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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000230:48051..51666+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113610 ID=BlTCONS00113610|Name=BlTCONS00113610|organism=Branchiostoma lanceolatum|type=mRNA|length=3616bp|location=Sequence derived from alignment at Sc0000230:48051..51666+ (Branchiostoma lanceolatum)
CAATGAATGGAGGTGGCAAAATAGATATCCGCCGCAGTAGCAACATAAAA
GATATGGCTAAAGTTATCACTGTTTTCGGTGCAACAGGTGAGTTTCCACA
TGTTTTGCAAAATATGGTCGTTGTAGCCTGTATCTAAACTTGGAGCGGGT
GTGCAATTAGGCCGCGAGTGCGTCTTAAGAAACGGTATGGCTCAAGAAGT
TATGAGTGGATTTTTAAGATTGTGTGTGGGTGGTTCTTGACTCAAGAAAA
TACTGATGAGCTAATGAGCTAATAAAACTAAGTAGTATGGAAATGTTTTT
TCTGTCTTTTCATGACAAAAATATAAACTCAACACGAAAGTTCGGAAATT
TGATTTTGGTTGATCATGCATGTCTCAGTGAATACATTCAATTGCATTGC
ATAATATATCAGACCATGCTTATGGTTGGGGGCTGTTGGGAACGTGTTGC
TGCGGTTGGCTGCCGGTCGGCGAGGTTGACTACAGGTCGGCTGCACCAGC
CGAATGTTTCAAAACATTCAAAACCTTCGGGGTGGTTGGCTAATGTGCAT
GGAATAAAACACAAACAATAACAGGCTATTGCGATGCGTGTAGGCATGCT
TATGTTCATGGTTACATTTATATGTATAAAATAAATGAGCCGTCATATTC
TTTAAAGTACATGTATTTGGGCTTTTTTCATGTTTTGACATAACCGCCAA
TGAAATCATAAAAGCACGTGGAAAGCATCAAACAAACAAAACAAGTTGCC
GTACGATGCCTTCACACTTGGGTCTGCACAGGGGCTCAGGGAGGTGGAGT
GGCCAATGCCCTTCTGGAGGACTCGGACTTTCAAGTTCGAGTTGTGACTA
GAAGCGCCTCTAGCGTCAAGGCTCAGGCTCTGCAGGAGAGAGGTGCTGAA
GTCGTTCAGGCCAGTTATGATGACCCCTGCACACTGGGACCGGCACTGCA
GGTAAGACTGTCTGGGATGGAAAATGTCACCCTTATTATCTGTAATTCAG
ATCCTCACTAAACGAACATAACCATGAAAATATGTGTGCCTTGATTGAAT
TCTTTAGCCATGTCTGCTAGCTAAGCCAATTAACAGTGTCCACATTTTCG
TCGACCAGGACGCAGACGGAACGTTTGTGGTGACCAACTACTGGGAACAT
CGAGACTTTGATCGGGCAGTCAAGCAGGTAGGGATTGTTAGACACCAAGA
GAGAAATACCTTTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCG
CGCGTCCCCGTCCAAGGCCTAAAGCAAGGCCTAAAGATAGGTTTCTATTA
ATGTATCGGAAACGCTCCCATACACAGGAAATTTCCATAATATAAGCCAC
TCTAAGGCGTGATTCTTTTACAGGGAGACTGAGTCTTAAACAAACGAGCT
CCAGCTGTTTAGCACATTTATTTAGTTCAGAAAATTATTTCAGTCAATAC
ACGTGAAGCACATTTACTTGTGTTATCAATAGGCAATATACCTCAAACTT
TAGATACCTTACTACTGATTTAATGAGCTAGCATGCCTCTAACTCATTAC
ATCACTAGTAAAAAATCTTTCAATTCCTTACTAGTGATTTAATGAGCTAG
CACGCCTCTAACTTATTAAATCACTAGTAACACTCTTTAAATTCCTTACT
AGTGATTTAATGCGCTAGCATGCCTCTAACTCATTAAATCACCAGTAAGA
