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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000230:267..3295+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113606 ID=BlTCONS00113606|Name=BlTCONS00113606|organism=Branchiostoma lanceolatum|type=mRNA|length=3029bp|location=Sequence derived from alignment at Sc0000230:267..3295+ (Branchiostoma lanceolatum)
CATCTCCGCCGAAGTGGCCAGGCTGGCGGCAAGCCTCGCCAACAAGACGG
AGGAGTCGGTTGGGACAACACAAGTACTCCTTGGAGGGGAGTGCAAGTCT
GGGGAATGCAACATAGGTGCGCAACTTGTTTTGCAATGATCATGAAGTTG
TATACTGTCACATAATCAGAGGTGCCTTAGAGCTACAGTAACCAACAATA
TGCATTGAAAGAATGTGAACTGGGCCAGGGGTGACAGTTTCTAGTATTGT
CCTTATCATTCTCTCCGTTTTCCGTTTGAGTTTAGGAGTCATTTTACTTC
TACTGGGCATCAGATTGAACGAGTGCCTGTCTACTTCTTGTACAAAAAGT
GTGAATGATTTTAAGTCATGTCATATCACCAGGTAACCTGATCACAAACT
CCATGGTTCACCACAACATCAAACATCCTGACCAAACCAGCTGGAACGAT
GTCGCCATTGCTGTCCTGAACTCCGGCGGTATCAGGTCCATCATTGACCA
AGGTAGGCACTTATGTGTCACCTCTAACTTCGTACCCACCGACTCTTACT
TTATTGATCAGCGCGTAAATCAAGCACAACTTTGTATGGTGTATTGGGCG
TTAAGAATAACCAATGGGTTTTAAAACACGAATATGAGCTCCGCGGAAGG
ACTAGTCAACATACAATAAGTCATAACAACAGCTTGGCAAATTGTGTACG
ACACAGACTTTCAAACAAAACGTCATATGTGGTCACATGCGTACACCTAA
TATGATATAAGGGTTTGTCTTACGTTGATGAATCAGCCCATCTTAACATG
CAAAGTAAGGTAGCAAATCCATAGACAGAACCACTGGTAGAATTCAGTTA
ACTTTGTTTGACCCCCACGTCCACGCTGACTGTTCAACCATGACCACGGT
GTAAACATACCAAAGTCTCTATTTGTTGATATATTGAACGGGGTCTTTAC
TGACTGGCGGAAGTTCGGTAGCCACAATGGCAACCAAACTTAATGATCAT
TCAGGTGCTTCATTATCCTTGGAACAAACAAGTCATGTACTAAATTCAAA
GATGGAGCATGTGCGATACTTATCTTATAACATTATATAGAGGCAATAAA
TGTTAGATATATAATCAAACATTTCGGAAGTAAGTGTATCCATGTAGGTC
CCCTGCTTTCTCCATAAATTGTGTATAAAAAATGAACTTGGTCAATTAAT
TTGTAGGTTCTATCACTGTGGGAGACGTCGTTGGATGCATCCCTTTCGAG
AACACCATAGACATCGTGGAGTTGCGCGGGGAGGATGTGTTACGTATGCT
GGAGCACTCCGCCATCCTTATCGGCCACCCAAGATTCCTGCAAGTCTCTG
GTACGTATACATGTACAGATTTCTATTGGGAATGGTTATCATCATAAATA
ACTGCAAAATATTCTTATACCAACAGCTGTTAACATGGCACAAGGTGCTG
GCCTTGTATAGGAGCCACTTCGATCCAGTTGCCGGTACCTCTCAGATTTG
TTCTGAAAAGCTTCAATGAATAAATAGATAGATGAAATGGTAAGAGACAA
ACACATTTGTTTATTCTGCTTTCAGGTCTCCGCGTGGTGTATGACAAGAC
AAAAGCACCAGGCCACAGAGTGGTGAAAGTAGACGCACTCTGCAGCACCG
GCTGCCTCATCCCGGAGTACCGGCCGCTCGACCCCACCGCCAGCTACAAG
ATCATCATGCCCACGTTCTTGGCAAACGGCGGGGACGGATATAACATGAT
AGCCGAGAACAAGACAGCTCACTATATACCAGGTATGCAACCATCTGTTT
AAGCCCCCATTCCACTAGACGGCGATCTCGCTGCGCTCTCGCTGTGACCT
AAATCGGATTTGTATAACCCTTGCTCCATGATTGGAATATCATGCAAAAG
TATGATCGAAAAGACAACAAAACACACAAAAGCGTAAAGCGATTCATTTT
TTTTAATCTATGAAATTCATTAAGCGCTGTTAATTTTAGGTCGCAGAGAG
CGCGCGGCGAGAGCGCTGTCCTAGTGGAATGGGGGTATAACTAACTGTGC
GTGGTTGGTATGAAGCAAGTGTTAGGAGTAAGCAATTAAGTTAAGTTTGC
TACAACACAGTAAATATTTCTGTCCAACCTACAGGTGACCTTGACACAGA
TATCCTGATTGAGTACATCAAGACCGCCTCACCTGTGTCTGTAGGGCTGG
AGGGACGCATCCGAGTCATCAACTCAACCCAGGAGGAGCCACTGAAGCCC
TGTCCAACCGTGGCAGCATCTTCTACTGGCCACTTTTTCACAACAGGTAC
ATGTCGAGAGTGACTGACATTGGCATGTACGTGTACATGCCACTAGATAC
ATGCCACTAGACACATCTTTTTGTACTCATGCCTTTTGAACAATTCAAAG
TTATTAAGTACAAACACTGACCTTTATGAATGTCTGTTTTCAGATCATGA
