGTTTGCTGTGGCTGCCTTCTCCAAGGATGGCAAGCTGATTGGTG
GATCCATCGGGGAACAGACCAAACCCATCCTGGCCTCTCATCCTCTGCCC
ATCCTCATGGCCTGGGCTCTGCTGGGACAGGTGGGTACAATATGTTTGAA
CAGTTTTGAAAGAAATGTGTGTATTGAAAGGTCTTAATAGTTTGATTGAC
ATGCTCTAAGAAGGTTGTGAAATATGTCTTGTGATAATGTGACGGAATAT
GTTTTACTTAAACAGATGTGTCAAAATGTTTCTTTAAGACAACAACTGGA
ATTAATGGACCATATTTTGATGAATACAGTACATGTGTACATGTTCCTAA
ACAATATTTTGTCTCATTTCAGGTGTCCTACCAAGTTGAATGTTACCCAA
TTGCTAAGAAGGCCTGTGATGTTCTGTGGGATCACTTTGTGGCCCCAGCG
CCCCCTCCTGAGACAAGCAAGTGGGAGATGGTGGCCAGGAAAGACTTCAA
GCTGACTTTGAAGCGGTGAGTTTGGCATTTCCTTGATCTGTATTTTCAAA
GGATTGCAGACCTTTCTTATAGGAACTATGGTGGTTGATGTGTATCTATA
TGGTAGAAAATGACAAAATGTCATGATACAACAGCAAACAATCCAGCAAC
GATCAATGGAGCAGTTATTTACCTTTTCTTCATGAAGCACACCACTTCTG
TACTCTATTGCAGACTCCACCCTGGAGTGGTGAGAGTGGCTTCCCCTGTG
CTGCTCCGACACTTCCTGACCAGCATCTTCATCCACGTGGACATCAACTC
TCGAGAAGGGAGACTGTTCTGTGACACACTGTGTGACAAAGGGCCACTTA
CCAGAGGACAGGTAAGGACAAACAGCAGTGTAGAGCAACATATTCAATTC
TGTGAAATAACAGTATGTTTAACATTCATTTGTTCACTAAAGTGTGTTGA
ACACAAGTATTGCATCCTTTCCAATCATGGACAGGCATTCATCATGAATT
GAATACCATTCAATATCAGTAACCTAGATTGATGTTGTCAGTGACAGGAC
TTTGTACTTTACACAGCTCTGCAGGCTGTACGAGTGCGAGCGGCTGCTGG
TGGCCCTGGAGCTGGCGGGCTATCTGAACGAGGCAGGTCTGGCTCTGCAG
GCTGTGGTGCAGTGTTATGGGCTCCTCACCCCTCTGCTGTTCAACAAG

Coding sequence (CDS) from alignment at Sc0000230:267352..269399+

>BlTCONS00113665 ID=BlTCONS00113665|Name=BlTCONS00113665|organism=Branchiostoma lanceolatum|type=CDS|length=675bp|location=Sequence derived from alignment at Sc0000230:267352..269399+ (Branchiostoma lanceolatum)
TGTAGGCTGTACACCCAGAATGCCCTTGGTCAGAGGAGTGCTAAAAAGGA
GAGCAGCGTCCCTCCCCCTCCCATCCTCCTGTCCAGGACTGACACCACCA
TGATCTTCAGACCAGCAGAGTTCCATTCTACAAAACCGGTTGCTTGGTAT
AGGCTGTTTGGTTGCAGGTCTAGCGGCAGTAACGTCAGGGTCAGGCTGAA
TGACTACTTCCTGGTCGGGTCTGGAGAAGAGGTGCCAGCTCAGAACGGTG
ACTGTATCCTGACAGTGTCAGGCCTGGAGCCCAATGAGAGGTACATGTTT
GCTGTGGCTGCCTTCTCCAAGGATGGCAAGCTGATTGGTGGATCCATCGG
GGAACAGACCAAACCCATCCTGGCCTCTCATCCTCTGCCCATCCTCATGG
CCTGGGCTCTGCTGGGACAGGTGTCCTACCAAGTTGAATGTTACCCAATT
GCTAAGAAGGCCTGTGATGTTCTGTGGGATCACTTTGTGGCCCCAGCGCC
CCCTCCTGAGACAAGCAAGTGGGAGATGGTGGCCAGGAAAGACTTCAAGC
TGACTTTGAAGCGGACTCCACCCTGGAGTGGTGAGAGTGGCTTCCCCTGT
GCTGCTCCGACACTTCCTGACCAGCATCTTCATCCACGTGGACATCAACT
CTCGAGAAGGGAGACTGTTCTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113665BlTCONS00113665-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00113665-exon-Sc0000230-1564993656:267352..267491BlTCONS00113665-exon-Sc0000230-1564993656:267352..267491Branchiostoma lanceolatumexon
BlTCONS00113665-exon-Sc0000230-1564993656:267672..267764BlTCONS00113665-exon-Sc0000230-1564993656:267672..267764Branchiostoma lanceolatumexon
BlTCONS00113665-exon-Sc0000230-1564993656:268143..268331BlTCONS00113665-exon-Sc0000230-1564993656:268143..268331Branchiostoma lanceolatumexon
BlTCONS00113665-exon-Sc0000230-1564993656:268574..268717BlTCONS00113665-exon-Sc0000230-1564993656:268574..268717Branchiostoma lanceolatumexon
BlTCONS00113665-exon-Sc0000230-1564993656:268915..269062BlTCONS00113665-exon-Sc0000230-1564993656:268915..269062Branchiostoma lanceolatumexon
BlTCONS00113665-exon-Sc0000230-1564993656:269268..269399BlTCONS00113665-exon-Sc0000230-1564993656:269268..269399Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000230genomeSc0000230:267352..269399 +
Properties
Property NameValue
GeneIDBlCUFF055744