AAATCTCTTACAGGTGATTTCAGGAGCCGGCAATATGCCTCTAGTGATTG
CAAACCAGCCAAACTTTCTGTCTCACATGTTTGCGGACTTTTCTTCACTT
TCAGGGTAAAGCGGTCGCGGATGCAGCAAAAGCTGCCGGCGTACAGCACG
TGGTGTTCAGCACTCTCGAGCACGTCCACAAGATCGCGGGATTCCCCGTT
CTGCACTTCGACTCCAAAGCGCTGGTAGAGGAGTATATGACGTCACTCGA
CCTTCCAGTTACTTTCGTCAAGTATCCCTTCTTCTATGAGAACTATCTCA
AGGTCCGCAAGATACGGAAACTGGAGGATGGGACTTACGAGATCGGTACT
GTATACTTCTGAATTATGTATATAAGTACAGTCATCTCGGTTCAGTTCTT
AGCTAACAGATGTCAGAAGACACGATCTTTCATACCCCACCCCATCTAGG
TAACTAATACTTGCAATTATGCAGAAGAAGAAGACCAGGAATATATGCTT
GTTGAATATATGCAAACTAATAGTGCATTTACATTACTTAACGTTGTGTT
TTTAAAGAAACGTCACAACCATATACACTTCACTATATAGATTTGGAAGT
TTCATTCAATGAATCAGAGTTGGTGCAATTCTCCAGGATATCCGATGGAG
GGCGCTGCATTGGATGGCGCCAGTGTTGGTGACCTGGGTTTTGCCATCAG
GGCGATCTTCAGGAACAGGGACCAATGGCTGCACCGGTCTGTCGGCTTTA
GTGCGGACAAGCTGACCATCCAACAACACGCAGAGATTCTGTCCACACAC
CTGGCGCCAAAGGTGTTCAAGGCGACCAAGGTAAGCCTGGGACGACTTTC
TAACAGAATGTGGGCCGAGCGTGGGGGGTAGCATTCATCCATACACACAT
CCATAATCCTTACATACATCCTTGCGTATATATCTTTATATATAAAGAAC
CGTCCCTTCTGTCCACAGATGACCACAGAGAGGTTCTGTAAGCTGGGTTT
CCCGGGAGCTGAGGAACTCGGCAATGGGTTCAAGTTCTGCCGCATCCATA
GCTGTGAGCGCAGCGGTGAGCTGACCCGCCAGCTGTACCCGGCCGTGAGG
AGCTTCGACACGTGGGTGGCTGACAACAAGGAGGCGCTGCTGAACACGCT
GGACTAGATATGACCATGGCATGCAGGCAACTCTGCAAACCATCGTGGTG
TTTTTATTTTTAGGCATTAGGTCATGTTGATTCGATTATATGGATGACAT
CCTCTAGAAACCCCAAAACTGATGGGAGCGTGCGAATAGAAAAAGGTTAG
AAAAACAGAGGTGGCTTCATTATGAAATCCATGTGGTCATGAAGGTTGAA
TAATTGATTCTTAATTTTCATGACTTCATATTTTCTTCTTTCACTTTGCC
GGTAACTTTGAGAACCATCGTGGTATCTTTTTTTAGGTAAAACACACCGG
TTCCAAAAAAGAGGGAGAACGAAGGTGTTTGCTGTGTTGCAATGAATTGT
TATCGACTATAGCCCAGTTTACCTACTAGTTGACTGGGCAAGCAAAAAAG
AATTACTGCTTGCCTAGGAGGTCCGATTGATCTACCATATTTGTTTAAGT
GCACATTTCGAGTAGACCTACCTAAGCCTTTTAACTCACAGGGGTGGCTA
TATGCCTAGGTTTTAAATGCAGCATTCTACATCATTATCAACCTCGTATC
TATCTAGTGTTGCTCAGAGAAAATGTGTATACCTCACTATGTAGTCAAAT
TACAATGGCATTTTCTGACGGGCTCATATGCCCCCAAAAGGACTGAGGTG
GTCATAAAGAAAAGACGTTACATGTGTAAGAGTGCATGGGTTGTTGTCTT
GGAATAAAGAGTACGG Coding sequence (CDS) from alignment at Sc0000230:48051..51666+ >BlTCONS00113610 ID=BlTCONS00113610|Name=BlTCONS00113610|organism=Branchiostoma lanceolatum|type=CDS|length=948bp|location=Sequence derived from alignment at Sc0000230:48051..51666+ (Branchiostoma lanceolatum)