TCACGACTTTGAGGACGAACCTGACGACAAGAACATCATCGCCTTAGCCG
TGGGAATCCCTGCCGCTCTGGTCCTAACCATTGCCGTCATAGCCTGTGTG
ATTTGGGGTGTGAAGAGAAGTAGAAACAACTTCACCATGACAAATAGTAA
CCATGGCATGGCCCAAGCAAACCCAGTTTTTGCAATGGAAAAGGGGATAA
ATGGCTAGAACAACCACTAAAAAGGCATTACAACTTGCATTTCTTTATAT
CCACCCATGGACAATGTACTATTAGACTTTGCTGCATGTTCAGTGTCATT
GTCATTACTATTCAAGTCAATTTTGTTTTCCTTACTTTGTTTTGCTGCAA
ACATAACTGTACAATGAAAGTGGTGTGTGTGTGTGTGTGTTTGTGTTCAA
TGTGTGCTTTATGTCTATAGGTATGAATTTAGTCATTGTATGAGCTAGTC
TGGAAGATAACGCTAATGACACAATGTCACAGATGTCAAGTAACAGTATG
TACATCATGACTTTTACACATAAGTTATTGTATTGGTATTAAGTGATTGG
GACAACTGGCATTTTGCCATGTATCATGC Coding sequence (CDS) from alignment at Sc0000230:267..3295+ >BlTCONS00113606 ID=BlTCONS00113606|Name=BlTCONS00113606|organism=Branchiostoma lanceolatum|type=CDS|length=963bp|location=Sequence derived from alignment at Sc0000230:267..3295+ (Branchiostoma lanceolatum)
ATCTCCGCCGAAGTGGCCAGGCTGGCGGCAAGCCTCGCCAACAAGACGGA
GGAGTCGGTTGGGACAACACAAGTACTCCTTGGAGGGGAGTGCAAGTCTG
GGGAATGCAACATAGGTAACCTGATCACAAACTCCATGGTTCACCACAAC
ATCAAACATCCTGACCAAACCAGCTGGAACGATGTCGCCATTGCTGTCCT
GAACTCCGGCGGTATCAGGTCCATCATTGACCAAGGTTCTATCACTGTGG
GAGACGTCGTTGGATGCATCCCTTTCGAGAACACCATAGACATCGTGGAG
TTGCGCGGGGAGGATGTGTTACGTATGCTGGAGCACTCCGCCATCCTTAT
CGGCCACCCAAGATTCCTGCAAGTCTCTGGTCTCCGCGTGGTGTATGACA
AGACAAAAGCACCAGGCCACAGAGTGGTGAAAGTAGACGCACTCTGCAGC
ACCGGCTGCCTCATCCCGGAGTACCGGCCGCTCGACCCCACCGCCAGCTA
CAAGATCATCATGCCCACGTTCTTGGCAAACGGCGGGGACGGATATAACA
TGATAGCCGAGAACAAGACAGCTCACTATATACCAGGTGACCTTGACACA
GATATCCTGATTGAGTACATCAAGACCGCCTCACCTGTGTCTGTAGGGCT
GGAGGGACGCATCCGAGTCATCAACTCAACCCAGGAGGAGCCACTGAAGC
CCTGTCCAACCGTGGCAGCATCTTCTACTGGCCACTTTTTCACAACAGAT
CATGATCACGACTTTGAGGACGAACCTGACGACAAGAACATCATCGCCTT
AGCCGTGGGAATCCCTGCCGCTCTGGTCCTAACCATTGCCGTCATAGCCT
GTGTGATTTGGGGTGTGAAGAGAAGTAGAAACAACTTCACCATGACAAAT
AGTAACCATGGCATGGCCCAAGCAAACCCAGTTTTTGCAATGGAAAAGGG
GATAAATGGCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113606-exon-Sc0000230-1564993656:267..382 | BlTCONS00113606-exon-Sc0000230-1564993656:267..382 | Branchiostoma lanceolatum | exon |
| BlTCONS00113606-exon-Sc0000230-1564993656:649..768 | BlTCONS00113606-exon-Sc0000230-1564993656:649..768 | Branchiostoma lanceolatum | exon |
| BlTCONS00113606-exon-Sc0000230-1564993656:1473..1616 | BlTCONS00113606-exon-Sc0000230-1564993656:1473..1616 | Branchiostoma lanceolatum | exon |
| BlTCONS00113606-exon-Sc0000230-1564993656:1842..2048 | BlTCONS00113606-exon-Sc0000230-1564993656:1842..2048 | Branchiostoma lanceolatum | exon |
| BlTCONS00113606-exon-Sc0000230-1564993656:2401..2562 | BlTCONS00113606-exon-Sc0000230-1564993656:2401..2562 | Branchiostoma lanceolatum | exon |
| BlTCONS00113606-exon-Sc0000230-1564993656:2710..3295 | BlTCONS00113606-exon-Sc0000230-1564993656:2710..3295 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000230 | genome | Sc0000230:267..3295 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055728 |
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