ATGAATGGAGGTGGCAAAATAGATATCCGCCGCAGTAGCAACATAAAAGA
TATGGCTAAAGTTATCACTGTTTTCGGTGCAACAGGGGCTCAGGGAGGTG
GAGTGGCCAATGCCCTTCTGGAGGACTCGGACTTTCAAGTTCGAGTTGTG
ACTAGAAGCGCCTCTAGCGTCAAGGCTCAGGCTCTGCAGGAGAGAGGTGC
TGAAGTCGTTCAGGCCAGTTATGATGACCCCTGCACACTGGGACCGGCAC
TGCAGGACGCAGACGGAACGTTTGTGGTGACCAACTACTGGGAACATCGA
GACTTTGATCGGGCAGTCAAGCAGGGTAAAGCGGTCGCGGATGCAGCAAA
AGCTGCCGGCGTACAGCACGTGGTGTTCAGCACTCTCGAGCACGTCCACA
AGATCGCGGGATTCCCCGTTCTGCACTTCGACTCCAAAGCGCTGGTAGAG
GAGTATATGACGTCACTCGACCTTCCAGTTACTTTCGTCAAGTATCCCTT
CTTCTATGAGAACTATCTCAAGGTCCGCAAGATACGGAAACTGGAGGATG
GGACTTACGAGATCGGATATCCGATGGAGGGCGCTGCATTGGATGGCGCC
AGTGTTGGTGACCTGGGTTTTGCCATCAGGGCGATCTTCAGGAACAGGGA
CCAATGGCTGCACCGGTCTGTCGGCTTTAGTGCGGACAAGCTGACCATCC
AACAACACGCAGAGATTCTGTCCACACACCTGGCGCCAAAGGTGTTCAAG
GCGACCAAGATGACCACAGAGAGGTTCTGTAAGCTGGGTTTCCCGGGAGC
TGAGGAACTCGGCAATGGGTTCAAGTTCTGCCGCATCCATAGCTGTGAGC
GCAGCGGTGAGCTGACCCGCCAGCTGTACCCGGCCGTGAGGAGCTTCGAC
ACGTGGGTGGCTGACAACAAGGAGGCGCTGCTGAACACGCTGGACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113610-exon-Sc0000230-1564993656:48051..48137 | BlTCONS00113610-exon-Sc0000230-1564993656:48051..48137 | Branchiostoma lanceolatum | exon |
| BlTCONS00113610-exon-Sc0000230-1564993656:48832..49001 | BlTCONS00113610-exon-Sc0000230-1564993656:48832..49001 | Branchiostoma lanceolatum | exon |
| BlTCONS00113610-exon-Sc0000230-1564993656:49159..49227 | BlTCONS00113610-exon-Sc0000230-1564993656:49159..49227 | Branchiostoma lanceolatum | exon |
| BlTCONS00113610-exon-Sc0000230-1564993656:49905..50145 | BlTCONS00113610-exon-Sc0000230-1564993656:49905..50145 | Branchiostoma lanceolatum | exon |
| BlTCONS00113610-exon-Sc0000230-1564993656:50437..50630 | BlTCONS00113610-exon-Sc0000230-1564993656:50437..50630 | Branchiostoma lanceolatum | exon |
| BlTCONS00113610-exon-Sc0000230-1564993656:50769..51666 | BlTCONS00113610-exon-Sc0000230-1564993656:50769..51666 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000230 | genome | Sc0000230:48051..51666 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055732 |
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